RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 DCST1Q5T197 706 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 SEL1L2Q5TEA6 688 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 ATF7IP2Q5U623 682 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 GPR107Q5VW38 600 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 PAPD7Q5XG87 772 aaKnown RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 RGS7BPQ6MZT1 257 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 ANKRD26P1Q6NSI1 321 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 ZSCAN25Q6NSZ9 544 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 HMBOX1Q6NT76 420 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 MRNIPQ6NTE8 343 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 FBXO46Q6PJ61 603 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 CCDC137Q6PK04 289 aaKnown RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 CLEC9AQ6UXN8 241 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 WASH2PQ6VEQ5 465 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 PGAP1Q75T13 922 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 H1FNTQ75WM6 255 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 SSX9Q7RTT3 188 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 CYP4Z1Q86W10 505 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 ZNF573Q86YE8 665 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 TMPRSS6Q8IU80 811 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLC35F3Q8IY50 421 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 PRSS58Q8IYP2 241 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 UNC5BQ8IZJ1 945 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 SELENOHQ8IZQ5 122 aaKnown RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 KIF2BQ8N4N8 673 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 NHLRC2Q8NBF2 726 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 TMEM35BQ8NCS4 154 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 PAPD5Q8NDF8 572 aaKnown RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLC17A8Q8NDX2 589 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 CATSPER1Q8NEC5 780 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR2L5Q8NG80 312 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR2D3Q8NGH3 330 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR52E1Q8NGJ3 308 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR5D18Q8NGL1 313 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 DTX3LQ8TDB6 740 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 CKAP2Q8WWK9 683 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 PRPF31Q8WWY3 499 aaKnown RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 TRIB2Q92519 343 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 ELMO1Q92556 727 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 UFD1Q92890 307 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 TMBIM1Q969X1 311 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 TCEAL4Q96EI5 215 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 LRIG1Q96JA1 1093 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 ZNF597Q96LX8 424 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 ZNF641Q96N77 438 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 TGS1Q96RS0 853 aaKnown RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 PLEKHF1Q96S99 279 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 SMOQ99835 787 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 SSX3Q99909 188 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 PKP2Q99959 881 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 C2orf88Q9BSF0 95 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 NAA11Q9BSU3 229 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 TUBB6Q9BUF5 446 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 KIFC1Q9BW19 673 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 AMNQ9BXJ7 453 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 TLR10Q9BXR5 811 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 DGCR6LQ9BY27 220 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 TRIM31Q9BZY9 425 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 DNTTIP1Q9H147 329 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 CDT1Q9H211 546 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 NELFAQ9H3P2 528 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 FBXO44Q9H4M3 255 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 ECT2Q9H8V3 914 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 MSL2Q9HCI7 577 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 EMC7Q9NPA0 242 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 MMP25Q9NPA2 562 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 CHST11Q9NPF2 352 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 PRDM8Q9NQV8 689 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 PRMT8Q9NR22 394 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 CTPS2Q9NRF8 586 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 RNF146Q9NTX7 359 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 POT1Q9NUX5 634 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 AURKAIP1Q9NWT8 199 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 HCFC1R1Q9NWW0 138 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 NDUFAF4Q9P032 175 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 DBNLQ9UJU6 430 aaKnown RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 RPL26L1Q9UNX3 145 aaKnown RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 B3GNT3Q9Y2A9 372 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 MAN2B2Q9Y2E5 1009 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 STARD10Q9Y365 291 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 NDUFAF1Q9Y375 327 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 REXO2Q9Y3B8 237 aaKnown RBP4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 PCDHGB1Q9Y5G3 927 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 PIK3C2BO00750 1634 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLIT2O94813 1529 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 KIF20BQ96Q89 1820 aa4.56□□□□□ -1.68
HMGB3P9-201ENST00000441799 ADAMTS13Q76LX8 1427 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 YTHDC2Q9H6S0 1430 aaKnown RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 ANKRD26Q9UPS8 1709 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 CAMTA1Q9Y6Y1 1673 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 ASTN2O75129 1339 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 A0A1W2PPQ1 181 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 SMIM30A4D0T7 59 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 CBY3A6NI87 242 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 METTL15A6NJ78 407 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR2AT4A6NND4 320 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 EFCAB7A8K855 629 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 PDZK1P1A8MUH7 402 aa4.55□□□□□ -1.68
HMGB3P9-201ENST00000441799 KCNU1A8MYU2 1149 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms