RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 TRIM3O75382 744 aaPredicted RBP16.62■□□□□ 0.25
PTPN21-208ENST00000556564 KLKB1P03952 638 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 BMP8BP34820 402 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 FCHO2Q0JRZ9 810 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 ST3GAL3Q11203 375 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 RIPK1Q13546 671 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 BMP8AQ7Z5Y6 402 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 PYURFQ96I23 114 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 MACROD1Q9BQ69 325 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 FANCFQ9NPI8 374 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 SLC35C2Q9NQQ7 365 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 EMC8O43402 210 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 LDOC1O95751 146 aaPredicted RBP16.62■□□□□ 0.25
PTPN21-208ENST00000556564 FMO3P31513 532 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 FOLR3P41439 243 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 RPS26P62854 115 aaKnown RBP16.62■□□□□ 0.25
PTPN21-208ENST00000556564 KBTBD2Q8IY47 623 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 ZZZ3Q8IYH5 903 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 PIANPQ8IYJ0 282 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 ASB16Q96NS5 453 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 CXorf56Q9H5V9 222 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 CHMP1AQ9HD42 196 aaPredicted RBP16.62■□□□□ 0.25
PTPN21-208ENST00000556564 CPNE7Q9UBL6 633 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 DNAJA1P31689 397 aaKnown RBP16.62■□□□□ 0.25
PTPN21-208ENST00000556564 MADCAM1Q13477 382 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 UBQLNLQ8IYU4 475 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 OR2L2Q8NH16 312 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 PNPLA2Q96AD5 504 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 AKAP8O43823 692 aaKnown RBP16.62■□□□□ 0.25
PTPN21-208ENST00000556564 CXCL10P02778 98 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 XIAPP98170 497 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 KHDC1Q4VXA5 237 aaKnown RBP16.62■□□□□ 0.25
PTPN21-208ENST00000556564 RAET1LQ5VY80 246 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 OR52E8Q6IFG1 317 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 RBM44Q6ZP01 1051 aaKnown RBP16.62■□□□□ 0.25
PTPN21-208ENST00000556564 AURKBQ96GD4 344 aaPredicted RBP16.62■□□□□ 0.25
PTPN21-208ENST00000556564 MYADMQ96S97 322 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 ZNF717Q9BY31 904 aaPredicted RBP16.62■□□□□ 0.25
PTPN21-208ENST00000556564 EBF2Q9HAK2 575 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 ANKMY1Q9P2S6 941 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 ADAMTSL1Q8N6G6 1762 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 A0A1B0GW55 424 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 SOX1O00570 391 aaPredicted RBP16.62■□□□□ 0.25
PTPN21-208ENST00000556564 DUX4L2P0CJ85 424 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 DUX4L3P0CJ86 424 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 DUX4L4P0CJ87 422 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 DUX4L5P0CJ88 424 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 DUX4L6P0CJ89 424 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 DUX4L7P0CJ90 424 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 XRCC1P18887 633 aaPredicted RBP16.62■□□□□ 0.25
PTPN21-208ENST00000556564 CERS1P27544 350 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 NR1H2P55055 460 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 CYBRD1Q53TN4 286 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 TMCO6Q96DC7 493 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 TRIM8Q9BZR9 551 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 FAM192AQ9GZU8 254 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 PELI2Q9HAT8 420 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 DUX4Q9UBX2 424 aa16.62■□□□□ 0.25
PTPN21-208ENST00000556564 EFCAB9A8MZ26 197 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 TBX1O43435 398 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 PDHA2P29803 388 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 ARSFP54793 590 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 C10orf62Q5T681 223 aaPredicted RBP16.61■□□□□ 0.25
PTPN21-208ENST00000556564 FIGNL1Q6PIW4 674 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 SPATC1Q76KD6 591 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 CHST4Q8NCG5 386 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 NKD1Q969G9 470 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 WDR77Q9BQA1 342 aaPredicted RBP16.61■□□□□ 0.25
PTPN21-208ENST00000556564 SCN9AQ15858 1988 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 BCKDHAP12694 445 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 SMAD4Q13485 552 aaKnown RBP16.61■□□□□ 0.25
PTPN21-208ENST00000556564 CDHR3Q6ZTQ4 885 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 AQP11Q8NBQ7 271 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 SLC22A8Q8TCC7 542 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 FBXL8Q96CD0 374 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 RHBDL2Q9NX52 303 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 TAS2R1Q9NYW7 299 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 GRHPRQ9UBQ7 328 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 TYROBPO43914 113 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 FAM189A1O60320 539 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 CSTAP01040 98 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 CLRN1P58418 232 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 TUBB3Q13509 450 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 REEP3Q6NUK4 255 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 USP30Q70CQ3 517 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 SYT11Q9BT88 431 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 PALMDQ9NP74 551 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 B4GALT7Q9UBV7 327 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 PLCL2Q9UPR0 1127 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 C11orf98E9PRG8 122 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 HOXA9P31269 272 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 PPP2R2BQ00005 443 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 LRP8Q14114 963 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 TCEAL6Q6IPX3 200 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 C1orf94Q6P1W5 598 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 OR56A3Q8NH54 315 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 NXPE3Q969Y0 559 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 ADAD1Q96M93 576 aaKnown RBP16.61■□□□□ 0.25
PTPN21-208ENST00000556564 GAL3ST1Q99999 423 aa16.61■□□□□ 0.25
PTPN21-208ENST00000556564 TMED10P49755 219 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms