RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 DNAJC5Q9H3Z4 198 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 TNFRSF19Q9NS68 423 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 TNFRSF10DQ9UBN6 386 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 A0A1B0GVC2 190 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 BTNL10A8MVZ5 291 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 ITM2AO43736 263 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 DGKQP52824 942 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 HTRA3P83110 453 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 CCDC116Q8IYX3 515 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 IRGQQ8WZA9 623 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 PGAM5Q96HS1 289 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 NUSAP1Q9BXS6 441 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 RGCCQ9H4X1 137 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 C2orf72A6NCS6 295 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 TMEM233B4DJY2 109 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 PHC1P78364 1004 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 IL10RBQ08334 325 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 LCP2Q13094 533 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 DEFB110Q30KQ9 67 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 PRAMEF14Q5SWL7 426 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 PRAMEF13Q5VWM6 474 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 KDELC1Q6UW63 502 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 SUV39H2Q9H5I1 410 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 H3BML4 177 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 LILRB3O75022 631 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 NSG1P42857 185 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 FKBP1BP68106 108 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 ARHGAP12Q8IWW6 846 aa16.41■□□□□ 0.22
CACNA1A-253ENST00000637927 CLCA1A8K7I4 914 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 PAQR3Q6TCH7 311 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 OR4N5Q8IXE1 308 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 ZDHHC1Q8WTX9 485 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 CIDECQ96AQ7 238 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 TM9SF3Q9HD45 589 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 TAS2R7Q9NYW3 318 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 PPP4R1LQ9P1A2 415 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 PDE10AQ9Y233 779 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 FBLP22087 321 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 RPS14P62263 151 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 RNF111Q6ZNA4 994 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 RGMAQ96B86 450 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 SDCBP2Q9H190 292 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 GPATCH2Q9NW75 528 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 LCHNA4D1U4 455 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 FAM170BA6NMN3 283 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 MGST1P10620 155 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 CKMT1AP12532 417 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 CHRNB2P17787 502 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 TPTEP56180 551 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 NFE2L1Q14494 772 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 SOWAHAQ2M3V2 549 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 RFTN2Q52LD8 501 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 TMEM69Q5SWH9 247 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 CEACAM20Q6UY09 585 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 HM13Q8TCT9 377 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 BORCS7-ASMTA0A0B4J1R7 106 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 SRRM3A6NNA2 597 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 ORC5O43913 435 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 CHRNA1P02708 482 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 RPLP0P05388 317 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 RAC2P15153 192 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 PRKACGP22612 351 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 OR10G2Q8NGC3 310 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 OR14L1PQ8NHC6 308 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 ATOH1Q92858 354 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 BORCS7Q96B45 105 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 MUC13Q9H3R2 512 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 IL1RAPQ9NPH3 570 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 MAN2B2Q9Y2E5 1009 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 I3L521 148 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 TLX2O43763 284 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 LIMK2P53671 638 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 CRISP3P54108 245 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 GAS6Q14393 721 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 SWT1Q5T5J6 900 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 SHKBP1Q8TBC3 707 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 POLDIP3Q9BY77 421 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 ZNF175Q9Y473 711 aa16.4■□□□□ 0.22
CACNA1A-253ENST00000637927 A0A1W2PQ45 241 aaPredicted RBP16.39■□□□□ 0.22
CACNA1A-253ENST00000637927 A0A1W2PQY0 241 aa16.39■□□□□ 0.22
CACNA1A-253ENST00000637927 RBM47A0AV96 593 aaKnown RBP16.39■□□□□ 0.22
CACNA1A-253ENST00000637927 CD8B2A6NJW9 211 aa16.39■□□□□ 0.22
CACNA1A-253ENST00000637927 CD8BP10966 210 aa16.39■□□□□ 0.22
CACNA1A-253ENST00000637927 AMY2BP19961 511 aa16.39■□□□□ 0.22
CACNA1A-253ENST00000637927 PEX2P28328 305 aa16.39■□□□□ 0.22
CACNA1A-253ENST00000637927 HNRNPABQ99729 332 aaKnown RBP16.39■□□□□ 0.22
CACNA1A-253ENST00000637927 COQ10BQ9H8M1 238 aa16.39■□□□□ 0.22
CACNA1A-253ENST00000637927 SLC7A11Q9UPY5 501 aa16.39■□□□□ 0.22
CACNA1A-253ENST00000637927 ARHGAP23Q9P227 1491 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 CNTN5O94779 1100 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 MAGEA8P43361 318 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 LASP1Q14847 261 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 ZNF674Q2M3X9 581 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 C12orf40Q86WS4 652 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 ZNF775Q96BV0 537 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 C1orf109Q9NX04 203 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 WRAP73Q9P2S5 460 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 KIDINS220Q9ULH0 1771 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 A0A0G2JLL6 359 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms