RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 LYSMD2Q8IV50 215 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 TIGD4Q8IY51 512 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 BEND7Q8N7W2 519 aaPredicted RBP10.16□□□□□ -0.78
USB1-212ENST00000566082 SLC37A3Q8NCC5 494 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 RAB8BQ92930 207 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 MBOAT4Q96T53 435 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 TMED9Q9BVK6 235 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 ACPTQ9BZG2 426 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 SEC14L4Q9UDX3 406 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 SCN9AQ15858 1988 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 DLGAP1O14490 977 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 RPS3P23396 243 aaKnown RBP eCLIP10.16□□□□□ -0.78
USB1-212ENST00000566082 GABRR2P28476 465 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 CNR2P34972 360 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 LIPAP38571 399 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 HNMTP50135 292 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 HK3P52790 923 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 DSTNP60981 165 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 SLBPQ14493 270 aaKnown RBP eCLIP10.16□□□□□ -0.78
USB1-212ENST00000566082 TCEA2Q15560 299 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 RAET1GQ6H3X3 334 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 CEACAM20Q6UY09 585 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 IZUMO1Q8IYV9 350 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 CDK20Q8IZL9 346 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 DNASE1L2Q92874 299 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 NARS2Q96I59 477 aaKnown RBP10.16□□□□□ -0.78
USB1-212ENST00000566082 IKZF5Q9H5V7 419 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 NTN4Q9HB63 628 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 OSER1Q9NX31 292 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 TAS2R16Q9NYV7 291 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 KIAA1522Q9P206 1035 aaPredicted RBP10.16□□□□□ -0.78
USB1-212ENST00000566082 GJD2Q9UKL4 321 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 ENTPD4Q9Y227 616 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 UGT2A1Q9Y4X1 527 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 PCDHB11Q9Y5F2 797 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 MTMR11A4FU01 709 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 PCP4L1A6NKN8 68 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 ITGAMP11215 1152 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 IL7P13232 177 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 ATF4P18848 351 aaPredicted RBP10.16□□□□□ -0.78
USB1-212ENST00000566082 NTSP30990 170 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 SSTR4P31391 388 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 HMGCLP35914 325 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 SOX3P41225 446 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 RGS6P49758 472 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 CLK3P49761 638 aaKnown RBP10.16□□□□□ -0.78
USB1-212ENST00000566082 DCDC1P59894 354 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 CXCR4P61073 352 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 SUZ12Q15022 739 aaKnown RBP10.16□□□□□ -0.78
USB1-212ENST00000566082 IRAK1BP1Q5VVH5 260 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 PPP2R2DQ66LE6 453 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 LRRC66Q68CR7 880 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 FAM180BQ6P0A1 224 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 AGTRAPQ6RW13 159 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 FAM92BQ6ZTR7 304 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 AMIGO1Q86WK6 493 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 MARCH9Q86YJ5 346 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 FBXO22Q8NEZ5 403 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 LILRB4Q8NHJ6 448 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 RHBDF1Q96CC6 855 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 TMEM80Q96HE8 168 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 TBX5Q99593 518 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 SPATA5L1Q9BVQ7 753 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 MND1Q9BWT6 205 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 ZNF717Q9BY31 904 aaPredicted RBP10.16□□□□□ -0.78
USB1-212ENST00000566082 KRCC1Q9NPI7 259 aaPredicted RBP10.16□□□□□ -0.78
USB1-212ENST00000566082 MCUBQ9NWR8 336 aa10.16□□□□□ -0.78
USB1-212ENST00000566082 MBLAC1A4D2B0 266 aaPredicted RBP10.15□□□□□ -0.78
USB1-212ENST00000566082 SOBPA7XYQ1 873 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 ISM1B1AKI9 464 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 HHLA1C9JL84 531 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 AP3D1O14617 1153 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 ATG13O75143 517 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 H1F0P07305 194 aaKnown RBP10.15□□□□□ -0.78
USB1-212ENST00000566082 CDKN2CP42773 168 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 ATP12AP54707 1039 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 AP1S2P56377 157 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 TAS2R50P59544 299 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 GRB14Q14449 540 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 CTSL3PQ5NE16 218 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 CATSPEREQ5SY80 951 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 NAGSQ8N159 534 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 OXR1Q8N573 874 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 QRFPRQ96P65 431 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 CSF3RQ99062 836 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 MGME1Q9BQP7 344 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 YIPF4Q9BSR8 244 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 CENPOQ9BU64 300 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 MRPL17Q9NRX2 175 aaKnown RBP10.15□□□□□ -0.78
USB1-212ENST00000566082 OR7A17O14581 309 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 OR2B3O76000 313 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 CAPNS1P04632 268 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 ELFN1P0C7U0 828 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 HNF1BP35680 557 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 SSR2P43308 183 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 GPR1P46091 355 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 PREPP48147 710 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 CTBSQ01459 385 aa10.15□□□□□ -0.78
USB1-212ENST00000566082 MEF2AQ02078 507 aaPredicted RBP10.15□□□□□ -0.78
USB1-212ENST00000566082 MAB21L1Q13394 359 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms