Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Gm25239-201ENSMUST00000174915 86 ntBASIC38.18■■■■□ 3.7
Sim1Q61045 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
Sim1Q61045 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Sim1Q61045 Gm24109-201ENSMUST00000175489 103 ntBASIC33.36■■■□□ 2.93
Sim1Q61045 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Sim1Q61045 Gm15042-201ENSMUST00000120212 883 ntBASIC32.88■■■□□ 2.85
Sim1Q61045 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Sim1Q61045 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Sim1Q61045 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Sim1Q61045 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Sim1Q61045 Gm15045-201ENSMUST00000117359 883 ntBASIC31.99■■■□□ 2.71
Sim1Q61045 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
Sim1Q61045 Gm23366-201ENSMUST00000175022 89 ntBASIC31.85■■■□□ 2.69
Sim1Q61045 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Sim1Q61045 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.28■■■□□ 2.6
Sim1Q61045 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.04■■■□□ 2.56
Sim1Q61045 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Sim1Q61045 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Sim1Q61045 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.92■■■□□ 2.54
Sim1Q61045 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Sim1Q61045 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Sim1Q61045 Psd-208ENSMUST00000224556 2034 ntBASIC30.7■■■□□ 2.51
Sim1Q61045 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
Sim1Q61045 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Sim1Q61045 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.4■■■□□ 2.46
Sim1Q61045 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.39■■■□□ 2.46
Sim1Q61045 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Sim1Q61045 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Sim1Q61045 Gm25238-201ENSMUST00000174914 89 ntBASIC30.27■■■□□ 2.44
Sim1Q61045 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Sim1Q61045 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Sim1Q61045 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Sim1Q61045 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Sim1Q61045 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.36
Sim1Q61045 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Sim1Q61045 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.67■■■□□ 2.34
Sim1Q61045 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Sim1Q61045 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Sim1Q61045 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.61■■■□□ 2.33
Sim1Q61045 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Sim1Q61045 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Sim1Q61045 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.3
Sim1Q61045 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Sim1Q61045 Gm25262-201ENSMUST00000174934 133 ntBASIC29.32■■■□□ 2.28
Sim1Q61045 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.25■■■□□ 2.27
Sim1Q61045 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.24■■■□□ 2.27
Sim1Q61045 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.22■■■□□ 2.27
Sim1Q61045 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Sim1Q61045 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Sim1Q61045 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Sim1Q61045 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Sim1Q61045 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.96■■■□□ 2.23
Sim1Q61045 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Sim1Q61045 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Sim1Q61045 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.88■■■□□ 2.21
Sim1Q61045 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.85■■■□□ 2.21
Sim1Q61045 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.84■■■□□ 2.21
Sim1Q61045 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Sim1Q61045 Gm26115-201ENSMUST00000175605 87 ntBASIC28.8■■■□□ 2.2
Sim1Q61045 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Sim1Q61045 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.7■■■□□ 2.18
Sim1Q61045 Gm27325-201ENSMUST00000175467 74 ntBASIC28.69■■■□□ 2.18
Sim1Q61045 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Sim1Q61045 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
Sim1Q61045 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Sim1Q61045 Gm8109-201ENSMUST00000194076 746 ntBASIC28.55■■■□□ 2.16
Sim1Q61045 Rab21-202ENSMUST00000218831 843 ntBASIC28.54■■■□□ 2.16
Sim1Q61045 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.54■■■□□ 2.16
Sim1Q61045 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Sim1Q61045 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.49■■■□□ 2.15
Sim1Q61045 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Sim1Q61045 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Sim1Q61045 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Sim1Q61045 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Sim1Q61045 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.31■■■□□ 2.12
Sim1Q61045 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Sim1Q61045 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Sim1Q61045 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Sim1Q61045 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Sim1Q61045 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Sim1Q61045 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Sim1Q61045 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.09■■■□□ 2.09
Sim1Q61045 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Sim1Q61045 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.04■■■□□ 2.08
Sim1Q61045 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Sim1Q61045 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.96■■■□□ 2.07
Sim1Q61045 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Sim1Q61045 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
Sim1Q61045 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Sim1Q61045 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.88■■■□□ 2.05
Sim1Q61045 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.85■■■□□ 2.05
Sim1Q61045 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Sim1Q61045 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.83■■■□□ 2.05
Sim1Q61045 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
Sim1Q61045 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Sim1Q61045 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Sim1Q61045 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sim1Q61045 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Sim1Q61045 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.74■■■□□ 2.03
Sim1Q61045 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms