RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Grap2O89100 322 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Hexim2Q3TVI4 313 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Rnf215Q5SPX3 379 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Sim1Q61045 765 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Ube2q1Q7TSS2 422 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Cep68Q8C0D9 733 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Olfr659Q8VGV6 322 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Gm8229K7N749 213 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Bard1O70445 765 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 P01644 108 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 P01645 108 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 P01646 108 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 P01647 108 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Serpine1P22777 402 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Ptger3P30557 365 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 CcnfP51944 777 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Kcnj13P86046 360 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Gjb5Q02739 271 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Timm8a2Q4FZG7 97 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Cpped1Q8BFS6 312 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Lrch3Q8BVU0 778 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 BtdQ8CIF4 520 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Scamp1Q8K021 338 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Sirt3Q8R104 334 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Batf2Q8R1H8 277 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Pcdhga6Q91XY2 932 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Coro6Q920M5 471 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Fndc8Q9D2H8 321 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Ift22Q9DAI2 185 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 NplQ9DCJ9 320 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Calm4Q9JM83 148 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Asb1Q9WV74 336 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Wdr76A6PWY4 622 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Vmn2r114E9Q281 856 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Ufm1P61961 85 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Smad5P97454 465 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Zfand1Q8BFR6 268 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Prox2Q8BII1 593 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Prokr2Q8K458 381 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Olfr1278Q8VF39 313 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Snx4Q91YJ2 450 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Clcc1Q99LI2 539 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Nudt7Q99P30 236 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Psmd8Q9CX56 353 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 CcniQ9Z2V9 377 aa13.36□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Gm2022A0A1Y7VLT7 144 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Phf11bB4XVQ1 276 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 WarsP32921 481 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 MedagQ14BA6 303 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Tmem102Q3UPR7 509 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Pwwp2aQ69Z61 730 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 C1qtnf6Q6IR41 264 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Fam25cQ8CF02 89 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Tmem168Q91VX9 697 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Elovl6Q920L5 267 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 PyurfQ9D1C3 112 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Zfp84Q9D654 559 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Ptges3lQ9D9A7 131 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Nkx2-4Q9EQM3 354 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 TomtA1Y9I9 258 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Olfr1253A2AUA2 318 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 OgdhlE9Q7L0 1029 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Spdye4cI6XKQ3 339 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 JunP05627 334 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Itgb1P09055 798 aaKnown RBP13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 RhoP15409 348 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Gabra3P26049 492 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Ccr7P47774 378 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 CntfP51642 198 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Snx21Q3UR97 363 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Il1rapQ61730 570 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Olfr1251Q7TQZ3 318 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Kxd1Q80XH1 177 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Ccdc126Q8BIS8 140 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Zcchc3Q8BPK2 400 aaKnown RBP13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Timmdc1Q8BUY5 285 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Piwil4Q8CGT6 848 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Edem1Q925U4 652 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Rassf1Q99MK9 340 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Nek6Q9ES70 313 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Chd5A2A8L1 1946 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Rbbp6P97868 1790 aaKnown RBP13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Il17dA0A0B4J1G4 205 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Faap100A2ACJ2 879 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Trgv2A2J008 116 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 FgaE9PV24 789 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Gm20441G3UYJ7 252 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Ctla2aP12399 137 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Pdx1P52946 284 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 FcamrQ2TB54 535 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Tmem214Q8BM55 687 aaKnown RBP13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Vmn1r185Q8R299 319 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Cys1Q8R4T1 145 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Micu1Q8VCX5 477 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Cbr4Q91VT4 236 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Gstt3Q99L20 241 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Senp8Q9D2Z4 221 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Rpl4Q9D8E6 419 aaKnown RBP13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 Mettl15Q9DCL4 406 aa13.35□□□□□ -0.27
Pcdha1-202ENSMUST00000193839 B4galt6Q9WVK5 382 aa13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms