Protein–RNA interactions for Protein: Q8R298

Vmn1r234, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r234Q8R298 Gm25239-201ENSMUST00000174915 86 ntBASIC33.72■■■□□ 2.99
Vmn1r234Q8R298 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Vmn1r234Q8R298 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Vmn1r234Q8R298 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
Vmn1r234Q8R298 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Vmn1r234Q8R298 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Vmn1r234Q8R298 Psd-208ENSMUST00000224556 2034 ntBASIC30.47■■■□□ 2.47
Vmn1r234Q8R298 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Vmn1r234Q8R298 Gm15042-201ENSMUST00000120212 883 ntBASIC30.13■■■□□ 2.41
Vmn1r234Q8R298 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Vmn1r234Q8R298 Gm15045-201ENSMUST00000117359 883 ntBASIC29.61■■■□□ 2.33
Vmn1r234Q8R298 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Vmn1r234Q8R298 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Vmn1r234Q8R298 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.45■■■□□ 2.3
Vmn1r234Q8R298 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Vmn1r234Q8R298 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Vmn1r234Q8R298 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Vmn1r234Q8R298 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Vmn1r234Q8R298 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Vmn1r234Q8R298 Gm24109-201ENSMUST00000175489 103 ntBASIC28.95■■■□□ 2.22
Vmn1r234Q8R298 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Vmn1r234Q8R298 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Vmn1r234Q8R298 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Vmn1r234Q8R298 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Vmn1r234Q8R298 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Vmn1r234Q8R298 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.17
Vmn1r234Q8R298 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.61■■■□□ 2.17
Vmn1r234Q8R298 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Vmn1r234Q8R298 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Vmn1r234Q8R298 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Vmn1r234Q8R298 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.37■■■□□ 2.13
Vmn1r234Q8R298 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Vmn1r234Q8R298 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Vmn1r234Q8R298 Gm23366-201ENSMUST00000175022 89 ntBASIC28.24■■■□□ 2.11
Vmn1r234Q8R298 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Vmn1r234Q8R298 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Vmn1r234Q8R298 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Vmn1r234Q8R298 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Vmn1r234Q8R298 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Vmn1r234Q8R298 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Vmn1r234Q8R298 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
Vmn1r234Q8R298 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.93■■■□□ 2.06
Vmn1r234Q8R298 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.86■■■□□ 2.05
Vmn1r234Q8R298 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Vmn1r234Q8R298 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.76■■■□□ 2.04
Vmn1r234Q8R298 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Vmn1r234Q8R298 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Vmn1r234Q8R298 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Vmn1r234Q8R298 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.66■■■□□ 2.02
Vmn1r234Q8R298 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
Vmn1r234Q8R298 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Vmn1r234Q8R298 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.27■■□□□ 1.96
Vmn1r234Q8R298 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Vmn1r234Q8R298 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Vmn1r234Q8R298 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Vmn1r234Q8R298 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.1■■□□□ 1.93
Vmn1r234Q8R298 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Vmn1r234Q8R298 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Vmn1r234Q8R298 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Vmn1r234Q8R298 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.98■■□□□ 1.91
Vmn1r234Q8R298 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Vmn1r234Q8R298 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Vmn1r234Q8R298 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Vmn1r234Q8R298 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Vmn1r234Q8R298 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Vmn1r234Q8R298 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Vmn1r234Q8R298 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.84■■□□□ 1.89
Vmn1r234Q8R298 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Vmn1r234Q8R298 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Vmn1r234Q8R298 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Vmn1r234Q8R298 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Vmn1r234Q8R298 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.71■■□□□ 1.87
Vmn1r234Q8R298 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Vmn1r234Q8R298 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Vmn1r234Q8R298 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Vmn1r234Q8R298 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.62■■□□□ 1.85
Vmn1r234Q8R298 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Vmn1r234Q8R298 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Vmn1r234Q8R298 Gm27325-201ENSMUST00000175467 74 ntBASIC26.54■■□□□ 1.84
Vmn1r234Q8R298 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Vmn1r234Q8R298 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Vmn1r234Q8R298 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Vmn1r234Q8R298 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Vmn1r234Q8R298 Gm25238-201ENSMUST00000174914 89 ntBASIC26.4■■□□□ 1.82
Vmn1r234Q8R298 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Vmn1r234Q8R298 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Vmn1r234Q8R298 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Vmn1r234Q8R298 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Vmn1r234Q8R298 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Vmn1r234Q8R298 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Vmn1r234Q8R298 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.28■■□□□ 1.8
Vmn1r234Q8R298 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Vmn1r234Q8R298 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.26■■□□□ 1.79
Vmn1r234Q8R298 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Vmn1r234Q8R298 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Vmn1r234Q8R298 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Vmn1r234Q8R298 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.21■■□□□ 1.79
Vmn1r234Q8R298 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Vmn1r234Q8R298 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Vmn1r234Q8R298 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.12■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms