RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Cdkl1Q8CEQ0 352 aa14.19□□□□□ -0.14
Nup88-202ENSMUST00000108530 Prmt5Q8CIG8 637 aa14.19□□□□□ -0.14
Nup88-202ENSMUST00000108530 Nudt13Q8JZU0 352 aa14.19□□□□□ -0.14
Nup88-202ENSMUST00000108530 Spin4Q8K1L2 249 aa14.19□□□□□ -0.14
Nup88-202ENSMUST00000108530 EtfaQ99LC5 333 aaKnown RBP14.19□□□□□ -0.14
Nup88-202ENSMUST00000108530 Slc52a3Q9D6X5 460 aa14.19□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ift46Q9DB07 301 aa14.19□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ube4bQ9ES00 1173 aa14.19□□□□□ -0.14
Nup88-202ENSMUST00000108530 DguokQ9QX60 277 aa14.19□□□□□ -0.14
Nup88-202ENSMUST00000108530 NsdhlQ9R1J0 362 aa14.19□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ehd1Q9WVK4 534 aaKnown RBP14.19□□□□□ -0.14
Nup88-202ENSMUST00000108530 Chek2Q9Z265 546 aa14.19□□□□□ -0.14
Nup88-202ENSMUST00000108530 Rai1Q61818 1889 aa14.19□□□□□ -0.14
Nup88-202ENSMUST00000108530 A0A1L1ST33 502 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Gm5938A2AEN9 163 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Gm6811E9Q3Y8 510 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Angpt2O35608 496 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Socs2O35717 198 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 DgkaO88673 730 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Mcpt2P15119 244 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Crhr1P35347 415 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Slc30a3P97441 388 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Larp7Q05CL8 570 aaKnown RBP14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Eps8Q08509 821 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 D17Wsu92eQ3TT38 291 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Itpripl2Q3UV16 535 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Pdp2Q504M2 532 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Cr1lQ64735 483 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ppp1r3eQ8BRJ4 279 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Stx19Q8R1Q0 292 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Vmn1r234Q8R298 329 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Frmd4bQ920B0 1035 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 MtapQ9CQ65 283 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 AgtrapQ9WVK0 161 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Col6a3E9PWQ3 3284 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ascc3E9PZJ8 2198 aaKnown RBP14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Gm30302A0A1Y7VN40 1110 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Actl10A2AKE7 346 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Gm14139F6ZS36 494 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Zfp934K7N6H3 473 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Vmn2r97K7N6Z2 861 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Vmn2r93L7N1Z9 857 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Mtnd5P03921 607 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 H2-Q8P14430 326 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 P18533 117 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Prim2P33610 505 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Defa-rs12P50716 91 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Stard6P59096 233 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Serpina7P61939 418 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 H2-Q6P79568 326 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Rad51Q08297 339 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Trim67Q505D9 768 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Zfp280bQ505F4 534 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Tspan14Q8QZY6 270 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Impa2Q91UZ5 290 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Fitm1Q91V79 292 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Q91W34 466 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Crtc3Q91X84 619 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 BniplQ99JU7 328 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Dcdc2cQ9D1B8 347 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Fam174aQ9D3L0 190 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Il23aQ9EQ14 196 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Clca3a2Q9EQR4 902 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ern1Q9EQY0 977 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 TescQ9JKL5 214 aa14.18□□□□□ -0.14
Nup88-202ENSMUST00000108530 Vmn2r12L7N217 831 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Gsk3aQ2NL51 490 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 RflnbQ5SVD0 216 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 MogQ61885 246 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Cypt4Q6P925 153 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Mfsd13aQ6PDE8 519 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 CebpeQ6PZD9 281 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Adamtsl2Q7TSK7 957 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Psd4Q8BLR5 1005 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Cars2Q8BYM8 551 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Atp6v1b1Q91YH6 513 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Cyp4f3Q99N16 524 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Klhl35Q9CZ49 574 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Olfr705Q9EPF7 316 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Inpp5eQ9JII1 647 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Slfn3A0A1L1STQ7 640 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 1700023F06RikA2AB62 382 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Rab11fip2G3XA57 512 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Mfsd4b4J3QNS5 503 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Gh1P06880 216 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Fcgr3P08508 261 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Slc37a3Q3TIT8 494 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 4930438A08RikQ5SPH3 536 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Letm2Q7TNU7 480 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Pced1bQ8BGX1 433 aaKnown RBP14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Cyp20a1Q8BKE6 462 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ddx52Q8K301 598 aaKnown RBP14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Gstm4Q8R5I6 218 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Ing3Q8VEK6 421 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Olfr811Q8VFI1 319 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Med21Q9CQ39 144 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Q9D1Z2 194 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 RpgrQ9R0X5 1001 aa14.17□□□□□ -0.14
Nup88-202ENSMUST00000108530 Adh6bA0A1D5RMB0 384 aa14.16□□□□□ -0.14
Nup88-202ENSMUST00000108530 Cytl1A1E5L0 139 aa14.16□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms