RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W FLC1Q08967 793 aa6.36□□□□□ -1.39
SPO20YMR017W BI4P03879 638 aa6.35□□□□□ -1.39
SPO20YMR017W UTP8P53276 713 aaKnown RBP6.35□□□□□ -1.39
SPO20YMR017W RPN4Q03465 531 aa6.35□□□□□ -1.39
SPO20YMR017W DUS3Q06053 668 aaKnown RBP6.35□□□□□ -1.39
SPO20YMR017W UBX5Q06682 500 aa6.35□□□□□ -1.39
SPO20YMR017W THS1P04801 734 aaKnown RBP6.34□□□□□ -1.39
SPO20YMR017W ARE1P25628 610 aa6.34□□□□□ -1.39
SPO20YMR017W TPO2P53283 614 aa6.34□□□□□ -1.39
SPO20YMR017W HRQ1Q05549 1077 aa6.34□□□□□ -1.39
SPO20YMR017W CIT1P00890 479 aa6.33□□□□□ -1.4
SPO20YMR017W SPS1P08458 490 aa6.33□□□□□ -1.4
SPO20YMR017W PUB1P32588 453 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
SPO20YMR017W LIP5P32875 414 aa6.33□□□□□ -1.4
SPO20YMR017W OMA1P36163 345 aa6.33□□□□□ -1.4
SPO20YMR017W PBP2P38151 413 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
SPO20YMR017W BRE4Q07660 1125 aa6.33□□□□□ -1.4
SPO20YMR017W LPX1Q12405 387 aaKnown RBP6.33□□□□□ -1.4
SPO20YMR017W PPH3P32345 308 aa6.32□□□□□ -1.4
SPO20YMR017W AAR2P32357 355 aaPredicted RBP6.32□□□□□ -1.4
SPO20YMR017W CDC12P32468 407 aaKnown RBP6.32□□□□□ -1.4
SPO20YMR017W HBS1P32769 611 aaKnown RBP6.32□□□□□ -1.4
SPO20YMR017W YKL151CP36059 337 aa6.32□□□□□ -1.4
SPO20YMR017W CCC2P38995 1004 aa6.32□□□□□ -1.4
SPO20YMR017W RSP5P39940 809 aaKnown RBP6.32□□□□□ -1.4
SPO20YMR017W SAH1P39954 449 aaKnown RBP6.32□□□□□ -1.4
SPO20YMR017W SRP1Q02821 542 aaKnown RBP6.32□□□□□ -1.4
SPO20YMR017W GAL11P19659 1081 aa6.31□□□□□ -1.4
SPO20YMR017W HSP78P33416 811 aa6.31□□□□□ -1.4
SPO20YMR017W CTH1P47976 325 aa6.31□□□□□ -1.4
SPO20YMR017W RGA2Q06407 1009 aa6.31□□□□□ -1.4
SPO20YMR017W ATG13Q06628 738 aa6.31□□□□□ -1.4
SPO20YMR017W PPM2Q08282 695 aa6.31□□□□□ -1.4
SPO20YMR017W SVS1Q12254 260 aa6.31□□□□□ -1.4
SPO20YMR017W ACE2P21192 770 aa6.3□□□□□ -1.4
SPO20YMR017W RRT14P40470 206 aa6.3□□□□□ -1.4
SPO20YMR017W HUL4P40985 892 aa6.3□□□□□ -1.4
SPO20YMR017W BUD6P41697 788 aa6.3□□□□□ -1.4
SPO20YMR017W SEC26P41810 973 aaKnown RBP6.3□□□□□ -1.4
SPO20YMR017W INP52P50942 1183 aa6.3□□□□□ -1.4
SPO20YMR017W FOL2P51601 243 aaKnown RBP6.3□□□□□ -1.4
SPO20YMR017W YLL058WQ12198 575 aa6.3□□□□□ -1.4
SPO20YMR017W GGA2P38817 585 aaKnown RBP6.29□□□□□ -1.4
SPO20YMR017W ORC3P54790 616 aa6.29□□□□□ -1.4
SPO20YMR017W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
SPO20YMR017W TAF8Q03750 510 aa6.29□□□□□ -1.4
SPO20YMR017W MDM38Q08179 573 aa6.29□□□□□ -1.4
SPO20YMR017W CAN1P04817 590 aa6.28□□□□□ -1.4
SPO20YMR017W CIT2P08679 460 aa6.28□□□□□ -1.4
SPO20YMR017W CDC11P32458 415 aa6.28□□□□□ -1.4
SPO20YMR017W MAC1P35192 417 aa6.28□□□□□ -1.4
SPO20YMR017W YBR284WP38150 797 aa6.28□□□□□ -1.4
SPO20YMR017W RFC5P38251 354 aa6.28□□□□□ -1.4
SPO20YMR017W SIT1P39980 628 aa6.28□□□□□ -1.4
SPO20YMR017W MTC3P53077 123 aa6.28□□□□□ -1.4
SPO20YMR017W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
SPO20YMR017W YDL124WQ07551 312 aaKnown RBP6.28□□□□□ -1.4
SPO20YMR017W HBN1Q96VH4 193 aa6.28□□□□□ -1.4
SPO20YMR017W TIM23P32897 222 aa6.27□□□□□ -1.41
SPO20YMR017W ABZ1P37254 787 aaPredicted RBP6.27□□□□□ -1.41
SPO20YMR017W YRO2P38079 344 aa6.27□□□□□ -1.41
SPO20YMR017W CHZ1P40019 153 aaPredicted RBP6.27□□□□□ -1.41
SPO20YMR017W OSW7P43611 510 aa6.27□□□□□ -1.41
SPO20YMR017W HFM1P51979 1187 aa6.27□□□□□ -1.41
SPO20YMR017W ADE8P04161 214 aa6.26□□□□□ -1.41
SPO20YMR017W SCT1P32784 759 aa6.26□□□□□ -1.41
SPO20YMR017W RTA1P53047 317 aa6.26□□□□□ -1.41
SPO20YMR017W TOP3P13099 656 aa6.25□□□□□ -1.41
SPO20YMR017W AFR1P33304 620 aa6.25□□□□□ -1.41
SPO20YMR017W BET3P36149 193 aa6.25□□□□□ -1.41
SPO20YMR017W GIC1P38785 314 aa6.25□□□□□ -1.41
SPO20YMR017W NUP82P40368 713 aa6.25□□□□□ -1.41
SPO20YMR017W ENV11P53246 860 aa6.25□□□□□ -1.41
SPO20YMR017W SRT1Q03175 343 aa6.25□□□□□ -1.41
SPO20YMR017W RIB2Q12362 591 aaKnown RBP6.25□□□□□ -1.41
SPO20YMR017W AIM44Q99299 758 aa6.25□□□□□ -1.41
SPO20YMR017W ERR1P0CX10 437 aa6.24□□□□□ -1.41
SPO20YMR017W ERR2P0CX11 437 aa6.24□□□□□ -1.41
SPO20YMR017W KIN2P13186 1147 aaKnown RBP6.24□□□□□ -1.41
SPO20YMR017W MSD1P15179 658 aaKnown RBP6.24□□□□□ -1.41
SPO20YMR017W NPP1P25353 742 aa6.24□□□□□ -1.41
SPO20YMR017W APL1P27351 700 aa6.24□□□□□ -1.41
SPO20YMR017W FUN30P31380 1131 aa6.24□□□□□ -1.41
SPO20YMR017W POL12P38121 705 aaPredicted RBP6.24□□□□□ -1.41
SPO20YMR017W ERT1P38140 529 aa6.24□□□□□ -1.41
SPO20YMR017W ETP1P38748 585 aaKnown RBP6.24□□□□□ -1.41
SPO20YMR017W NPP2P39997 493 aa6.24□□□□□ -1.41
SPO20YMR017W RSM24Q03976 319 aa6.24□□□□□ -1.41
SPO20YMR017W LCD1Q04377 747 aa6.24□□□□□ -1.41
SPO20YMR017W OSW2Q12202 724 aa6.24□□□□□ -1.41
SPO20YMR017W YPR071WQ12346 211 aa6.24□□□□□ -1.41
SPO20YMR017W PET10P36139 283 aa6.23□□□□□ -1.41
SPO20YMR017W TSL1P38427 1098 aaKnown RBP6.23□□□□□ -1.41
SPO20YMR017W YER158CP40095 573 aa6.23□□□□□ -1.41
SPO20YMR017W GYP7P48365 746 aa6.23□□□□□ -1.41
SPO20YMR017W BUL2Q03758 920 aaKnown RBP6.23□□□□□ -1.41
SPO20YMR017W XYL2Q07993 356 aa6.23□□□□□ -1.41
SPO20YMR017W DFG16Q99234 619 aa6.23□□□□□ -1.41
SPO20YMR017W TOM70P07213 617 aaKnown RBP6.22□□□□□ -1.41
SPO20YMR017W YKR078WP36158 585 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms