RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C YAR028WP39548 234 aa5.5□□□□□ -1.53
VPS21YOR089C YJR008WP47085 338 aa5.5□□□□□ -1.53
VPS21YOR089C SDH1Q00711 640 aa5.5□□□□□ -1.53
VPS21YOR089C RAT1Q02792 1006 aaKnown RBP5.5□□□□□ -1.53
VPS21YOR089C YMR074CQ04773 145 aa5.5□□□□□ -1.53
VPS21YOR089C GIC2Q06648 383 aa5.5□□□□□ -1.53
VPS21YOR089C GCD1P09032 578 aaPredicted RBP5.49□□□□□ -1.53
VPS21YOR089C ELM1P32801 640 aa5.49□□□□□ -1.53
VPS21YOR089C ALG3P38179 458 aa5.49□□□□□ -1.53
VPS21YOR089C MBP1P39678 833 aa5.49□□□□□ -1.53
VPS21YOR089C MPH1P40562 993 aa5.49□□□□□ -1.53
VPS21YOR089C YNR063WP53749 607 aa5.49□□□□□ -1.53
VPS21YOR089C DNM1P54861 757 aa5.49□□□□□ -1.53
VPS21YOR089C SPP382Q06411 708 aaPredicted RBP5.49□□□□□ -1.53
VPS21YOR089C NTG2Q08214 380 aa5.49□□□□□ -1.53
VPS21YOR089C YPL260WQ08977 551 aa5.49□□□□□ -1.53
VPS21YOR089C ADR1P07248 1323 aa5.48□□□□□ -1.53
VPS21YOR089C GSY1P23337 708 aa5.48□□□□□ -1.53
VPS21YOR089C MLS1P30952 554 aa5.48□□□□□ -1.53
VPS21YOR089C AAR2P32357 355 aaPredicted RBP5.48□□□□□ -1.53
VPS21YOR089C DOM34P33309 386 aa5.48□□□□□ -1.53
VPS21YOR089C PEX6P33760 1030 aa5.48□□□□□ -1.53
VPS21YOR089C YEN1P40028 759 aa5.48□□□□□ -1.53
VPS21YOR089C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
VPS21YOR089C TOM70P07213 617 aaKnown RBP5.47□□□□□ -1.53
VPS21YOR089C NFS1P25374 497 aa5.47□□□□□ -1.53
VPS21YOR089C MRC1P25588 1096 aa5.47□□□□□ -1.53
VPS21YOR089C PMT3P47190 753 aa5.47□□□□□ -1.53
VPS21YOR089C HLJ1P48353 224 aa5.47□□□□□ -1.53
VPS21YOR089C RTA1P53047 317 aa5.47□□□□□ -1.53
VPS21YOR089C SRP1Q02821 542 aaKnown RBP5.47□□□□□ -1.53
VPS21YOR089C YDR306CQ06640 478 aa5.47□□□□□ -1.53
VPS21YOR089C RPL8AP17076 256 aaKnown RBP5.46□□□□□ -1.54
VPS21YOR089C AFG2P32794 780 aa5.46□□□□□ -1.54
VPS21YOR089C LRG1P35688 1017 aa5.46□□□□□ -1.54
VPS21YOR089C GDH3P39708 457 aa5.46□□□□□ -1.54
VPS21YOR089C YNR029CP53729 429 aaKnown RBP5.46□□□□□ -1.54
VPS21YOR089C YPL066WQ12194 479 aa5.46□□□□□ -1.54
VPS21YOR089C HBN1Q96VH4 193 aa5.46□□□□□ -1.54
VPS21YOR089C ADE8P04161 214 aa5.45□□□□□ -1.54
VPS21YOR089C PPH3P32345 308 aa5.45□□□□□ -1.54
VPS21YOR089C BET3P36149 193 aa5.45□□□□□ -1.54
VPS21YOR089C NUG1P40010 520 aaKnown RBP5.45□□□□□ -1.54
VPS21YOR089C TFB2Q02939 513 aa5.45□□□□□ -1.54
VPS21YOR089C HBS1P32769 611 aaKnown RBP5.44□□□□□ -1.54
VPS21YOR089C NNK1P36003 928 aa5.44□□□□□ -1.54
VPS21YOR089C GPT2P36148 743 aa5.44□□□□□ -1.54
VPS21YOR089C GRX7P38068 203 aa5.44□□□□□ -1.54
VPS21YOR089C QNS1P38795 714 aaKnown RBP5.44□□□□□ -1.54
VPS21YOR089C SIT1P39980 628 aa5.44□□□□□ -1.54
VPS21YOR089C UBP6P43593 499 aaKnown RBP5.44□□□□□ -1.54
VPS21YOR089C GUS1P46655 708 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
VPS21YOR089C DUS3Q06053 668 aaKnown RBP5.44□□□□□ -1.54
VPS21YOR089C YOR223WQ12015 292 aa5.44□□□□□ -1.54
VPS21YOR089C HIR3P47171 1648 aa5.44□□□□□ -1.54
VPS21YOR089C THS1P04801 734 aaKnown RBP5.43□□□□□ -1.54
VPS21YOR089C RNQ1P25367 405 aa5.43□□□□□ -1.54
VPS21YOR089C WHI3P34761 661 aaKnown RBP5.43□□□□□ -1.54
VPS21YOR089C PAF1P38351 445 aa5.43□□□□□ -1.54
VPS21YOR089C ZDS1P50111 915 aaKnown RBP5.43□□□□□ -1.54
VPS21YOR089C YGR045CP53229 120 aa5.43□□□□□ -1.54
VPS21YOR089C HRK1Q08732 759 aaKnown RBP5.43□□□□□ -1.54
VPS21YOR089C MDM12Q92328 271 aa5.43□□□□□ -1.54
VPS21YOR089C SEG2P34250 1132 aa5.42□□□□□ -1.54
VPS21YOR089C PET10P36139 283 aa5.42□□□□□ -1.54
VPS21YOR089C PNT1P38969 423 aa5.42□□□□□ -1.54
VPS21YOR089C DSS1P39112 969 aa5.42□□□□□ -1.54
VPS21YOR089C SIP5P40210 489 aaKnown RBP5.42□□□□□ -1.54
VPS21YOR089C YGR237CP50089 785 aa5.42□□□□□ -1.54
VPS21YOR089C LCD1Q04377 747 aa5.42□□□□□ -1.54
VPS21YOR089C RSA3Q05942 220 aaKnown RBP5.42□□□□□ -1.54
VPS21YOR089C ALG6Q12001 544 aaKnown RBP5.42□□□□□ -1.54
VPS21YOR089C SPO21Q12411 609 aa5.42□□□□□ -1.54
VPS21YOR089C NUP145P49687 1317 aa5.42□□□□□ -1.54
VPS21YOR089C RET1P22276 1149 aaKnown RBP5.41□□□□□ -1.54
VPS21YOR089C YBR284WP38150 797 aa5.41□□□□□ -1.54
VPS21YOR089C RPN3P40016 523 aaKnown RBP5.41□□□□□ -1.54
VPS21YOR089C ATG36P46983 293 aa5.41□□□□□ -1.54
VPS21YOR089C YNL193WP53870 558 aa5.41□□□□□ -1.54
VPS21YOR089C ATG13Q06628 738 aa5.41□□□□□ -1.54
VPS21YOR089C RPL11AP0C0W9 174 aaKnown RBP5.4□□□□□ -1.54
VPS21YOR089C RAD53P22216 821 aa5.4□□□□□ -1.54
VPS21YOR089C KIP1P28742 1111 aa5.4□□□□□ -1.54
VPS21YOR089C POL12P38121 705 aaPredicted RBP5.4□□□□□ -1.54
VPS21YOR089C MMM1P41800 426 aa5.4□□□□□ -1.54
VPS21YOR089C ALG2P43636 503 aa5.4□□□□□ -1.54
VPS21YOR089C CCM1P48237 864 aaPredicted RBP5.4□□□□□ -1.54
VPS21YOR089C SDA1P53313 767 aaKnown RBP5.4□□□□□ -1.54
VPS21YOR089C ELA1P53861 379 aaPredicted RBP5.4□□□□□ -1.54
VPS21YOR089C SUB1P54000 292 aaKnown RBP5.4□□□□□ -1.54
VPS21YOR089C DOT1Q04089 582 aaKnown RBP5.4□□□□□ -1.54
VPS21YOR089C YPR071WQ12346 211 aa5.4□□□□□ -1.54
VPS21YOR089C RPL11BQ3E757 174 aaPredicted RBP5.4□□□□□ -1.54
VPS21YOR089C YER152CP10356 443 aa5.39□□□□□ -1.55
VPS21YOR089C SMY2P32909 740 aaKnown RBP5.39□□□□□ -1.55
VPS21YOR089C YEL1P34225 687 aa5.39□□□□□ -1.55
VPS21YOR089C YRO2P38079 344 aa5.39□□□□□ -1.55
VPS21YOR089C MAL11P53048 616 aa5.39□□□□□ -1.55
VPS21YOR089C YLR257WQ06146 321 aaKnown RBP5.39□□□□□ -1.55
VPS21YOR089C THI73Q07904 523 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 121.1 ms