RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 ZNF697Q5TEC3 545 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 XAF1Q6GPH4 301 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 TMEM220Q6QAJ8 160 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 GALNT7Q86SF2 657 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 HMGN2P46Q86SG4 172 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 ZFP41Q8N8Y5 198 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 B3GNT7Q8NFL0 401 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 ADAMTS16Q8TE57 1224 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 PTPN18Q99952 460 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 MRPL9Q9BYD2 267 aaKnown RBP10.15□□□□□ -0.78
USB1-212ENST00000566082 RNF167Q9H6Y7 350 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 MAN2B2Q9Y2E5 1009 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 C12orf71A8MTZ7 269 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 GUCY1B2O75343 617 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 NUDT7P0C024 238 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 BMP7P18075 431 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 TNFSF8P32971 234 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 BDKRB1P46663 353 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 RPL34P49207 117 aaKnown RBP10.15□□□□□ -0.79
USB1-212ENST00000566082 UGT8Q16880 541 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 XKR7Q5GH72 579 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 ATAT1Q5SQI0 421 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 GPRC6AQ5T6X5 926 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 BHLHB9Q6PI77 547 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 TMEM179BQ7Z7N9 219 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 LINC01465Q8N7H1 131 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 PLD4Q96BZ4 506 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 AP2M1Q96CW1 435 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 VMP1Q96GC9 406 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 TSSK6Q9BXA6 273 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 CLMPQ9H6B4 373 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 IL17CQ9P0M4 197 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 NLKQ9UBE8 527 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 GTF2A1LQ9UNN4 478 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 GRIP1Q9Y3R0 1128 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 CNTRLQ7Z7A1 2325 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 PCNTO95613 3336 aa10.15□□□□□ -0.79
USB1-212ENST00000566082 CLDN24A6NM45 220 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 QSOX1O00391 747 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 AXIN1O15169 862 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 SLC16A6O15403 523 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 B3GALT4O96024 378 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 EIF2DP41214 584 aaKnown RBP10.14□□□□□ -0.79
USB1-212ENST00000566082 CCL23P55773 120 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 YBX1P67809 324 aaKnown RBP10.14□□□□□ -0.79
USB1-212ENST00000566082 SLC35A2P78381 396 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 SYT6Q5T7P8 510 aaPredicted RBP10.14□□□□□ -0.79
USB1-212ENST00000566082 SMARCD3Q6STE5 483 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 CADM2Q8N3J6 435 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 C10orf53Q8N6V4 93 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 GPR151Q8TDV0 419 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 SLC9A6Q92581 669 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 SCAMP4Q969E2 229 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 WRAP53Q9BUR4 548 aaKnown RBP10.14□□□□□ -0.79
USB1-212ENST00000566082 BEX1Q9HBH7 125 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 MICAL3Q7RTP6 2002 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 PQBP1O60828 265 aaKnown RBP10.14□□□□□ -0.79
USB1-212ENST00000566082 JRKO75564 520 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 CDK1P06493 297 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 PCSK2P16519 638 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 CRISP1P54107 249 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 MLLT10P55197 1068 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 RPS26P62854 115 aaKnown RBP10.14□□□□□ -0.79
USB1-212ENST00000566082 KLHL22Q53GT1 634 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 C9orf64Q5T6V5 341 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 MTSS1LQ765P7 747 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 CCDC28AQ8IWP9 274 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 KLHDC9Q8NEP7 349 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 OR52L1Q8NGH7 329 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 GGHQ92820 318 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 ARMC5Q96C12 935 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 COQ3Q9NZJ6 369 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 A0A1B0GW55 424 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 A0A1W2PQ09 198 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 A0A1W2PQL4 384 aaPredicted RBP10.14□□□□□ -0.79
USB1-212ENST00000566082 MEIOCA2RUB1 952 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 ARHGEF33A8MVX0 844 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 WASH4PA8MWX3 477 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 CENPBD1B2RD01 187 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 NEDD8-MDP1E9PL57 170 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 PCDHGA12O60330 932 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 OR5F1O95221 314 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 PTHP01270 115 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 DUX4L2P0CJ85 424 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 DUX4L3P0CJ86 424 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 DUX4L4P0CJ87 422 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 DUX4L5P0CJ88 424 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 DUX4L6P0CJ89 424 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 DUX4L7P0CJ90 424 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 CELP19835 753 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 CPN2P22792 545 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 EPHA2P29317 976 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 GGT2P36268 569 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 MAP2K3P46734 347 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 FLT3LGP49771 235 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 RING1Q06587 406 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 DOC2AQ14183 400 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 CTF1Q16619 201 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 PRR23CQ6ZRP0 262 aa10.14□□□□□ -0.79
USB1-212ENST00000566082 CXXC5Q7LFL8 322 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms