RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB5	YLR260W	TLG1	Q03322	224 aa		4.14	□□□□□ -1.75
LCB5	YLR260W	BDS1	Q08347	646 aa		4.14	□□□□□ -1.75
LCB5	YLR260W	WTM2	Q12206	467 aa		4.14	□□□□□ -1.75
LCB5	YLR260W	RRI2	Q12348	645 aa		4.14	□□□□□ -1.75
LCB5	YLR260W	ATP4	P05626	244 aa		4.14	□□□□□ -1.75
LCB5	YLR260W	CYT1	P07143	309 aa		4.14	□□□□□ -1.75
LCB5	YLR260W	ERR1	P0CX10	437 aa		4.14	□□□□□ -1.75
LCB5	YLR260W	ERR2	P0CX11	437 aa		4.14	□□□□□ -1.75
LCB5	YLR260W	VAN1	P23642	535 aa		4.14	□□□□□ -1.75
LCB5	YLR260W	NGR1	P32831	672 aa	Known RBP	4.14	□□□□□ -1.75
LCB5	YLR260W	NIT1	P40447	199 aa		4.14	□□□□□ -1.75
LCB5	YLR260W	GSM1	P42950	618 aa		4.14	□□□□□ -1.75
LCB5	YLR260W	THI3	Q07471	609 aa		4.14	□□□□□ -1.75
LCB5	YLR260W	DPH6	Q12429	685 aa		4.14	□□□□□ -1.75
LCB5	YLR260W	CIT1	P00890	479 aa		4.13	□□□□□ -1.75
LCB5	YLR260W	INH1	P01097	85 aa		4.13	□□□□□ -1.75
LCB5	YLR260W	DAT1	P13483	248 aa	Known RBP	4.13	□□□□□ -1.75
LCB5	YLR260W	RPL8A	P17076	256 aa	Known RBP	4.13	□□□□□ -1.75
LCB5	YLR260W	MSM1	P22438	575 aa		4.13	□□□□□ -1.75
LCB5	YLR260W	LCB1	P25045	558 aa	Known RBP	4.13	□□□□□ -1.75
LCB5	YLR260W	TBS1	P38114	1094 aa		4.13	□□□□□ -1.75
LCB5	YLR260W	YGR117C	P53270	476 aa		4.13	□□□□□ -1.75
LCB5	YLR260W	DUS1	P53759	423 aa	Known RBP	4.13	□□□□□ -1.75
LCB5	YLR260W	TIM50	Q02776	476 aa		4.13	□□□□□ -1.75
LCB5	YLR260W	TRS120	Q04183	1289 aa		4.13	□□□□□ -1.75
LCB5	YLR260W	TRS33	Q99394	268 aa		4.13	□□□□□ -1.75
LCB5	YLR260W	SAC3	P46674	1301 aa		4.13	□□□□□ -1.75
LCB5	YLR260W	RPP2B	P02400	110 aa	Known RBP	4.12	□□□□□ -1.75
LCB5	YLR260W	RPS9B	P05755	195 aa	Known RBP	4.12	□□□□□ -1.75
LCB5	YLR260W	CYC8	P14922	966 aa		4.12	□□□□□ -1.75
LCB5	YLR260W	HPR1	P17629	752 aa	Known RBP	4.12	□□□□□ -1.75
LCB5	YLR260W	PRI2	P20457	528 aa		4.12	□□□□□ -1.75
LCB5	YLR260W	AFT1	P22149	690 aa		4.12	□□□□□ -1.75
LCB5	YLR260W	SUV3	P32580	737 aa		4.12	□□□□□ -1.75
LCB5	YLR260W	UTP7	P40055	554 aa	Known RBP	4.12	□□□□□ -1.75
LCB5	YLR260W	NAN1	Q02931	896 aa	Known RBP	4.12	□□□□□ -1.75
LCB5	YLR260W	IRC4	Q03036	179 aa		4.12	□□□□□ -1.75
LCB5	YLR260W	FLC1	Q08967	793 aa		4.12	□□□□□ -1.75
LCB5	YLR260W	RRG1	Q12167	365 aa	Predicted RBP	4.12	□□□□□ -1.75
LCB5	YLR260W	SLA1	P32790	1244 aa		4.12	□□□□□ -1.75
LCB5	YLR260W	ASH1	P34233	588 aa		4.12	□□□□□ -1.75
LCB5	YLR260W	HSE1	P38753	452 aa		4.12	□□□□□ -1.75
LCB5	YLR260W	PNT1	P38969	423 aa		4.12	□□□□□ -1.75
LCB5	YLR260W	CSI1	Q04368	295 aa		4.12	□□□□□ -1.75
LCB5	YLR260W	TDA5	Q06417	326 aa	Known RBP	4.12	□□□□□ -1.75
LCB5	YLR260W	POM152	P39685	1337 aa		4.12	□□□□□ -1.75
LCB5	YLR260W	TY1B-A	O13527	1196 aa	Known RBP	4.11	□□□□□ -1.75
LCB5	YLR260W	RSP5	P39940	809 aa	Known RBP	4.11	□□□□□ -1.75
LCB5	YLR260W	FAA4	P47912	694 aa	Known RBP	4.11	□□□□□ -1.75
LCB5	YLR260W	YGR237C	P50089	785 aa		4.11	□□□□□ -1.75
LCB5	YLR260W	MTC3	P53077	123 aa		4.11	□□□□□ -1.75
LCB5	YLR260W	TYW3	P53177	273 aa		4.11	□□□□□ -1.75
LCB5	YLR260W	ENV11	P53246	860 aa		4.11	□□□□□ -1.75
LCB5	YLR260W	HST3	P53687	447 aa		4.11	□□□□□ -1.75
LCB5	YLR260W	TGL2	P54857	326 aa		4.11	□□□□□ -1.75
LCB5	YLR260W	YPQ2	Q06328	317 aa		4.11	□□□□□ -1.75
LCB5	YLR260W	GRC3	Q07845	632 aa		4.11	□□□□□ -1.75
LCB5	YLR260W	PGI1	P12709	554 aa	Known RBP	4.1	□□□□□ -1.75
LCB5	YLR260W	HSC82	P15108	705 aa	Known RBP	4.1	□□□□□ -1.75
LCB5	YLR260W	MSH2	P25847	964 aa		4.1	□□□□□ -1.75
LCB5	YLR260W	RPS7A	P26786	190 aa	Known RBP	4.1	□□□□□ -1.75
LCB5	YLR260W	PES4	P39684	611 aa		4.1	□□□□□ -1.75
LCB5	YLR260W	SPF1	P39986	1215 aa	Known RBP	4.1	□□□□□ -1.75
LCB5	YLR260W	PEA2	P40091	420 aa		4.1	□□□□□ -1.75
LCB5	YLR260W	GPP1	P41277	250 aa	Known RBP	4.1	□□□□□ -1.75
LCB5	YLR260W	REC8	Q12188	680 aa		4.1	□□□□□ -1.75
LCB5	YLR260W	RTP1	Q12751	981 aa		4.1	□□□□□ -1.75
LCB5	YLR260W	LSO1	Q3E827	93 aa		4.1	□□□□□ -1.75
LCB5	YLR260W	CBP1	P07252	654 aa		4.1	□□□□□ -1.75
LCB5	YLR260W	JNM1	P36224	373 aa		4.1	□□□□□ -1.75
LCB5	YLR260W	DLD3	P39976	496 aa	Known RBP	4.1	□□□□□ -1.75
LCB5	YLR260W	AAD14	P42884	376 aa		4.1	□□□□□ -1.75
LCB5	YLR260W	SXM1	Q04175	944 aa	Known RBP	4.1	□□□□□ -1.75
LCB5	YLR260W	NTG2	Q08214	380 aa		4.1	□□□□□ -1.75
LCB5	YLR260W	RVB2	Q12464	471 aa	Known RBP	4.1	□□□□□ -1.75
LCB5	YLR260W	SRF1	Q12516	437 aa		4.1	□□□□□ -1.75
LCB5	YLR260W	ARG82	P07250	355 aa		4.09	□□□□□ -1.75
LCB5	YLR260W	SFP1	P32432	683 aa		4.09	□□□□□ -1.75
LCB5	YLR260W	GCD6	P32501	712 aa	Known RBP	4.09	□□□□□ -1.75
LCB5	YLR260W	RPT3	P33298	428 aa	Known RBP	4.09	□□□□□ -1.75
LCB5	YLR260W	YKL069W	P36088	180 aa		4.09	□□□□□ -1.75
LCB5	YLR260W	NDE1	P40215	560 aa		4.09	□□□□□ -1.75
LCB5	YLR260W	SUM1	P46676	1062 aa		4.09	□□□□□ -1.75
LCB5	YLR260W	UBX4	P54730	416 aa		4.09	□□□□□ -1.75
LCB5	YLR260W	PRP42	Q03776	544 aa	Known RBP	4.09	□□□□□ -1.75
LCB5	YLR260W	GRX3	Q03835	250 aa		4.09	□□□□□ -1.75
LCB5	YLR260W	MPD2	Q99316	277 aa		4.09	□□□□□ -1.75
LCB5	YLR260W	SSH4	P32343	579 aa		4.09	□□□□□ -1.76
LCB5	YLR260W	PEX6	P33760	1030 aa		4.09	□□□□□ -1.76
LCB5	YLR260W	EXO84	P38261	753 aa		4.09	□□□□□ -1.76
LCB5	YLR260W	SPR3	P41901	512 aa		4.09	□□□□□ -1.76
LCB5	YLR260W	SAM37	P50110	327 aa		4.09	□□□□□ -1.76
LCB5	YLR260W	OPI10	Q08202	246 aa		4.09	□□□□□ -1.76
LCB5	YLR260W	PUS1	Q12211	544 aa	Known RBP	4.09	□□□□□ -1.76
LCB5	YLR260W	FLO1	P32768	1537 aa		4.08	□□□□□ -1.76
LCB5	YLR260W	CYB2	P00175	591 aa		4.08	□□□□□ -1.76
LCB5	YLR260W	RPP0	P05317	312 aa	Known RBP	4.08	□□□□□ -1.76
LCB5	YLR260W	MCM1	P11746	286 aa		4.08	□□□□□ -1.76
LCB5	YLR260W	PTK2	P47116	818 aa	Known RBP	4.08	□□□□□ -1.76
LCB5	YLR260W	HOS2	P53096	452 aa	Predicted RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms