RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 OR51V1Q9H2C8 321 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 RANGRFQ9HD47 186 aaPredicted RBP10.12□□□□□ -0.79
USB1-212ENST00000566082 DOCK5Q9H7D0 1870 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 TRAV19A0A0A6YYK7 116 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 PRMT3O60678 531 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 ZNF623O75123 536 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 POP4O95707 220 aaKnown RBP10.12□□□□□ -0.79
USB1-212ENST00000566082 JUPP14923 745 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 SLC6A4P31645 630 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 GATMP50440 423 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 REEP3Q6NUK4 255 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 SBSNQ6UWP8 590 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 Q6ZVU0 165 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 DNAJC22Q8N4W6 341 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 MEIOBQ8N635 442 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 ZNF433Q8N7K0 673 aaPredicted RBP10.12□□□□□ -0.79
USB1-212ENST00000566082 OR10H4Q8NGA5 316 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 CTRCQ99895 268 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 RHBGQ9H310 441 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 DUSP21Q9H596 190 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 REEP4Q9H6H4 257 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 TMEM138Q9NPI0 162 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 PCDH10Q9P2E7 1040 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 B4GALT6Q9UBX8 382 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 STOML2Q9UJZ1 356 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 KIAA1217Q5T5P2 1943 aa10.12□□□□□ -0.79
USB1-212ENST00000566082 ANKRD34BA5PLL1 514 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 PDPK1O15530 556 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 GJA1P17302 382 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 HOXD10P28358 340 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 MAGEA11P43364 429 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 MASP1P48740 699 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 DGKGP49619 791 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 SELENOWP63302 87 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 MLLT1Q03111 559 aaPredicted RBP10.11□□□□□ -0.79
USB1-212ENST00000566082 CBLBQ13191 982 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 BTG3Q14201 252 aaPredicted RBP10.11□□□□□ -0.79
USB1-212ENST00000566082 RGNQ15493 299 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 CBLL1Q75N03 491 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 SHFQ7M4L6 423 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 CMTM8Q8IZV2 173 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 GATAD2BQ8WXI9 593 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 SMG7Q92540 1137 aaKnown RBP10.11□□□□□ -0.79
USB1-212ENST00000566082 RFKQ969G6 155 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 SLC39A13Q96H72 371 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 LRR1Q96L50 414 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 OR5M11Q96RB7 305 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 ZNF300Q96RE9 604 aaPredicted RBP10.11□□□□□ -0.79
USB1-212ENST00000566082 HDHD5Q9BXW7 423 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 CARS2Q9HA77 564 aaKnown RBP10.11□□□□□ -0.79
USB1-212ENST00000566082 DIABLOQ9NR28 239 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 SLCO3A1Q9UIG8 710 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 N6AMT1Q9Y5N5 214 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 OR2A25A4D2G3 310 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 M0QZQ0 153 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 HOXC13P31276 330 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 PTGS2P35354 604 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 AVPR1BP47901 424 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 STK19P49842 368 aaPredicted RBP10.11□□□□□ -0.79
USB1-212ENST00000566082 RACK1P63244 317 aaKnown RBP10.11□□□□□ -0.79
USB1-212ENST00000566082 RPL6Q02878 288 aaKnown RBP10.11□□□□□ -0.79
USB1-212ENST00000566082 ARHGAP15Q53QZ3 475 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 GTF2IRD2BQ6EKJ0 949 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 ARL9Q6T311 187 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 GTF2IRD2Q86UP8 949 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 IQCHQ86VS3 1027 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 CHCHD4Q8N4Q1 142 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 ZNF366Q8N895 744 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 LKAAEAR1Q8TD35 194 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 SNAPC3Q92966 411 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 ZNF419Q96HQ0 510 aaPredicted RBP10.11□□□□□ -0.79
USB1-212ENST00000566082 SLC35G5Q96KT7 338 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 RTP3Q9BQQ7 232 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 RACGAP1Q9H0H5 632 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 FBXO8Q9NRD0 319 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 NCKAP1Q9Y2A7 1128 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 TTC34A8MYJ7 566 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 E7EQ34 232 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 GFRA2O00451 464 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 ENTPD6O75354 484 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 KHDRBS3O75525 346 aaKnown RBP10.11□□□□□ -0.79
USB1-212ENST00000566082 STC2O76061 302 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 STATHP02808 62 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 HOXD9P28356 352 aaPredicted RBP10.11□□□□□ -0.79
USB1-212ENST00000566082 ERP29P30040 261 aaKnown RBP10.11□□□□□ -0.79
USB1-212ENST00000566082 AKR1D1P51857 326 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 CDH11P55287 796 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 LGALS3BPQ08380 585 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 GNA13Q14344 377 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 MICAQ29983 383 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 MANEALQ5VSG8 457 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 ZDHHC20Q5W0Z9 365 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 PLAG1Q6DJT9 500 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 NCEH1Q6PIU2 408 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 SLC46A3Q7Z3Q1 461 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 TEX26Q8N6G2 289 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 DEDD2Q8WXF8 326 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 ASB15Q8WXK1 588 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 SIPA1Q96FS4 1042 aa10.11□□□□□ -0.79
USB1-212ENST00000566082 AIF1LQ9BQI0 150 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms