RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 EIF1AYO14602 144 aaKnown RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 IRAK2O43187 625 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 PROS1P07225 676 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ATP1B2P14415 290 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 EIF1AXP47813 144 aaKnown RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 RAB5CP51148 216 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 OC90Q02509 493 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 AKR1C8PQ5T2L2 129 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 PRSS55Q6UWB4 352 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ERMP1Q7Z2K6 904 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF572Q7Z3I7 529 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 POGLUT1Q8NBL1 392 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ACDQ96AP0 544 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 DPCDQ9BVM2 203 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 Q9N2J8 555 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ZDHHC18Q9NUE0 388 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 GRHPRQ9UBQ7 328 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 TRAV6A0A075B6T7 132 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF705GA8MUZ8 300 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 VSTM5A8MXK1 200 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 MANBAO00462 879 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 IFNA2P01563 188 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 MT-ND5P03915 603 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 C8AP07357 584 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 PET100P0DJ07 73 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 BCKDHAP12694 445 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 DNAJB1P25685 340 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 UFM1P61960 85 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 GPRC6AQ5T6X5 926 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 KIAA1614Q5VZ46 1190 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 GNPDA2Q8TDQ7 276 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 OSTF1Q92882 214 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 OR51I1Q9H343 314 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 PARPBPQ9NWS1 579 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 FAM120CQ9NX05 1096 aaKnown RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 NLGN3Q9NZ94 848 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 RIPK3Q9Y572 518 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 C9J4A7 227 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 LRRN3E7EW58 273 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 PRKCGP05129 697 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 JUNP05412 331 aaKnown RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ANXA3P12429 323 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 SLC6A6P31641 620 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 EVX2Q03828 476 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 EPGNQ6UW88 154 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ANKRD13BQ86YJ7 626 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ACBD4Q8NC06 268 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 CDKN2AIPNLQ96HQ2 116 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 HSPA12BQ96MM6 686 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 TSSK6Q9BXA6 273 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 LRRN3Q9H3W5 708 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ZBTB26Q9HCK0 441 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 TIGARQ9NQ88 270 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 TMEM45AQ9NWC5 275 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 CDH10Q9Y6N8 788 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 A0A1B0GVT2 93 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 TCRBV7S3A2A0A539 114 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 M0R129 80 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 ALPIP09923 528 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF16P17020 682 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-208ENST00000538570 SLC18A1P54219 525 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 TMBIM6P55061 237 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 PPIGQ13427 754 aaKnown RBP eCLIP9.62□□□□□ -0.875e-7■■■■■ 32.2
COL4A6-208ENST00000538570 CHRNA6Q15825 494 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 DECR1Q16698 335 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 MEP1AQ16819 746 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF630Q2M218 657 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-208ENST00000538570 PDSS1Q5T2R2 415 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 LRRC66Q68CR7 880 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 LRRTM4Q86VH4 590 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF709Q8N972 641 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 MFSD2AQ8NA29 543 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 OR4F6Q8NGB9 312 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 OR4K17Q8NGC6 315 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 OR5T2Q8NGG2 359 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 BIRC7Q96CA5 298 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 RPF2Q9H7B2 306 aaKnown RBP9.62□□□□□ -0.87
COL4A6-208ENST00000538570 TAC3Q9UHF0 121 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 LAMP5Q9UJQ1 280 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 FUOMA2VDF0 154 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 TNFP01375 233 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 AOC1P19801 751 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 RAB39AQ14964 217 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 MYLK3Q32MK0 819 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 SLC10A6Q3KNW5 377 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 DPY19L3Q6ZPD9 716 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 BEND4Q6ZU67 534 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 OTOP2Q7RTS6 562 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 MARVELD2Q8N4S9 558 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 KREMEN2Q8NCW0 462 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 OR7G2Q8NG99 324 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 DDX1Q92499 740 aaKnown RBP9.62□□□□□ -0.87
COL4A6-208ENST00000538570 C3orf49Q96BT1 292 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 TAS2R9Q9NYW1 312 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 CXorf49A8MYA2 514 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-208ENST00000538570 TMEM233B4DJY2 109 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 ZDHHC11BP0C7U3 371 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 GNSP15586 552 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 BDKRB1P46663 353 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 ASTE1Q2TB18 679 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms