RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 SLC28A2O43868 658 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 BCHEP06276 602 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 DDCP20711 480 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 CXCR2P25025 360 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 BMPR1AP36894 532 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 MLLT6P55198 1093 aaPredicted RBP8.49□□□□□ -1.05
RTN4-206ENST00000394611 VSX2P58304 361 aaPredicted RBP8.49□□□□□ -1.05
RTN4-206ENST00000394611 ZNF791Q3KP31 576 aaPredicted RBP8.49□□□□□ -1.05
RTN4-206ENST00000394611 PKDCCQ504Y2 493 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 FAM205BPQ63HN1 556 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 CYHR1Q6ZMK1 362 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 NTAN1Q96AB6 310 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 NIPSNAP1Q9BPW8 284 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 FAM83DQ9H4H8 585 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 PRDM9Q9NQV7 894 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 RTTNQ86VV8 2226 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 F5P12259 2224 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 LOC100509620A0A075B734 347 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 RTCAO00442 366 aaKnown RBP8.49□□□□□ -1.05
RTN4-206ENST00000394611 MID1O15344 667 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 B4GALT3O60512 393 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 C6orf47O95873 294 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 APOC3P02656 99 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 MRPL3P09001 348 aaKnown RBP8.49□□□□□ -1.05
RTN4-206ENST00000394611 PAICSP22234 425 aaKnown RBP8.49□□□□□ -1.05
RTN4-206ENST00000394611 GRK5P34947 590 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 PREPP48147 710 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 CENPAP49450 140 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 RGS6P49758 472 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 HK3P52790 923 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 MC1RQ01726 317 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 PPIGQ13427 754 aaKnown RBP eCLIP8.49□□□□□ -1.05
RTN4-206ENST00000394611 EFR3AQ14156 821 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 TRIM71Q2Q1W2 868 aaKnown RBP8.49□□□□□ -1.05
RTN4-206ENST00000394611 CPZQ66K79 652 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 ANKRD54Q6NXT1 300 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 RNF130Q86XS8 419 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 NAGSQ8N159 534 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 TOP6BLQ8N6T0 577 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 ZNF548Q8NEK5 533 aaPredicted RBP8.49□□□□□ -1.05
RTN4-206ENST00000394611 UBXN10Q96LJ8 280 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 MICU1Q9BPX6 476 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 ANKRA2Q9H9E1 313 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 TREX1Q9NSU2 369 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 MGAT4AQ9UM21 535 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 SLC6A14Q9UN76 642 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 TRBC2A0A5B9 178 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 SOBPA7XYQ1 873 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 MANBAO00462 879 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 PCDH17O14917 1159 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 INSIG1O15503 277 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 CYP17A1P05093 508 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 ADORA3P0DMS8 318 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 NR2F1P10589 423 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 FDXRP22570 491 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 MAPK1P28482 360 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 VIPR1P32241 457 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 OLR1P78380 273 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 SLC3A1Q07837 685 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 STK11Q15831 433 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 GPAT3Q53EU6 434 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 INTS6LQ5JSJ4 861 aaKnown RBP8.49□□□□□ -1.05
RTN4-206ENST00000394611 ARL9Q6T311 187 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 MINDY2Q8NBR6 621 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 DYNC2LI1Q8TCX1 351 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 GGHQ92820 318 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 COL21A1Q96P44 957 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 C11orf54Q9H0W9 315 aaPredicted RBP8.49□□□□□ -1.05
RTN4-206ENST00000394611 TTYH1Q9H313 450 aaPredicted RBP8.49□□□□□ -1.05
RTN4-206ENST00000394611 ZNF385DQ9H6B1 395 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 BRD9Q9H8M2 597 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 REV1Q9UBZ9 1251 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 SEC14L3Q9UDX4 400 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 A0A075B6Q4 140 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 PTGESO14684 152 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 CCNDBP1O95273 360 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 CPNE6O95741 557 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 PTTG1O95997 202 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 NRIP1P48552 1158 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 UGT2B15P54855 530 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 IFITM2Q01629 132 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 CHRNA6Q15825 494 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 VMACQ2NL98 169 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 ADNP2Q6IQ32 1131 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 DHRS4L2Q6PKH6 230 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 IQCHQ86VS3 1027 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 ENTHD1Q8IYW4 607 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 ZBTB2Q8N680 514 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 GALNT11Q8NCW6 608 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 TMEM159Q96B96 161 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 IMP4Q96G21 291 aaKnown RBP8.48□□□□□ -1.05
RTN4-206ENST00000394611 GINS4Q9BRT9 223 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 PRR14Q9BWN1 585 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 GSDMCQ9BYG8 508 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 MUC13Q9H3R2 512 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 MKLN1Q9UL63 735 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 ZFR2Q9UPR6 939 aaKnown RBP8.48□□□□□ -1.05
RTN4-206ENST00000394611 PCDHB5Q9Y5E4 795 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 FAM25EA8MYX2 175 aa8.48□□□□□ -1.05
RTN4-206ENST00000394611 TLR4O00206 839 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms