RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TMCC2O75069 709 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 GADD45GO95257 159 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 SLC9A3P48764 834 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 CD83Q01151 205 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 ILKQ13418 452 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 C1DQ13901 141 aaKnown RBP17.01■□□□□ 0.31
NUP54-205ENST00000507257 SCARB2Q14108 478 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 TAB1Q15750 504 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 GPR19Q15760 415 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 WDR45BQ5MNZ6 344 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 DDI2Q5TDH0 399 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 LCN1P1Q5VSP4 162 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 SLC30A8Q8IWU4 369 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 YIPF7Q8N8F6 280 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 AQP11Q8NBQ7 271 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 ENKURQ8TC29 256 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 TRMT61AQ96FX7 289 aaKnown RBP17.01■□□□□ 0.31
NUP54-205ENST00000507257 VPS35Q96QK1 796 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 ABCB9Q9NP78 766 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 TOR4AQ9NXH8 423 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 PLEKHB1Q9UF11 243 aaPredicted RBP17.01■□□□□ 0.31
NUP54-205ENST00000507257 OGDHLQ9ULD0 1010 aa17.01■□□□□ 0.31
NUP54-205ENST00000507257 RPL36Q9Y3U8 105 aaKnown RBP17.01■□□□□ 0.31
NUP54-205ENST00000507257 PLXNB3Q9ULL4 1909 aa17■□□□□ 0.31
NUP54-205ENST00000507257 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17■□□□□ 0.31
NUP54-205ENST00000507257 MTMR11A4FU01 709 aa17■□□□□ 0.31
NUP54-205ENST00000507257 H0YIV9 168 aa17■□□□□ 0.31
NUP54-205ENST00000507257 ENTPD6O75354 484 aa17■□□□□ 0.31
NUP54-205ENST00000507257 CCR7P32248 378 aa17■□□□□ 0.31
NUP54-205ENST00000507257 SOX3P41225 446 aa17■□□□□ 0.31
NUP54-205ENST00000507257 PCBP3P57721 371 aaKnown RBP17■□□□□ 0.31
NUP54-205ENST00000507257 VEPH1Q14D04 833 aa17■□□□□ 0.31
NUP54-205ENST00000507257 ZNF630Q2M218 657 aaPredicted RBP17■□□□□ 0.31
NUP54-205ENST00000507257 METAP1DQ6UB28 335 aaPredicted RBP17■□□□□ 0.31
NUP54-205ENST00000507257 GLB1LQ6UWU2 654 aa17■□□□□ 0.31
NUP54-205ENST00000507257 ZNF280BQ86YH2 543 aa17■□□□□ 0.31
NUP54-205ENST00000507257 RASGRP3Q8IV61 690 aa17■□□□□ 0.31
NUP54-205ENST00000507257 PHC2Q8IXK0 858 aa17■□□□□ 0.31
NUP54-205ENST00000507257 SPERTQ8NA61 448 aa17■□□□□ 0.31
NUP54-205ENST00000507257 AP3S1Q92572 193 aa17■□□□□ 0.31
NUP54-205ENST00000507257 TRIM39Q9HCM9 518 aa17■□□□□ 0.31
NUP54-205ENST00000507257 ATP13A2Q9NQ11 1180 aa17■□□□□ 0.31
NUP54-205ENST00000507257 GPATCH2Q9NW75 528 aa17■□□□□ 0.31
NUP54-205ENST00000507257 ATP6V1HQ9UI12 483 aa17■□□□□ 0.31
NUP54-205ENST00000507257 SLC22A14Q9Y267 594 aa17■□□□□ 0.31
NUP54-205ENST00000507257 IGLV3-16A0A075B6K0 115 aa17■□□□□ 0.31
NUP54-205ENST00000507257 A0A0X1KG70 313 aa17■□□□□ 0.31
NUP54-205ENST00000507257 TLR4O00206 839 aa17■□□□□ 0.31
NUP54-205ENST00000507257 SMAD6O43541 496 aaKnown RBP17■□□□□ 0.31
NUP54-205ENST00000507257 SOCS5O75159 536 aa17■□□□□ 0.31
NUP54-205ENST00000507257 OSMP13725 252 aa17■□□□□ 0.31
NUP54-205ENST00000507257 ZNF30P17039 623 aa17■□□□□ 0.31
NUP54-205ENST00000507257 TNFRSF1BP20333 461 aa17■□□□□ 0.31
NUP54-205ENST00000507257 SGSHP51688 502 aa17■□□□□ 0.31
NUP54-205ENST00000507257 AP2S1P53680 142 aaPredicted RBP17■□□□□ 0.31
NUP54-205ENST00000507257 RAB25P57735 213 aa17■□□□□ 0.31
NUP54-205ENST00000507257 RAE1P78406 368 aaKnown RBP17■□□□□ 0.31
NUP54-205ENST00000507257 GPR17Q13304 367 aa17■□□□□ 0.31
NUP54-205ENST00000507257 ARHGEF6Q15052 776 aa17■□□□□ 0.31
NUP54-205ENST00000507257 OCLNQ16625 522 aa17■□□□□ 0.31
NUP54-205ENST00000507257 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17■□□□□ 0.31
NUP54-205ENST00000507257 C12orf73Q69YU5 71 aa17■□□□□ 0.31
NUP54-205ENST00000507257 PLET1Q6UQ28 207 aa17■□□□□ 0.31
NUP54-205ENST00000507257 TPGS1Q6ZTW0 290 aa17■□□□□ 0.31
NUP54-205ENST00000507257 DENND1CQ8IV53 801 aa17■□□□□ 0.31
NUP54-205ENST00000507257 OXR1Q8N573 874 aa17■□□□□ 0.31
NUP54-205ENST00000507257 C2orf15Q8WU43 125 aaKnown RBP17■□□□□ 0.31
NUP54-205ENST00000507257 SNAPC3Q92966 411 aa17■□□□□ 0.31
NUP54-205ENST00000507257 GTPBP3Q969Y2 492 aaKnown RBP17■□□□□ 0.31
NUP54-205ENST00000507257 TCF25Q9BQ70 676 aa17■□□□□ 0.31
NUP54-205ENST00000507257 SOSTQ9BQB4 213 aa17■□□□□ 0.31
NUP54-205ENST00000507257 ABCG8Q9H221 673 aa17■□□□□ 0.31
NUP54-205ENST00000507257 C1GALT1Q9NS00 363 aa17■□□□□ 0.31
NUP54-205ENST00000507257 RBFOX1Q9NWB1 397 aaKnown RBP17■□□□□ 0.31
NUP54-205ENST00000507257 FRMPD3Q5JV73 1810 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 DOCK3Q8IZD9 2030 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 A0A1W2PQL4 384 aaPredicted RBP16.99■□□□□ 0.31
NUP54-205ENST00000507257 PITPNM1O00562 1244 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 CPNE3O75131 537 aaKnown RBP16.99■□□□□ 0.31
NUP54-205ENST00000507257 EOMESO95936 686 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 HBQ1P09105 142 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 ACADMP11310 421 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 CPEP16870 476 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 IFNA8P32881 189 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 IRS1P35568 1242 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 MAPK8P45983 427 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 OR1E2P47887 323 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 CSNK1DP48730 415 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 PFN3P60673 137 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 IRF8Q02556 426 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 IKZF1Q13422 519 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 RIN1Q13671 783 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 SPIN4Q56A73 249 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 ZNF628Q5EBL2 1059 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 PLEKHS1Q5SXH7 462 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 ADGRF1Q5T601 910 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 LINGO4Q6UY18 593 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 KLHDC8AQ8IYD2 350 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 SLC34A3Q8N130 599 aa16.99■□□□□ 0.31
NUP54-205ENST00000507257 OR4A15Q8NGL6 344 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms