Protein–RNA interactions for Protein: Q8BFS6

Cpped1, Serine/threonine-protein phosphatase CPPED1, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpped1Q8BFS6 Gm25239-201ENSMUST00000174915 86 ntBASIC36.16■■■■□ 3.38
Cpped1Q8BFS6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Cpped1Q8BFS6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
Cpped1Q8BFS6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Cpped1Q8BFS6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Cpped1Q8BFS6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
Cpped1Q8BFS6 Gm15042-201ENSMUST00000120212 883 ntBASIC31.87■■■□□ 2.69
Cpped1Q8BFS6 Gm24109-201ENSMUST00000175489 103 ntBASIC31.2■■■□□ 2.59
Cpped1Q8BFS6 Gm15045-201ENSMUST00000117359 883 ntBASIC31.19■■■□□ 2.58
Cpped1Q8BFS6 Psd-208ENSMUST00000224556 2034 ntBASIC31.01■■■□□ 2.55
Cpped1Q8BFS6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Cpped1Q8BFS6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Cpped1Q8BFS6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Cpped1Q8BFS6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Cpped1Q8BFS6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Cpped1Q8BFS6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.26■■■□□ 2.43
Cpped1Q8BFS6 Gm23366-201ENSMUST00000175022 89 ntBASIC30.24■■■□□ 2.43
Cpped1Q8BFS6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Cpped1Q8BFS6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Cpped1Q8BFS6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Cpped1Q8BFS6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Cpped1Q8BFS6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Cpped1Q8BFS6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Cpped1Q8BFS6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Cpped1Q8BFS6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Cpped1Q8BFS6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Cpped1Q8BFS6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Cpped1Q8BFS6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Cpped1Q8BFS6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Cpped1Q8BFS6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
Cpped1Q8BFS6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.4■■■□□ 2.3
Cpped1Q8BFS6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Cpped1Q8BFS6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
Cpped1Q8BFS6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.26■■■□□ 2.27
Cpped1Q8BFS6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Cpped1Q8BFS6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Cpped1Q8BFS6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.1■■■□□ 2.25
Cpped1Q8BFS6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Cpped1Q8BFS6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.89■■■□□ 2.22
Cpped1Q8BFS6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Cpped1Q8BFS6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Cpped1Q8BFS6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Cpped1Q8BFS6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.66■■■□□ 2.18
Cpped1Q8BFS6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Cpped1Q8BFS6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Cpped1Q8BFS6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cpped1Q8BFS6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.53■■■□□ 2.16
Cpped1Q8BFS6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.48■■■□□ 2.15
Cpped1Q8BFS6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Cpped1Q8BFS6 Gm25238-201ENSMUST00000174914 89 ntBASIC28.45■■■□□ 2.14
Cpped1Q8BFS6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.41■■■□□ 2.14
Cpped1Q8BFS6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
Cpped1Q8BFS6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Cpped1Q8BFS6 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.35■■■□□ 2.13
Cpped1Q8BFS6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cpped1Q8BFS6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Cpped1Q8BFS6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Cpped1Q8BFS6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Cpped1Q8BFS6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Cpped1Q8BFS6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Cpped1Q8BFS6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Cpped1Q8BFS6 Gm27325-201ENSMUST00000175467 74 ntBASIC27.96■■■□□ 2.07
Cpped1Q8BFS6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.95■■■□□ 2.06
Cpped1Q8BFS6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.9■■■□□ 2.06
Cpped1Q8BFS6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Cpped1Q8BFS6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Cpped1Q8BFS6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Cpped1Q8BFS6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.8■■■□□ 2.04
Cpped1Q8BFS6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.79■■■□□ 2.04
Cpped1Q8BFS6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Cpped1Q8BFS6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.75■■■□□ 2.03
Cpped1Q8BFS6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Cpped1Q8BFS6 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.69■■■□□ 2.02
Cpped1Q8BFS6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.67■■■□□ 2.02
Cpped1Q8BFS6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Cpped1Q8BFS6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Cpped1Q8BFS6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Cpped1Q8BFS6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
Cpped1Q8BFS6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Cpped1Q8BFS6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.6■■■□□ 2.01
Cpped1Q8BFS6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.58■■■□□ 2.01
Cpped1Q8BFS6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Cpped1Q8BFS6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Cpped1Q8BFS6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
Cpped1Q8BFS6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Cpped1Q8BFS6 Rab21-202ENSMUST00000218831 843 ntBASIC27.29■■□□□ 1.96
Cpped1Q8BFS6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Cpped1Q8BFS6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Cpped1Q8BFS6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Cpped1Q8BFS6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Cpped1Q8BFS6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.25■■□□□ 1.95
Cpped1Q8BFS6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Cpped1Q8BFS6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cpped1Q8BFS6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cpped1Q8BFS6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Cpped1Q8BFS6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.17■■□□□ 1.94
Cpped1Q8BFS6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cpped1Q8BFS6 Gm25262-201ENSMUST00000174934 133 ntBASIC27.13■■□□□ 1.93
Cpped1Q8BFS6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Cpped1Q8BFS6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms