RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C PRE10P21242 288 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
USB1YLR132C SRM1P21827 482 aa5.76□□□□□ -1.49
USB1YLR132C LYP1P32487 611 aa5.76□□□□□ -1.49
USB1YLR132C RFC5P38251 354 aa5.76□□□□□ -1.49
USB1YLR132C OCA5P38738 679 aa5.76□□□□□ -1.49
USB1YLR132C GCN5Q03330 439 aa5.76□□□□□ -1.49
USB1YLR132C PLB2Q03674 706 aa5.76□□□□□ -1.49
USB1YLR132C ROT1Q03691 256 aa5.76□□□□□ -1.49
USB1YLR132C TDA5Q06417 326 aaKnown RBP5.76□□□□□ -1.49
USB1YLR132C OPI10Q08202 246 aa5.76□□□□□ -1.49
USB1YLR132C YOR352WQ08816 343 aa5.76□□□□□ -1.49
USB1YLR132C YOL098CQ12496 1037 aa5.76□□□□□ -1.49
USB1YLR132C PRI2P20457 528 aa5.75□□□□□ -1.49
USB1YLR132C BAS1P22035 811 aa5.75□□□□□ -1.49
USB1YLR132C SRP40P32583 406 aaPredicted RBP5.75□□□□□ -1.49
USB1YLR132C SPT20P50875 604 aa5.75□□□□□ -1.49
USB1YLR132C RSM24Q03976 319 aa5.75□□□□□ -1.49
USB1YLR132C TRP2P00899 507 aaKnown RBP5.74□□□□□ -1.49
USB1YLR132C CMP2P14747 604 aa5.74□□□□□ -1.49
USB1YLR132C MCM7P38132 845 aa5.74□□□□□ -1.49
USB1YLR132C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
USB1YLR132C CLU1Q03690 1277 aaKnown RBP5.74□□□□□ -1.49
USB1YLR132C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49not detected
USB1YLR132C DUS4Q06063 367 aa5.74□□□□□ -1.49
USB1YLR132C SVS1Q12254 260 aa5.74□□□□□ -1.49
USB1YLR132C YTA7P40340 1379 aa5.74□□□□□ -1.49
USB1YLR132C YLR358CO13565 187 aa5.73□□□□□ -1.49
USB1YLR132C GAL10P04397 699 aa5.73□□□□□ -1.49
USB1YLR132C GRX1P25373 110 aaKnown RBP5.73□□□□□ -1.49
USB1YLR132C MXR1P40029 184 aa5.73□□□□□ -1.49
USB1YLR132C EEB1Q02891 456 aa5.73□□□□□ -1.49
USB1YLR132C NAN1Q02931 896 aaKnown RBP5.73□□□□□ -1.49
USB1YLR132C FPR4Q06205 392 aaPredicted RBP5.73□□□□□ -1.49
USB1YLR132C GNT1Q12096 491 aa5.73□□□□□ -1.49
USB1YLR132C YOR131CQ12486 218 aa5.73□□□□□ -1.49
USB1YLR132C RPL11AP0C0W9 174 aaKnown RBP5.72□□□□□ -1.49
USB1YLR132C DBP2P24783 546 aaKnown RBP5.72□□□□□ -1.49
USB1YLR132C SCT1P32784 759 aa5.72□□□□□ -1.49
USB1YLR132C SPO75Q07798 868 aa5.72□□□□□ -1.49
USB1YLR132C RKM4Q12504 494 aa5.72□□□□□ -1.49
USB1YLR132C RPL11BQ3E757 174 aaPredicted RBP5.72□□□□□ -1.49
USB1YLR132C BPT1P14772 1559 aa5.72□□□□□ -1.49
USB1YLR132C ATG2P53855 1592 aa5.72□□□□□ -1.49
USB1YLR132C STI1P15705 589 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
USB1YLR132C AGP1P25376 633 aa5.71□□□□□ -1.5
USB1YLR132C SBA1P28707 216 aaKnown RBP5.71□□□□□ -1.5
USB1YLR132C PIN4P34217 668 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
USB1YLR132C MRP8P35719 219 aa5.71□□□□□ -1.5
USB1YLR132C OSW7P43611 510 aa5.71□□□□□ -1.5
USB1YLR132C ATG13Q06628 738 aa5.71□□□□□ -1.5
USB1YLR132C INO1P11986 533 aa5.7□□□□□ -1.5
USB1YLR132C KIN2P13186 1147 aaKnown RBP5.7□□□□□ -1.5
USB1YLR132C APL1P27351 700 aa5.7□□□□□ -1.5
USB1YLR132C CTS1P29029 562 aa5.7□□□□□ -1.5
USB1YLR132C YKL107WP34251 309 aa5.7□□□□□ -1.5
USB1YLR132C UGA2P38067 497 aa5.7□□□□□ -1.5
USB1YLR132C SPF1P39986 1215 aaKnown RBP5.7□□□□□ -1.5
USB1YLR132C ORC1P54784 914 aaPredicted RBP5.7□□□□□ -1.5
USB1YLR132C SHE9Q04172 456 aa5.7□□□□□ -1.5
USB1YLR132C YLR225CQ05948 407 aaKnown RBP5.7□□□□□ -1.5
USB1YLR132C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
USB1YLR132C ACM1Q08981 209 aa5.7□□□□□ -1.5
USB1YLR132C CDC53Q12018 815 aaKnown RBP5.7□□□□□ -1.5
USB1YLR132C BI4P03879 638 aa5.69□□□□□ -1.5
USB1YLR132C ACE2P21192 770 aa5.69□□□□□ -1.5
USB1YLR132C YKL091CP33324 310 aaKnown RBP5.69□□□□□ -1.5
USB1YLR132C SLA2P33338 968 aa5.69□□□□□ -1.5
USB1YLR132C TAT2P38967 592 aa5.69□□□□□ -1.5
USB1YLR132C SIZ1Q04195 904 aa5.69□□□□□ -1.5
USB1YLR132C YPL066WQ12194 479 aa5.69□□□□□ -1.5
USB1YLR132C XRN1P22147 1528 aaKnown RBP5.69□□□□□ -1.5
USB1YLR132C CDC6P09119 513 aa5.68□□□□□ -1.5
USB1YLR132C ABD1P32783 436 aaPredicted RBP5.68□□□□□ -1.5
USB1YLR132C DOM34P33309 386 aa5.68□□□□□ -1.5
USB1YLR132C MOT2P34909 587 aaKnown RBP5.68□□□□□ -1.5
USB1YLR132C SHM2P37291 469 aaKnown RBP5.68□□□□□ -1.5
USB1YLR132C PNT1P38969 423 aa5.68□□□□□ -1.5
USB1YLR132C IRR1P40541 1150 aa5.68□□□□□ -1.5
USB1YLR132C NSE3Q05541 303 aa5.68□□□□□ -1.5
USB1YLR132C OSH2Q12451 1283 aa5.68□□□□□ -1.5
USB1YLR132C RAD4P14736 754 aa5.67□□□□□ -1.5
USB1YLR132C CDC20P26309 610 aa5.67□□□□□ -1.5
USB1YLR132C YGL176CP46945 554 aa5.67□□□□□ -1.5
USB1YLR132C TIM54P47045 478 aa5.67□□□□□ -1.5
USB1YLR132C SPP382Q06411 708 aaPredicted RBP5.67□□□□□ -1.5
USB1YLR132C GPB1Q08886 897 aa5.67□□□□□ -1.5
USB1YLR132C YKL069WP36088 180 aa5.66□□□□□ -1.5
USB1YLR132C VBA5P36172 582 aa5.66□□□□□ -1.5
USB1YLR132C PBY1P38254 753 aa5.66□□□□□ -1.5
USB1YLR132C MPT5P39016 859 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
USB1YLR132C GEM1P39722 662 aa5.66□□□□□ -1.5
USB1YLR132C MSC2Q03455 724 aa5.66□□□□□ -1.5
USB1YLR132C RXT3Q07458 294 aa5.66□□□□□ -1.5
USB1YLR132C ACK1Q07622 623 aaPredicted RBP5.66□□□□□ -1.5
USB1YLR132C PRP9P19736 530 aaKnown RBP5.65□□□□□ -1.5
USB1YLR132C YBR184WP38299 523 aa5.65□□□□□ -1.5
USB1YLR132C RRT14P40470 206 aa5.65□□□□□ -1.5
USB1YLR132C TPO2P53283 614 aa5.65□□□□□ -1.5
USB1YLR132C SIP5P40210 489 aaKnown RBP5.64□□□□□ -1.51
USB1YLR132C HFM1P51979 1187 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms