RNA–Protein interactions for RNA: YOR021C

SFM1, Transcript of SPOUT methyltransferase, yeast

Gene SFM1, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SFM1	YOR021C	GDE1	Q02979	1223 aa		4.31	□□□□□ -1.72
SFM1	YOR021C	CLN2	P20438	545 aa		4.3	□□□□□ -1.72
SFM1	YOR021C	EMC1	P25574	760 aa		4.3	□□□□□ -1.72
SFM1	YOR021C	MLS1	P30952	554 aa		4.3	□□□□□ -1.72
SFM1	YOR021C	HXT13	P39924	564 aa		4.3	□□□□□ -1.72
SFM1	YOR021C	VPS62	P53285	467 aa		4.3	□□□□□ -1.72
SFM1	YOR021C	HXT17	P53631	564 aa		4.3	□□□□□ -1.72
SFM1	YOR021C	ORC1	P54784	914 aa	Predicted RBP	4.3	□□□□□ -1.72
SFM1	YOR021C	HXT15	P54854	567 aa		4.3	□□□□□ -1.72
SFM1	YOR021C	EEB1	Q02891	456 aa		4.3	□□□□□ -1.72
SFM1	YOR021C	YLR224W	Q05947	369 aa		4.3	□□□□□ -1.72
SFM1	YOR021C	STE11	P23561	717 aa		4.29	□□□□□ -1.72
SFM1	YOR021C	AIM21	P40563	679 aa		4.29	□□□□□ -1.72
SFM1	YOR021C	YPT53	P36019	220 aa		4.28	□□□□□ -1.72
SFM1	YOR021C	YKL069W	P36088	180 aa		4.28	□□□□□ -1.72
SFM1	YOR021C	CHS7	P38843	316 aa		4.28	□□□□□ -1.72
SFM1	YOR021C	SIW14	P53965	281 aa		4.28	□□□□□ -1.72
SFM1	YOR021C	KIN4	Q01919	800 aa		4.28	□□□□□ -1.72
SFM1	YOR021C	ESC2	Q06340	456 aa		4.28	□□□□□ -1.72
SFM1	YOR021C	RTT10	Q08924	1013 aa		4.28	□□□□□ -1.72
SFM1	YOR021C	HMI1	Q12039	706 aa		4.28	□□□□□ -1.72
SFM1	YOR021C	PMI40	P29952	429 aa	Known RBP	4.27	□□□□□ -1.73
SFM1	YOR021C	RER2	P35196	286 aa		4.27	□□□□□ -1.73
SFM1	YOR021C	YGR053C	P53234	283 aa		4.27	□□□□□ -1.73
SFM1	YOR021C	SIZ1	Q04195	904 aa		4.27	□□□□□ -1.73
SFM1	YOR021C	SSF2	Q12153	453 aa	Predicted RBP	4.27	□□□□□ -1.73
SFM1	YOR021C	TAF13	P11747	167 aa		4.26	□□□□□ -1.73
SFM1	YOR021C	KIN2	P13186	1147 aa	Known RBP	4.26	□□□□□ -1.73
SFM1	YOR021C	NAP1	P25293	417 aa	Known RBP	4.26	□□□□□ -1.73
SFM1	YOR021C	SYP1	P25623	870 aa	Known RBP	4.26	□□□□□ -1.73
SFM1	YOR021C	RGD1	P38339	666 aa		4.26	□□□□□ -1.73
SFM1	YOR021C	OCA5	P38738	679 aa		4.26	□□□□□ -1.73
SFM1	YOR021C	MXR1	P40029	184 aa		4.26	□□□□□ -1.73
SFM1	YOR021C	SIP5	P40210	489 aa	Known RBP	4.26	□□□□□ -1.73
SFM1	YOR021C	PBP1	P53297	722 aa	Known RBP	4.26	□□□□□ -1.73
SFM1	YOR021C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
SFM1	YOR021C	PMA1	P05030	918 aa	Known RBP	4.25	□□□□□ -1.73
SFM1	YOR021C	BAS1	P22035	811 aa		4.25	□□□□□ -1.73
SFM1	YOR021C	MOT2	P34909	587 aa	Known RBP	4.25	□□□□□ -1.73
SFM1	YOR021C	CNN1	P43618	361 aa		4.25	□□□□□ -1.73
SFM1	YOR021C	CTF4	Q01454	927 aa		4.25	□□□□□ -1.73
SFM1	YOR021C	OPI10	Q08202	246 aa		4.25	□□□□□ -1.73
SFM1	YOR021C	FAL1	Q12099	399 aa	Known RBP	4.25	□□□□□ -1.73
SFM1	YOR021C	TRP2	P00899	507 aa	Known RBP	4.24	□□□□□ -1.73
SFM1	YOR021C	DBP5	P20449	482 aa	Known RBP	4.24	□□□□□ -1.73
SFM1	YOR021C	RAD53	P22216	821 aa		4.24	□□□□□ -1.73
SFM1	YOR021C	RAD27	P26793	382 aa		4.24	□□□□□ -1.73
SFM1	YOR021C	ABD1	P32783	436 aa	Predicted RBP	4.24	□□□□□ -1.73
SFM1	YOR021C	MSS4	P38994	779 aa		4.24	□□□□□ -1.73
SFM1	YOR021C	PLB1	P39105	664 aa		4.24	□□□□□ -1.73
SFM1	YOR021C	MPH1	P40562	993 aa		4.24	□□□□□ -1.73
SFM1	YOR021C	MSC2	Q03455	724 aa		4.24	□□□□□ -1.73
SFM1	YOR021C	YLR225C	Q05948	407 aa	Known RBP	4.24	□□□□□ -1.73
SFM1	YOR021C	WRS1	Q12109	432 aa	Known RBP	4.24	□□□□□ -1.73
SFM1	YOR021C	ACE2	P21192	770 aa		4.23	□□□□□ -1.73
SFM1	YOR021C	DBP2	P24783	546 aa	Known RBP	4.23	□□□□□ -1.73
SFM1	YOR021C	GRX1	P25373	110 aa	Known RBP	4.23	□□□□□ -1.73
SFM1	YOR021C	IOC3	P43596	787 aa		4.23	□□□□□ -1.73
SFM1	YOR021C	NNF1	P47149	201 aa		4.23	□□□□□ -1.73
SFM1	YOR021C	TYW3	P53177	273 aa		4.23	□□□□□ -1.73
SFM1	YOR021C	ATG13	Q06628	738 aa		4.23	□□□□□ -1.73
SFM1	YOR021C	TMA46	Q12000	345 aa	Known RBP	4.23	□□□□□ -1.73
SFM1	YOR021C	BI4	P03879	638 aa		4.22	□□□□□ -1.73
SFM1	YOR021C	DCG1	P32460	244 aa		4.22	□□□□□ -1.73
SFM1	YOR021C	DEF1	P35732	738 aa	Known RBP	4.22	□□□□□ -1.73
SFM1	YOR021C	UGA2	P38067	497 aa		4.22	□□□□□ -1.73
SFM1	YOR021C	HFM1	P51979	1187 aa		4.22	□□□□□ -1.73
SFM1	YOR021C	TDA5	Q06417	326 aa	Known RBP	4.22	□□□□□ -1.73
SFM1	YOR021C	XYL2	Q07993	356 aa		4.22	□□□□□ -1.73
SFM1	YOR021C	LYP1	P32487	611 aa		4.21	□□□□□ -1.74
SFM1	YOR021C	SPF1	P39986	1215 aa	Known RBP	4.21	□□□□□ -1.74
SFM1	YOR021C	ENT3	P47160	408 aa		4.21	□□□□□ -1.74
SFM1	YOR021C	TIF35	Q04067	274 aa	Known RBP	4.21	□□□□□ -1.74
SFM1	YOR021C	TPO1	Q07824	586 aa		4.21	□□□□□ -1.74
SFM1	YOR021C	NOP12	Q08208	459 aa	Known RBP	4.21	□□□□□ -1.74
SFM1	YOR021C	YPL066W	Q12194	479 aa		4.21	□□□□□ -1.74
SFM1	YOR021C	YOL098C	Q12496	1037 aa		4.21	□□□□□ -1.74
SFM1	YOR021C	YTA7	P40340	1379 aa		4.2	□□□□□ -1.74
SFM1	YOR021C	RPL11A	P0C0W9	174 aa	Known RBP	4.2	□□□□□ -1.74
SFM1	YOR021C	INO1	P11986	533 aa		4.2	□□□□□ -1.74
SFM1	YOR021C	STE5	P32917	917 aa		4.2	□□□□□ -1.74
SFM1	YOR021C	MND2	P40577	368 aa		4.2	□□□□□ -1.74
SFM1	YOR021C	YML122C	Q03207	126 aa		4.2	□□□□□ -1.74
SFM1	YOR021C	RPL11B	Q3E757	174 aa	Predicted RBP	4.2	□□□□□ -1.74
SFM1	YOR021C	RAD4	P14736	754 aa		4.19	□□□□□ -1.74
SFM1	YOR021C	MCM7	P38132	845 aa		4.19	□□□□□ -1.74
SFM1	YOR021C	SLA2	P33338	968 aa		4.18	□□□□□ -1.74
SFM1	YOR021C	VBA5	P36172	582 aa		4.18	□□□□□ -1.74
SFM1	YOR021C	YBR184W	P38299	523 aa		4.18	□□□□□ -1.74
SFM1	YOR021C	YGL176C	P46945	554 aa		4.18	□□□□□ -1.74
SFM1	YOR021C	HUL5	P53119	910 aa		4.18	□□□□□ -1.74
SFM1	YOR021C	SPO20	Q04359	397 aa		4.18	□□□□□ -1.74
SFM1	YOR021C	NSE3	Q05541	303 aa		4.18	□□□□□ -1.74
SFM1	YOR021C	ADY3	Q07732	790 aa		4.18	□□□□□ -1.74
SFM1	YOR021C	SRP40	P32583	406 aa	Predicted RBP	4.17	□□□□□ -1.74
SFM1	YOR021C	MBP1	P39678	833 aa		4.17	□□□□□ -1.74
SFM1	YOR021C	ZRG8	P40021	1076 aa		4.17	□□□□□ -1.74
SFM1	YOR021C	BDF2	Q07442	638 aa		4.17	□□□□□ -1.74
SFM1	YOR021C	ACM1	Q08981	209 aa		4.17	□□□□□ -1.74
SFM1	YOR021C	CDC53	Q12018	815 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms