Protein–RNA interactions for Protein: Q91YH6

Atp6v1b1, ATPase, H+ transporting, lysosomal V1 subunit B1, isoform CRA_a, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1b1Q91YH6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Atp6v1b1Q91YH6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Atp6v1b1Q91YH6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
Atp6v1b1Q91YH6 Gm25239-201ENSMUST00000174915 86 ntBASIC31.07■■■□□ 2.56
Atp6v1b1Q91YH6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Atp6v1b1Q91YH6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Atp6v1b1Q91YH6 Psd-208ENSMUST00000224556 2034 ntBASIC30.71■■■□□ 2.51
Atp6v1b1Q91YH6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Atp6v1b1Q91YH6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Atp6v1b1Q91YH6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Atp6v1b1Q91YH6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Atp6v1b1Q91YH6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Atp6v1b1Q91YH6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Atp6v1b1Q91YH6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Atp6v1b1Q91YH6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.95■■■□□ 2.22
Atp6v1b1Q91YH6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Atp6v1b1Q91YH6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Atp6v1b1Q91YH6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Atp6v1b1Q91YH6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Atp6v1b1Q91YH6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Atp6v1b1Q91YH6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Atp6v1b1Q91YH6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Atp6v1b1Q91YH6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Atp6v1b1Q91YH6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Atp6v1b1Q91YH6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Atp6v1b1Q91YH6 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.96■■■□□ 2.07
Atp6v1b1Q91YH6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.94■■■□□ 2.06
Atp6v1b1Q91YH6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Atp6v1b1Q91YH6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Atp6v1b1Q91YH6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Atp6v1b1Q91YH6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.8■■■□□ 2.04
Atp6v1b1Q91YH6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Atp6v1b1Q91YH6 Gm15042-201ENSMUST00000120212 883 ntBASIC27.75■■■□□ 2.03
Atp6v1b1Q91YH6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Atp6v1b1Q91YH6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.7■■■□□ 2.02
Atp6v1b1Q91YH6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Atp6v1b1Q91YH6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.4■■□□□ 1.98
Atp6v1b1Q91YH6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Atp6v1b1Q91YH6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Atp6v1b1Q91YH6 Gm15045-201ENSMUST00000117359 883 ntBASIC27.2■■□□□ 1.94
Atp6v1b1Q91YH6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Atp6v1b1Q91YH6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
Atp6v1b1Q91YH6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Atp6v1b1Q91YH6 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.13■■□□□ 1.93
Atp6v1b1Q91YH6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Atp6v1b1Q91YH6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.02■■□□□ 1.92
Atp6v1b1Q91YH6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Atp6v1b1Q91YH6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.85■■□□□ 1.89
Atp6v1b1Q91YH6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Atp6v1b1Q91YH6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Atp6v1b1Q91YH6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Atp6v1b1Q91YH6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Atp6v1b1Q91YH6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Atp6v1b1Q91YH6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Atp6v1b1Q91YH6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Atp6v1b1Q91YH6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.7■■□□□ 1.87
Atp6v1b1Q91YH6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Atp6v1b1Q91YH6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
Atp6v1b1Q91YH6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
Atp6v1b1Q91YH6 Gm24109-201ENSMUST00000175489 103 ntBASIC26.63■■□□□ 1.85
Atp6v1b1Q91YH6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Atp6v1b1Q91YH6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.57■■□□□ 1.84
Atp6v1b1Q91YH6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Atp6v1b1Q91YH6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
Atp6v1b1Q91YH6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Atp6v1b1Q91YH6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Atp6v1b1Q91YH6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.46■■□□□ 1.83
Atp6v1b1Q91YH6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Atp6v1b1Q91YH6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Atp6v1b1Q91YH6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Atp6v1b1Q91YH6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.36■■□□□ 1.81
Atp6v1b1Q91YH6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.36■■□□□ 1.81
Atp6v1b1Q91YH6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Atp6v1b1Q91YH6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Atp6v1b1Q91YH6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Atp6v1b1Q91YH6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Atp6v1b1Q91YH6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Atp6v1b1Q91YH6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Atp6v1b1Q91YH6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Atp6v1b1Q91YH6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Atp6v1b1Q91YH6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Atp6v1b1Q91YH6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Atp6v1b1Q91YH6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Atp6v1b1Q91YH6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Atp6v1b1Q91YH6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Atp6v1b1Q91YH6 Gm23366-201ENSMUST00000175022 89 ntBASIC26.09■■□□□ 1.77
Atp6v1b1Q91YH6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.04■■□□□ 1.76
Atp6v1b1Q91YH6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Atp6v1b1Q91YH6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Atp6v1b1Q91YH6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Atp6v1b1Q91YH6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Atp6v1b1Q91YH6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Atp6v1b1Q91YH6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Atp6v1b1Q91YH6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Atp6v1b1Q91YH6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Atp6v1b1Q91YH6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Atp6v1b1Q91YH6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
Atp6v1b1Q91YH6 Zxda-201ENSMUST00000117281 2621 ntBASIC25.85■■□□□ 1.73
Atp6v1b1Q91YH6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Atp6v1b1Q91YH6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms