RNA–Protein interactions for RNA: YMR004W

MVP1, Transcript of Protein required for sorting proteins to the vacuole, yeast

Gene MVP1, Length 1,536 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MVP1	YMR004W	ACE2	P21192	770 aa		3.03	□□□□□ -1.92
MVP1	YMR004W	MKK2	P32491	506 aa		3.03	□□□□□ -1.92
MVP1	YMR004W	ENT3	P47160	408 aa		3.03	□□□□□ -1.92
MVP1	YMR004W	YGR122W	P53272	402 aa		3.03	□□□□□ -1.92
MVP1	YMR004W	BAS1	P22035	811 aa		3.02	□□□□□ -1.93
MVP1	YMR004W	POA1	P38218	177 aa		3.02	□□□□□ -1.93
MVP1	YMR004W	CHA4	P43634	648 aa		3.02	□□□□□ -1.93
MVP1	YMR004W	SIW14	P53965	281 aa		3.02	□□□□□ -1.93
MVP1	YMR004W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
MVP1	YMR004W	MLS1	P30952	554 aa		3.01	□□□□□ -1.93
MVP1	YMR004W	QRI1	P43123	477 aa	Known RBP	3.01	□□□□□ -1.93
MVP1	YMR004W	RRT14	P40470	206 aa		3	□□□□□ -1.93
MVP1	YMR004W	STU2	P46675	888 aa		3	□□□□□ -1.93
MVP1	YMR004W	LGE1	Q02796	332 aa	Known RBP	3	□□□□□ -1.93
MVP1	YMR004W	KCS1	Q12494	1050 aa		3	□□□□□ -1.93
MVP1	YMR004W	RPP2A	P05319	106 aa	Known RBP	2.99	□□□□□ -1.93
MVP1	YMR004W	SYP1	P25623	870 aa	Known RBP	2.99	□□□□□ -1.93
MVP1	YMR004W	SEC8	P32855	1065 aa		2.99	□□□□□ -1.93
MVP1	YMR004W	CUE2	P36075	443 aa	Known RBP	2.99	□□□□□ -1.93
MVP1	YMR004W	UGA2	P38067	497 aa		2.99	□□□□□ -1.93
MVP1	YMR004W	MGE1	P38523	228 aa		2.99	□□□□□ -1.93
MVP1	YMR004W	IPL1	P38991	367 aa		2.99	□□□□□ -1.93
MVP1	YMR004W	ZRG8	P40021	1076 aa		2.99	□□□□□ -1.93
MVP1	YMR004W	CNN1	P43618	361 aa		2.99	□□□□□ -1.93
MVP1	YMR004W	TMN2	Q04562	672 aa		2.99	□□□□□ -1.93
MVP1	YMR004W	BI4	P03879	638 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	RAD2	P07276	1031 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	HXT13	P39924	564 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	HFM1	P51979	1187 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	HXT17	P53631	564 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	HXT15	P54854	567 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	MRL1	Q06815	381 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	ENB1	Q08299	606 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	ENA1	P13587	1091 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	CYC8	P14922	966 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	DBP5	P20449	482 aa	Known RBP	2.98	□□□□□ -1.93
MVP1	YMR004W	EFT1	P32324	842 aa	Known RBP	2.98	□□□□□ -1.93
MVP1	YMR004W	ASF1	P32447	279 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	MPH1	P40562	993 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	ENA2	Q01896	1091 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	YLR040C	Q07988	224 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	YOL073C	Q08232	322 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	ACM1	Q08981	209 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	LAS17	Q12446	633 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	ENA5	Q12691	1091 aa		2.98	□□□□□ -1.93
MVP1	YMR004W	RPS26A	P39938	119 aa	Known RBP	2.97	□□□□□ -1.93
MVP1	YMR004W	RPS26B	P39939	119 aa	Known RBP	2.97	□□□□□ -1.93
MVP1	YMR004W	MXR1	P40029	184 aa		2.97	□□□□□ -1.93
MVP1	YMR004W	GNP1	P48813	663 aa		2.97	□□□□□ -1.93
MVP1	YMR004W	SEN54	Q02825	467 aa	Predicted RBP	2.97	□□□□□ -1.93
MVP1	YMR004W	MCH5	Q08777	521 aa		2.97	□□□□□ -1.93
MVP1	YMR004W	RAD27	P26793	382 aa		2.96	□□□□□ -1.94
MVP1	YMR004W	BUL1	P48524	976 aa		2.96	□□□□□ -1.94
MVP1	YMR004W	IRC10	Q08118	586 aa		2.96	□□□□□ -1.94
MVP1	YMR004W	RPL11A	P0C0W9	174 aa	Known RBP	2.95	□□□□□ -1.94
MVP1	YMR004W	SLA2	P33338	968 aa		2.95	□□□□□ -1.94
MVP1	YMR004W	SUL1	P38359	859 aa		2.95	□□□□□ -1.94
MVP1	YMR004W	POL32	P47110	350 aa		2.95	□□□□□ -1.94
MVP1	YMR004W	STB4	P50104	949 aa		2.95	□□□□□ -1.94
MVP1	YMR004W	OMS1	Q06668	471 aa		2.95	□□□□□ -1.94
MVP1	YMR004W	XYL2	Q07993	356 aa		2.95	□□□□□ -1.94
MVP1	YMR004W	NPC2	Q12408	173 aa		2.95	□□□□□ -1.94
MVP1	YMR004W	RPL11B	Q3E757	174 aa	Predicted RBP	2.95	□□□□□ -1.94
MVP1	YMR004W	THS1	P04801	734 aa	Known RBP	2.94	□□□□□ -1.94
MVP1	YMR004W	GCR1	P07261	785 aa		2.94	□□□□□ -1.94
MVP1	YMR004W	DBP2	P24783	546 aa	Known RBP	2.94	□□□□□ -1.94
MVP1	YMR004W	KTR4	P38131	464 aa		2.94	□□□□□ -1.94
MVP1	YMR004W	MCM7	P38132	845 aa		2.94	□□□□□ -1.94
MVP1	YMR004W	GEM1	P39722	662 aa		2.94	□□□□□ -1.94
MVP1	YMR004W	ESF1	Q06344	628 aa	Known RBP	2.94	□□□□□ -1.94
MVP1	YMR004W	GNT1	Q12096	491 aa		2.94	□□□□□ -1.94
MVP1	YMR004W	MCM2	P29469	868 aa		2.93	□□□□□ -1.94
MVP1	YMR004W	SPE1	P08432	466 aa		2.93	□□□□□ -1.94
MVP1	YMR004W	NAP1	P25293	417 aa	Known RBP	2.93	□□□□□ -1.94
MVP1	YMR004W	KAR4	P25583	335 aa		2.93	□□□□□ -1.94
MVP1	YMR004W	YAP1801	P38856	637 aa		2.93	□□□□□ -1.94
MVP1	YMR004W	SNF7	P39929	240 aa	Known RBP	2.93	□□□□□ -1.94
MVP1	YMR004W	KRI1	P42846	591 aa	Known RBP	2.93	□□□□□ -1.94
MVP1	YMR004W	YJR107W	P47145	328 aa		2.93	□□□□□ -1.94
MVP1	YMR004W	MTC3	P53077	123 aa		2.93	□□□□□ -1.94
MVP1	YMR004W	NCS6	P53088	359 aa		2.93	□□□□□ -1.94
MVP1	YMR004W	YGR012W	P53206	393 aa		2.93	□□□□□ -1.94
MVP1	YMR004W	CDA1	Q06702	301 aa		2.93	□□□□□ -1.94
MVP1	YMR004W	RTT10	Q08924	1013 aa		2.93	□□□□□ -1.94
MVP1	YMR004W	GUP2	Q08929	609 aa		2.93	□□□□□ -1.94
MVP1	YMR004W	TMA46	Q12000	345 aa	Known RBP	2.93	□□□□□ -1.94
MVP1	YMR004W	ACF2	Q12168	779 aa		2.93	□□□□□ -1.94
MVP1	YMR004W	NDJ1	Q12366	352 aa		2.93	□□□□□ -1.94
MVP1	YMR004W	SCT1	P32784	759 aa		2.92	□□□□□ -1.94
MVP1	YMR004W	RER2	P35196	286 aa		2.92	□□□□□ -1.94
MVP1	YMR004W	TIM44	Q01852	431 aa		2.92	□□□□□ -1.94
MVP1	YMR004W	TIF35	Q04067	274 aa	Known RBP	2.92	□□□□□ -1.94
MVP1	YMR004W	OSW2	Q12202	724 aa		2.92	□□□□□ -1.94
MVP1	YMR004W	ERG4	P25340	473 aa		2.91	□□□□□ -1.94
MVP1	YMR004W	MTH1	P35198	433 aa		2.91	□□□□□ -1.94
MVP1	YMR004W	PNT1	P38969	423 aa		2.91	□□□□□ -1.94
MVP1	YMR004W	URM1	P40554	99 aa	Predicted RBP	2.91	□□□□□ -1.94
MVP1	YMR004W	RMD1	Q03441	430 aa		2.91	□□□□□ -1.94
MVP1	YMR004W	YMR206W	Q03695	313 aa		2.91	□□□□□ -1.94
MVP1	YMR004W	SPR28	Q04921	423 aa		2.91	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 71.5 ms