RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 FPR1P21462 350 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 TGM1P22735 817 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 KDELR2P33947 212 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 CNR2P34972 360 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 RORCP51449 518 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 E2F2Q14209 437 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 KRT33BQ14525 404 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 MARCH8Q5T0T0 291 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 OR2G6Q5TZ20 316 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 OTUD1Q5VV17 481 aaPredicted RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 ZNF691Q5VV52 312 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 SUSD1Q6UWL2 747 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 COQ8AQ8NI60 647 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 FERD3LQ96RJ6 166 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 MCMBPQ9BTE3 642 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 YTHDF1Q9BYJ9 559 aaKnown RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 CRISPLD2Q9H0B8 497 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 SEMA3GQ9NS98 782 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 ZIM2Q9NZV7 527 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 GLOD5A6NK44 160 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 ZNF701M0R085 212 aaPredicted RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 NARSO43776 548 aaKnown RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 NR2F6P10588 404 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 EN2P19622 333 aaPredicted RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 DGKAP23743 735 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 TIE1P35590 1138 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 HNRNPFP52597 415 aaKnown RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 MAZP56270 477 aaKnown RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 LGALS3BPQ08380 585 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 TATDN3Q17R31 274 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 SLC35F1Q5T1Q4 408 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 C10orf111Q8N326 155 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 HJURPQ8NCD3 748 aaPredicted RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 B3GNT7Q8NFL0 401 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 OR10T2Q8NGX3 314 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 OR51B5Q9H339 312 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 OSGEPL1Q9H4B0 414 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 CPNE5Q9HCH3 593 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 NECTIN3Q9NQS3 549 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 CCDC59Q9P031 241 aaKnown RBP8.51□□□□□ -1.05
RTN4-206ENST00000394611 MUTYHQ9UIF7 546 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 SCN10AQ9Y5Y9 1956 aa8.51□□□□□ -1.05
RTN4-206ENST00000394611 PRRG1O14668 218 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 ENPEPQ07075 957 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 ABHD18Q0P651 414 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 SLC9A5Q14940 896 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 ATXN7L3Q14CW9 347 aaPredicted RBP8.5□□□□□ -1.05
RTN4-206ENST00000394611 RPS26P11Q5JNZ5 115 aaPredicted RBP8.5□□□□□ -1.05
RTN4-206ENST00000394611 GDF6Q6KF10 455 aaPredicted RBP8.5□□□□□ -1.05
RTN4-206ENST00000394611 LAPTM4BQ86VI4 370 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 DNAJB8Q8NHS0 232 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 C12orf66Q96MD2 445 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 AKIP1Q9NQ31 210 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 CDH7Q9ULB5 785 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 ING4Q9UNL4 249 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 KMOO15229 486 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 GMFGO60234 142 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 TBL1XO60907 577 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 OR5F1O95221 314 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 RLN1P04808 185 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 LAMP1P11279 417 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 SDC2P34741 201 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 SLC19A1P41440 591 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 ODF4Q2M2E3 257 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 DDX53Q86TM3 631 aaKnown RBP8.5□□□□□ -1.05
RTN4-206ENST00000394611 MARCH9Q86YJ5 346 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 PAPD5Q8NDF8 572 aaKnown RBP8.5□□□□□ -1.05
RTN4-206ENST00000394611 ATOH8Q96SQ7 321 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 MRPL9Q9BYD2 267 aaKnown RBP8.5□□□□□ -1.05
RTN4-206ENST00000394611 OR51V1Q9H2C8 321 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 EVA1BQ9NVM1 165 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 GSTK1Q9Y2Q3 226 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 PITPNM1O00562 1244 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 OR7A10O76100 309 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 GABARAPO95166 117 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 NOS3P29474 1203 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 MAP4K2Q12851 820 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 SLC14A1Q13336 389 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 ZBTB6Q15916 424 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 BAK1Q16611 211 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 ZNF181Q2M3W8 571 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 MS4A13Q5J8X5 152 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 TRAPPC5Q8IUR0 188 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 PIAS4Q8N2W9 510 aaPredicted RBP8.5□□□□□ -1.05
RTN4-206ENST00000394611 C11orf65Q8NCR3 313 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 CEP76Q8TAP6 659 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 PAWRQ96IZ0 340 aaKnown RBP8.5□□□□□ -1.05
RTN4-206ENST00000394611 MAGEB10Q96LZ2 347 aaPredicted RBP8.5□□□□□ -1.05
RTN4-206ENST00000394611 DUSP26Q9BV47 211 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 POLR2J3Q9H1A7 115 aaKnown RBP8.5□□□□□ -1.05
RTN4-206ENST00000394611 VPS9D1Q9Y2B5 631 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 CCDC88CQ9P219 2028 aa8.5□□□□□ -1.05
RTN4-206ENST00000394611 LCHNA4D1U4 455 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 TARM1B6A8C7 271 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 INMT-MINDY4F8WBC2 141 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 SLC28A1O00337 649 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 PDPK1O15530 556 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 EEF1E1O43324 174 aaKnown RBP8.49□□□□□ -1.05
RTN4-206ENST00000394611 FRS3O43559 492 aa8.49□□□□□ -1.05
RTN4-206ENST00000394611 HYAL3O43820 417 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms