RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 RHDQ02161 417 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 FXNQ16595 210 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 SIRPB2Q5JXA9 342 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 TMEM236Q5W0B7 351 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ZDHHC24Q6UX98 284 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 NTAN1Q96AB6 310 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 KLRG1Q96E93 195 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 OR2M4Q96R27 311 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 OR52B2Q96RD2 323 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 TTYH3Q9C0H2 523 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF358Q9NW07 568 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 SLITRK5O94991 958 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 UQCRC1P31930 480 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 DGKQP52824 942 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 HERV-K104P61576 105 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 CDK10Q15131 360 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 SPARTQ8N0X7 666 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ENDOVQ8N8Q3 282 aaKnown RBP9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ASPNQ9BXN1 380 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 PPA2Q9H2U2 334 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 TAS2R10Q9NYW0 307 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 SIRPGQ9P1W8 387 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ZDHHC2Q9UIJ5 367 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 SCP2D1Q9UJQ7 156 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 SH2B3Q9UQQ2 575 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF705FA8MVS1 300 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-208ENST00000538570 CH25HO95992 272 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 IFNA17P01571 189 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF705DP0CH99 300 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF705BP0CI00 300 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ACP5P13686 325 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 GSK3BP49841 420 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 WDR4P57081 412 aaKnown RBP9.64□□□□□ -0.87
COL4A6-208ENST00000538570 SPATS1Q496A3 300 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ARSIQ5FYB1 569 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 SH3PXD2AQ5TCZ1 1133 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 CEACAM20Q6UY09 585 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 PIAS4Q8N2W9 510 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ALPK1Q96QP1 1244 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 C1orf21Q9H246 121 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 UFSP2Q9NUQ7 469 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 INPPL1O15357 1258 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 TLX2O43763 284 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-208ENST00000538570 AGXTP21549 392 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 PLGLB1Q02325 96 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 SEMG2Q02383 582 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 DSG2Q14126 1118 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 PCBP2Q15366 365 aaKnown RBP eCLIP9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF773Q6PK81 442 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ENPP7Q6UWV6 458 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ARSKQ6UWY0 536 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 NAPRTQ6XQN6 538 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 THOC6Q86W42 341 aaKnown RBP9.64□□□□□ -0.87
COL4A6-208ENST00000538570 SHKBP1Q8TBC3 707 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 SLC5A7Q9GZV3 580 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 BTBD1Q9H0C5 482 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 ENAMQ9NRM1 1142 aa9.64□□□□□ -0.87
COL4A6-208ENST00000538570 FAM159BA6NKW6 160 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 MAFKO60675 156 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 SLC19A2O60779 497 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 CREG1O75629 220 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ACTR1BP42025 376 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 CD97P48960 835 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ACTR1AP61163 376 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 AIMP2Q13155 320 aaKnown RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 AMZ1Q400G9 498 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 HSDL2Q6YN16 418 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 GOLGA7Q7Z5G4 137 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 FAM46DQ8NEK8 389 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 OR56A1Q8NGH5 318 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 THRSPQ92748 146 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 HSH2DQ96JZ2 352 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 BIRC8Q96P09 236 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 CARS2Q9HA77 564 aaKnown RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 EXOSC1Q9Y3B2 195 aaKnown RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 CIB4A0PJX0 185 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 DLGAP1O14490 977 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 TNFRSF10BO14763 440 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 POLR1CO15160 346 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 DFNA5O60443 496 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ABCB7O75027 752 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 DUSP11O75319 330 aaKnown RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 TGM6O95932 706 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 SLURP2P0DP57 97 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 SNHG28P0DPA3 235 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ELNP15502 786 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 NCBP2-AS2Q69YL0 99 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ZSCAN4Q8NAM6 433 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 FUBP3Q96I24 572 aaKnown RBP eCLIP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 ORAI3Q9BRQ5 295 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 RGCCQ9H4X1 137 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 TM9SF3Q9HD45 589 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 GSKIPQ9P0R6 139 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 HCN2Q9UL51 889 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 SLC22A14Q9Y267 594 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 A0A1B0GVI7 797 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 A0A1W2PQ45 241 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-208ENST00000538570 A0A1W2PQY0 241 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 OR6C65A6NJZ3 312 aa9.63□□□□□ -0.87
COL4A6-208ENST00000538570 E9PI62 339 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms