RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W YPL066WQ12194 479 aa4.48□□□□□ -1.69
UBP16YPL072W BI4P03879 638 aa4.47□□□□□ -1.69
UBP16YPL072W DOM34P33309 386 aa4.47□□□□□ -1.69
UBP16YPL072W MOT2P34909 587 aaKnown RBP4.47□□□□□ -1.69
UBP16YPL072W SPO20Q04359 397 aa4.47□□□□□ -1.69
UBP16YPL072W NAP1P25293 417 aaKnown RBP4.46□□□□□ -1.69
UBP16YPL072W YGL176CP46945 554 aa4.46□□□□□ -1.69
UBP16YPL072W PBP1P53297 722 aaKnown RBP4.46□□□□□ -1.69
UBP16YPL072W MSC2Q03455 724 aa4.46□□□□□ -1.69
UBP16YPL072W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.46□□□□□ -1.69not detected
UBP16YPL072W YKL107WP34251 309 aa4.46□□□□□ -1.7
UBP16YPL072W SVF1Q05515 481 aa4.46□□□□□ -1.7
UBP16YPL072W CLN2P20438 545 aa4.45□□□□□ -1.7
UBP16YPL072W TAT2P38967 592 aa4.45□□□□□ -1.7
UBP16YPL072W SNF7P39929 240 aaKnown RBP4.45□□□□□ -1.7
UBP16YPL072W SIP5P40210 489 aaKnown RBP4.45□□□□□ -1.7
UBP16YPL072W FAA4P47912 694 aaKnown RBP4.45□□□□□ -1.7
UBP16YPL072W YLR225CQ05948 407 aaKnown RBP4.45□□□□□ -1.7
UBP16YPL072W RXT3Q07458 294 aa4.45□□□□□ -1.7
UBP16YPL072W GPB1Q08886 897 aa4.45□□□□□ -1.7
UBP16YPL072W CDC6P09119 513 aa4.44□□□□□ -1.7
UBP16YPL072W CDC20P26309 610 aa4.44□□□□□ -1.7
UBP16YPL072W PIN4P34217 668 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
UBP16YPL072W HFM1P51979 1187 aa4.44□□□□□ -1.7
UBP16YPL072W MTC3P53077 123 aa4.44□□□□□ -1.7
UBP16YPL072W GDE1Q02979 1223 aa4.44□□□□□ -1.7
UBP16YPL072W ACK1Q07622 623 aaPredicted RBP4.44□□□□□ -1.7
UBP16YPL072W PIN2Q12057 282 aa4.44□□□□□ -1.7
UBP16YPL072W CTS1P29029 562 aa4.43□□□□□ -1.7
UBP16YPL072W KRI1P42846 591 aaKnown RBP4.43□□□□□ -1.7
UBP16YPL072W YLL058WQ12198 575 aa4.43□□□□□ -1.7
UBP16YPL072W SHM2P37291 469 aaKnown RBP4.42□□□□□ -1.7
UBP16YPL072W MPT5P39016 859 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
UBP16YPL072W MAD1P40957 749 aa4.42□□□□□ -1.7
UBP16YPL072W VPS62P53285 467 aa4.42□□□□□ -1.7
UBP16YPL072W VPS16Q03308 798 aa4.42□□□□□ -1.7
UBP16YPL072W YKL151CP36059 337 aa4.41□□□□□ -1.7
UBP16YPL072W ESC2Q06340 456 aa4.41□□□□□ -1.7
UBP16YPL072W HMI1Q12039 706 aa4.41□□□□□ -1.7
UBP16YPL072W AGP1P25376 633 aa4.41□□□□□ -1.7
UBP16YPL072W SBA1P28707 216 aaKnown RBP4.41□□□□□ -1.7
UBP16YPL072W ABD1P32783 436 aaPredicted RBP4.41□□□□□ -1.7
UBP16YPL072W GTF1P53260 183 aaPredicted RBP4.41□□□□□ -1.7
UBP16YPL072W HRQ1Q05549 1077 aa4.41□□□□□ -1.7
UBP16YPL072W STE11P23561 717 aa4.4□□□□□ -1.71
UBP16YPL072W LST4P34239 828 aa4.4□□□□□ -1.71
UBP16YPL072W YAP1801P38856 637 aa4.4□□□□□ -1.71
UBP16YPL072W MND2P40577 368 aa4.4□□□□□ -1.71
UBP16YPL072W CWC24P53769 259 aa4.4□□□□□ -1.71
UBP16YPL072W GSF2Q04697 403 aaKnown RBP4.4□□□□□ -1.71
UBP16YPL072W JIP5Q06214 492 aaPredicted RBP4.4□□□□□ -1.71
UBP16YPL072W XYL2Q07993 356 aa4.4□□□□□ -1.71
UBP16YPL072W MDM38Q08179 573 aa4.4□□□□□ -1.71
UBP16YPL072W FAL1Q12099 399 aaKnown RBP4.4□□□□□ -1.71
UBP16YPL072W OSW2Q12202 724 aa4.4□□□□□ -1.71
UBP16YPL072W EMC1P25574 760 aa4.39□□□□□ -1.71
UBP16YPL072W ZRG8P40021 1076 aa4.39□□□□□ -1.71
UBP16YPL072W GCV2P49095 1034 aa4.39□□□□□ -1.71
UBP16YPL072W YAP6Q03935 383 aa4.39□□□□□ -1.71
UBP16YPL072W NOP12Q08208 459 aaKnown RBP4.39□□□□□ -1.71
UBP16YPL072W FUN30P31380 1131 aa4.38□□□□□ -1.71
UBP16YPL072W MET12P46151 657 aa4.38□□□□□ -1.71
UBP16YPL072W MNN10P50108 393 aaKnown RBP4.38□□□□□ -1.71
UBP16YPL072W SNU71P53207 620 aaKnown RBP4.38□□□□□ -1.71
UBP16YPL072W SRT1Q03175 343 aa4.38□□□□□ -1.71
UBP16YPL072W YLR224WQ05947 369 aa4.38□□□□□ -1.71
UBP16YPL072W TMA10Q06177 86 aa4.38□□□□□ -1.71
UBP16YPL072W ADY3Q07732 790 aa4.38□□□□□ -1.71
UBP16YPL072W TPO1Q07824 586 aa4.38□□□□□ -1.71
UBP16YPL072W POA1P38218 177 aa4.37□□□□□ -1.71
UBP16YPL072W MBP1P39678 833 aa4.37□□□□□ -1.71
UBP16YPL072W SHE9Q04172 456 aa4.37□□□□□ -1.71
UBP16YPL072W OPI10Q08202 246 aa4.37□□□□□ -1.71
UBP16YPL072W RPP2AP05319 106 aaKnown RBP4.36□□□□□ -1.71
UBP16YPL072W GIC1P38785 314 aa4.36□□□□□ -1.71
UBP16YPL072W SAH1P39954 449 aaKnown RBP4.36□□□□□ -1.71
UBP16YPL072W MCM6P53091 1017 aaKnown RBP4.36□□□□□ -1.71
UBP16YPL072W SRP1Q02821 542 aaKnown RBP4.36□□□□□ -1.71
UBP16YPL072W TUB2P02557 457 aaKnown RBP4.36□□□□□ -1.71
UBP16YPL072W HIS5P07172 385 aa4.36□□□□□ -1.71
UBP16YPL072W ENA1P13587 1091 aa4.36□□□□□ -1.71
UBP16YPL072W CDC12P32468 407 aaKnown RBP4.36□□□□□ -1.71
UBP16YPL072W VBA5P36172 582 aa4.36□□□□□ -1.71
UBP16YPL072W ECM21P38167 1117 aaKnown RBP4.36□□□□□ -1.71
UBP16YPL072W YGR012WP53206 393 aa4.36□□□□□ -1.71
UBP16YPL072W ENA2Q01896 1091 aa4.36□□□□□ -1.71
UBP16YPL072W CDA1Q06702 301 aa4.36□□□□□ -1.71
UBP16YPL072W ENA5Q12691 1091 aa4.36□□□□□ -1.71
UBP16YPL072W HCM1P25364 564 aa4.35□□□□□ -1.71
UBP16YPL072W TRM2P33753 639 aa4.35□□□□□ -1.71
UBP16YPL072W YKL069WP36088 180 aa4.35□□□□□ -1.71
UBP16YPL072W CHA4P43634 648 aa4.35□□□□□ -1.71
UBP16YPL072W PRI2P20457 528 aa4.34□□□□□ -1.71
UBP16YPL072W PLB1P39105 664 aa4.34□□□□□ -1.71
UBP16YPL072W NPP2P39997 493 aa4.34□□□□□ -1.71
UBP16YPL072W GUS1P46655 708 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
UBP16YPL072W HSF1P10961 833 aa4.33□□□□□ -1.72
UBP16YPL072W RPC82P32349 654 aa4.33□□□□□ -1.72
UBP16YPL072W DCG1P32460 244 aa4.33□□□□□ -1.72
UBP16YPL072W SRP101P32916 621 aa4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms