RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 CRISP1P54107 249 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 ADGRG2Q8IZP9 1017 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 TTC9BQ8N6N2 239 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 SCAMP4Q969E2 229 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 SLAMF8Q9P0V8 285 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 ERVW-1Q9UQF0 538 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 MYADML2A6NDP7 307 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 FKTNO75072 461 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 INHAP05111 366 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 LCKP06239 509 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 MEF2AQ02078 507 aaPredicted RBP16.78■□□□□ 0.28
PTPRU-202ENST00000373779 LMAN2Q12907 356 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 RUNDC3AQ59EK9 446 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 COX18Q8N8Q8 333 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 APIPQ96GX9 242 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 RNF38Q9H0F5 515 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 CPNE5Q9HCH3 593 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 ERVK-11Q9UQG0 969 aa16.78■□□□□ 0.28
PTPRU-202ENST00000373779 DRGXA6NNA5 263 aa16.77■□□□□ 0.28
PTPRU-202ENST00000373779 K7ERQ8 282 aa16.77■□□□□ 0.28
PTPRU-202ENST00000373779 MRPS14O60783 128 aaKnown RBP16.77■□□□□ 0.28
PTPRU-202ENST00000373779 CH25HO95992 272 aa16.77■□□□□ 0.28
PTPRU-202ENST00000373779 MATN1P21941 496 aa16.77■□□□□ 0.28
PTPRU-202ENST00000373779 MAB21L1Q13394 359 aa16.77■□□□□ 0.28
PTPRU-202ENST00000373779 NHSL2Q5HYW2 709 aa16.77■□□□□ 0.28
PTPRU-202ENST00000373779 KIAA0319Q5VV43 1072 aa16.77■□□□□ 0.28
PTPRU-202ENST00000373779 PNCKQ6P2M8 343 aa16.77■□□□□ 0.28
PTPRU-202ENST00000373779 CSF2P04141 144 aa16.77■□□□□ 0.28
PTPRU-202ENST00000373779 ATXN1LP0C7T5 689 aaKnown RBP16.77■□□□□ 0.28
PTPRU-202ENST00000373779 CD40LGP29965 261 aa16.77■□□□□ 0.28
PTPRU-202ENST00000373779 TMEM115Q12893 351 aaPredicted RBP16.77■□□□□ 0.28
PTPRU-202ENST00000373779 LIPKQ5VXJ0 399 aa16.77■□□□□ 0.28
PTPRU-202ENST00000373779 ARMC5Q96C12 935 aa16.77■□□□□ 0.28
PTPRU-202ENST00000373779 BHLHE41Q9C0J9 482 aaPredicted RBP16.77■□□□□ 0.28
PTPRU-202ENST00000373779 EXOSC1Q9Y3B2 195 aaKnown RBP16.77■□□□□ 0.28
PTPRU-202ENST00000373779 FAAHO00519 579 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 CAPN5O15484 640 aaPredicted RBP16.77■□□□□ 0.27
PTPRU-202ENST00000373779 TSPAN6O43657 245 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 REM1O75628 298 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 ST3GAL3Q11203 375 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 TMC8Q8IU68 726 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 CPA6Q8N4T0 437 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 SMPDL3AQ92484 453 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 RSPH9Q9H1X1 276 aaPredicted RBP16.77■□□□□ 0.27
PTPRU-202ENST00000373779 GPN2Q9H9Y4 310 aaPredicted RBP16.77■□□□□ 0.27
PTPRU-202ENST00000373779 MBD2Q9UBB5 411 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 ERI3O43414 337 aaKnown RBP16.77■□□□□ 0.27
PTPRU-202ENST00000373779 AOC2O75106 756 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 PTTG1O95997 202 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 IFI30P13284 250 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 RYKP34925 604 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 MNDAP41218 407 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 LINGO2Q7L985 606 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 FAM124AQ86V42 546 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 ZNF366Q8N895 744 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 IRF2BPLQ9H1B7 796 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 CD300AQ9UGN4 299 aa16.77■□□□□ 0.27
PTPRU-202ENST00000373779 TRBV23OR9-2A0A075B6M9 112 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 C2orf78A6NCI8 922 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 MROH6A6NGR9 719 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 GABBR2O75899 941 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 DPP6P42658 865 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 STK19P49842 368 aaPredicted RBP16.76■□□□□ 0.27
PTPRU-202ENST00000373779 GINS1Q14691 196 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 TAF13Q15543 124 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 PARGQ86W56 976 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 SLAIN1Q8ND83 568 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 B3GNT3Q9Y2A9 372 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 GRIP1Q9Y3R0 1128 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 CLCA1A8K7I4 914 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 INPPL1O15357 1258 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 SEMA3BQ13214 749 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 SLITRK4Q8IW52 837 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 GSDMCQ9BYG8 508 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 IL17CQ9P0M4 197 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 PCDHGB5Q9Y5G0 923 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 RHCEP18577 417 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 SHMT2P34897 504 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 APOFQ13790 326 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 PTGES3Q15185 160 aaKnown RBP16.76■□□□□ 0.27
PTPRU-202ENST00000373779 ARL9Q6T311 187 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 RASSF6Q6ZTQ3 369 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 ASCC1Q8N9N2 400 aaKnown RBP16.76■□□□□ 0.27
PTPRU-202ENST00000373779 SLC37A3Q8NCC5 494 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 ZFP90Q8TF47 636 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 TFGQ92734 400 aaPredicted RBP16.76■□□□□ 0.27
PTPRU-202ENST00000373779 BTBD1Q9H0C5 482 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 ZSCAN32Q9NX65 697 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 EIF3KQ9UBQ5 218 aaKnown RBP16.76■□□□□ 0.27
PTPRU-202ENST00000373779 CFAP20Q9Y6A4 193 aaKnown RBP16.76■□□□□ 0.27
PTPRU-202ENST00000373779 STON1Q9Y6Q2 735 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 LRRC72A6NJI9 287 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 TLL1O43897 1013 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 HCN1O60741 890 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 APODP05090 189 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 ALPLP05186 524 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 LAMP1P11279 417 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 ALDH3B2P48448 385 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 HMBOX1Q6NT76 420 aa16.76■□□□□ 0.27
PTPRU-202ENST00000373779 SLC5A8Q8N695 610 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms