RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 GANCQ8TET4 914 aa4.55□□□□□ -1.68
LINC00397-202ENST00000606785 BPIFA2Q96DR5 249 aa4.55□□□□□ -1.68
LINC00397-202ENST00000606785 ZNF354BQ96LW1 612 aa4.55□□□□□ -1.68
LINC00397-202ENST00000606785 ZNF396Q96N95 335 aaPredicted RBP4.55□□□□□ -1.68
LINC00397-202ENST00000606785 LPAR4Q99677 370 aa4.55□□□□□ -1.68
LINC00397-202ENST00000606785 SSX3Q99909 188 aa4.55□□□□□ -1.68
LINC00397-202ENST00000606785 LZTS2Q9BRK4 669 aa4.55□□□□□ -1.68
LINC00397-202ENST00000606785 ZPBPQ9BS86 351 aa4.55□□□□□ -1.68
LINC00397-202ENST00000606785 CCM2Q9BSQ5 444 aa4.55□□□□□ -1.68
LINC00397-202ENST00000606785 GANQ9H2C0 597 aa4.55□□□□□ -1.68
LINC00397-202ENST00000606785 PNNQ9H307 717 aaKnown RBP4.55□□□□□ -1.68
LINC00397-202ENST00000606785 BICC1Q9H694 974 aaKnown RBP4.55□□□□□ -1.68
LINC00397-202ENST00000606785 C6orf106Q9H6K1 298 aaPredicted RBP4.55□□□□□ -1.68
LINC00397-202ENST00000606785 COQ10BQ9H8M1 238 aa4.55□□□□□ -1.68
LINC00397-202ENST00000606785 VIPAS39Q9H9C1 493 aa4.55□□□□□ -1.68
LINC00397-202ENST00000606785 DDX28Q9NUL7 540 aaKnown RBP4.55□□□□□ -1.68
LINC00397-202ENST00000606785 COPS7AQ9UBW8 275 aa4.55□□□□□ -1.68
LINC00397-202ENST00000606785 CLIP2Q9UDT6 1046 aa4.55□□□□□ -1.68
LINC00397-202ENST00000606785 TBK1Q9UHD2 729 aa4.55□□□□□ -1.68
LINC00397-202ENST00000606785 ELF5Q9UKW6 265 aaPredicted RBP4.55□□□□□ -1.68
LINC00397-202ENST00000606785 RABL2BQ9UNT1 228 aa4.55□□□□□ -1.68
LINC00397-202ENST00000606785 TMEM110-MUSTN1A8MSY1 372 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 LACTBL1A8MY62 500 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 CLDN3O15551 220 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 EXTL3O43909 919 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 AK1P00568 194 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 ALPLP05186 524 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 GPIP06744 558 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 CT45A8P0DMV1 189 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 CT45A9P0DMV2 189 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 PRDX6P30041 224 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 ADSSP30520 456 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 MAGEA8P43361 318 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 GABPB1Q06547 395 aaPredicted RBP4.54□□□□□ -1.68
LINC00397-202ENST00000606785 PDZK1IP1Q13113 114 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 SRSF9Q13242 221 aaKnown RBP eCLIP4.54□□□□□ -1.68
LINC00397-202ENST00000606785 SGCGQ13326 291 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 KEAP1Q14145 624 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 CT45A2Q5DJT8 189 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 SNRNP48Q6IEG0 339 aaKnown RBP4.54□□□□□ -1.68
LINC00397-202ENST00000606785 TCEAL6Q6IPX3 200 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 TMEM207Q6UWW9 146 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 CEACAM20Q6UY09 585 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 ADGRD2Q7Z7M1 963 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 RBM23Q86U06 439 aaKnown RBP4.54□□□□□ -1.68
LINC00397-202ENST00000606785 AMZ2Q86W34 360 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 SLC43A2Q8N370 569 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 MARVELD2Q8N4S9 558 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 TEX26Q8N6G2 289 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 POC1AQ8NBT0 407 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 GMCL1P1Q8NEA9 526 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 OR13C5Q8NGS8 318 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 OR1L3Q8NH93 324 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 FCAMRQ8WWV6 532 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 CD101Q93033 1021 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 SLC35C1Q96A29 364 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 NEDD4LQ96PU5 975 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 S1PR3Q99500 378 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 PIGQQ9BRB3 760 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 TMEM231Q9H6L2 316 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 INTS9Q9NV88 658 aaKnown RBP4.54□□□□□ -1.68
LINC00397-202ENST00000606785 HACD3Q9P035 362 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 TAAR2Q9P1P5 351 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 RNF7Q9UBF6 113 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 POLKQ9UBT6 870 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 GREB1LQ9C091 1923 aaPredicted RBP4.54□□□□□ -1.68
LINC00397-202ENST00000606785 NCAPD2Q15021 1401 aa4.54□□□□□ -1.68
LINC00397-202ENST00000606785 DISP3Q9P2K9 1392 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 UMODL1Q5DID0 1318 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 A0A087WUV0 522 aaPredicted RBP4.53□□□□□ -1.68
LINC00397-202ENST00000606785 TRBV4-1A0A0J9YWV2 114 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 TMEM89A2RUT3 159 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 CHEK1O14757 476 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 SMAD6O43541 496 aaKnown RBP4.53□□□□□ -1.68
LINC00397-202ENST00000606785 CYTIPO60759 359 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 SAP30O75446 220 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 SCGB2A1O75556 95 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 EDN1P05305 212 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 IGKV2-30P06310 120 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 CEACAM1P13688 526 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 ACKR3P25106 362 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 ITGA3P26006 1051 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 CTNNA2P26232 953 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 MARK3P27448 753 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 NUMBP49757 651 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 CCL11P51671 97 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 CCR4P51679 360 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 GEMP55040 296 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 DCDC1P59894 354 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 CDR2Q01850 454 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 ILF3Q12906 894 aaKnown RBP eCLIP4.53□□□□□ -1.68
LINC00397-202ENST00000606785 PDIA5Q14554 519 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 HEPACAMQ14CZ8 416 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 LRRC37A5PQ49AS3 106 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 RIPPLY2Q5TAB7 128 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 LYPLAL1Q5VWZ2 237 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 FAM159AQ6UWV7 190 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 ARSKQ6UWY0 536 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 CDHR3Q6ZTQ4 885 aa4.53□□□□□ -1.68
LINC00397-202ENST00000606785 TMEM26Q6ZUK4 368 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms