RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 EFCAB11Q9BUY7 163 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 STUB1Q9UNE7 303 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 C2orf78A6NCI8 922 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 MANSC4A6NHS7 340 aaPredicted RBP10.1□□□□□ -0.79
USB1-212ENST00000566082 J3KTA2 159 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 PCDH17O14917 1159 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 MRPS14O60783 128 aaKnown RBP10.1□□□□□ -0.79
USB1-212ENST00000566082 SAGP10523 405 aaPredicted RBP10.1□□□□□ -0.79
USB1-212ENST00000566082 TIA1P31483 386 aaKnown RBP eCLIP10.1□□□□□ -0.791e-11■■■■■ 33
USB1-212ENST00000566082 SUOXP51687 545 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 CLCN7P51798 805 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 SMSP52788 366 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 NKX3-2P78367 333 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 PRKCDQ05655 676 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 PCDH1Q08174 1060 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 LRIT3Q3SXY7 679 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 LEXMQ3ZCV2 418 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 SPRYD7Q5W111 196 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 CYHR1Q6ZMK1 362 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 RASSF6Q6ZTQ3 369 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 GDPD3Q7L5L3 318 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 LAX1Q8IWV1 398 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 DCAF4L2Q8NA75 395 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 OR8J1Q8NGP2 316 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 HUS1BQ8NHY5 278 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 NEIL3Q8TAT5 605 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 NELL2Q99435 816 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 NTMT1Q9BV86 223 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 KCNN2Q9H2S1 579 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 RNF121Q9H920 327 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 NMNAT1Q9HAN9 279 aaPredicted RBP10.1□□□□□ -0.79
USB1-212ENST00000566082 ELOVL2Q9NXB9 296 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 EXTL2Q9UBQ6 330 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 PSORS1C1Q9UIG5 152 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 ZNF225Q9UK10 706 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 OR1F1O43749 312 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 TOXO94900 526 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 ALPPL2P10696 532 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 VEZF1Q14119 521 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 NDUFAF6Q330K2 333 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 SLC16A12Q6ZSM3 486 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 DNAJB7Q7Z6W7 309 aaPredicted RBP10.1□□□□□ -0.79
USB1-212ENST00000566082 VWA5B2Q8N398 1253 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 ATP6V1C2Q8NEY4 427 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 MSANTD3Q96H12 275 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 NECTIN4Q96NY8 510 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 HCN2Q9UL51 889 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 DRGXA6NNA5 263 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 WWP2O00308 870 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 PITPNM1O00562 1244 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 ARHGAP33O14559 1287 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 SCAMP2O15127 329 aaKnown RBP10.1□□□□□ -0.79
USB1-212ENST00000566082 GRM6O15303 877 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 AKAP8O43823 692 aaKnown RBP10.1□□□□□ -0.79
USB1-212ENST00000566082 HLA-DPB1P04440 258 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 RPN2P04844 631 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 SLC10A3P09131 477 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 AMD1P17707 334 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 SLC11A1P49279 550 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 ZNF81P51508 661 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 ADAM15Q13444 863 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 XKR4Q5GH76 650 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 KDM4DQ6B0I6 523 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 CHST9Q7L1S5 443 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 PIGXQ8TBF5 258 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 ZBED6CLQ96FA7 236 aaPredicted RBP10.1□□□□□ -0.79
USB1-212ENST00000566082 EPYCQ99645 322 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 OR2AG1Q9H205 316 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 VNN3Q9NY84 501 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 MGAT4BQ9UQ53 548 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 ENPP4Q9Y6X5 453 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 KNL1Q8NG31 2342 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 COL24A1Q17RW2 1714 aa10.1□□□□□ -0.79
USB1-212ENST00000566082 TMEM88BA6NKF7 163 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 CAPN5O15484 640 aaPredicted RBP10.09□□□□□ -0.79
USB1-212ENST00000566082 SMAD6O43541 496 aaKnown RBP10.09□□□□□ -0.79
USB1-212ENST00000566082 KCNK5O95279 499 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 RAB36O95755 333 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 TGM1P22735 817 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 UQCRC1P31930 480 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 SLC9A3P48764 834 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 RAB8AP61006 207 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 EIF4HQ15056 248 aaKnown RBP10.09□□□□□ -0.79
USB1-212ENST00000566082 LIPJQ5W064 366 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 NADSYN1Q6IA69 706 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 SERINC5Q86VE9 423 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 PHC2Q8IXK0 858 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 ADAMTS15Q8TE58 950 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 TANKQ92844 425 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 TRMT61BQ9BVS5 477 aaKnown RBP10.09□□□□□ -0.79
USB1-212ENST00000566082 TTYH1Q9H313 450 aaPredicted RBP10.09□□□□□ -0.79
USB1-212ENST00000566082 PAK6Q9NQU5 681 aaPredicted RBP10.09□□□□□ -0.79
USB1-212ENST00000566082 ENAMQ9NRM1 1142 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 GPR52Q9Y2T5 361 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 CFAP20Q9Y6A4 193 aaKnown RBP10.09□□□□□ -0.79
USB1-212ENST00000566082 TSPAN6O43657 245 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 OAZ2O95190 189 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 CRYZL1O95825 349 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 STAT5AP42229 794 aa10.09□□□□□ -0.79
USB1-212ENST00000566082 FNDC3BQ53EP0 1204 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms