RNA–Protein interactions for RNA: YKL125W

RRN3, Transcript of Protein required for transcription of rDNA by RNA polymerase I, yeast

Gene RRN3, Length 1,884 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN3	YKL125W	BDF2	Q07442	638 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	HAT1	Q12341	374 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	OCA6	Q12454	224 aa		5.71	□□□□□ -1.5
RRN3	YKL125W	TY1B-H	O13535	1793 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	TY1B-DR5	P0C2I2	1755 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	TY1B-DR6	P0C2I3	1755 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	TY1B-LR2	P0C2I5	1755 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	5.7	□□□□□ -1.5
RRN3	YKL125W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	5.7	□□□□□ -1.5
RRN3	YKL125W	TY1B-PR2	P0C2J0	1756 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	5.7	□□□□□ -1.5
RRN3	YKL125W	TY1B-JR1	P47098	1755 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	TY1B-ML2	Q03434	1755 aa	Known RBP	5.7	□□□□□ -1.5
RRN3	YKL125W	TY1B-ER1	Q03612	1755 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	TY1B-ML1	Q04711	1755 aa	Known RBP	5.7	□□□□□ -1.5
RRN3	YKL125W	TY1B-GR2	Q12269	1755 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	TY1B-OL	Q12273	1755 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	TY1B-PL	Q12414	1755 aa	Known RBP	5.7	□□□□□ -1.5
RRN3	YKL125W	ITR2	P30606	609 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	NUD1	P32336	851 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	NIP100	P33420	868 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	TIF11	P38912	153 aa	Known RBP	5.7	□□□□□ -1.5
RRN3	YKL125W	YHB1	P39676	399 aa	Known RBP	5.7	□□□□□ -1.5
RRN3	YKL125W	MET10	P39692	1035 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	SCS2	P40075	244 aa	Known RBP	5.7	□□□□□ -1.5
RRN3	YKL125W	GVP36	P40531	326 aa	Known RBP	5.7	□□□□□ -1.5
RRN3	YKL125W	INA22	P40576	216 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	GCD10	P41814	478 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	MDJ2	P42834	146 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	VNX1	P42839	908 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	TRS85	P46944	698 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	FYV8	P46949	817 aa	Known RBP	5.7	□□□□□ -1.5
RRN3	YKL125W	TEL2	P53038	688 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	MAL13	P53338	473 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	HEF3	P53978	1044 aa	Known RBP	5.7	□□□□□ -1.5
RRN3	YKL125W	PNG1	Q02890	363 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	SPO71	Q03868	1245 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	THI22	Q06490	572 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	MCP2	Q06567	569 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	ATG23	Q06671	453 aa		5.7	□□□□□ -1.5
RRN3	YKL125W	RIO1	Q12196	484 aa	Known RBP	5.7	□□□□□ -1.5
RRN3	YKL125W	YBT1	P32386	1661 aa		5.69	□□□□□ -1.5
RRN3	YKL125W	THR1	P17423	357 aa	Known RBP	5.69	□□□□□ -1.5
RRN3	YKL125W	HEM3	P28789	327 aa		5.69	□□□□□ -1.5
RRN3	YKL125W	SLA2	P33338	968 aa		5.69	□□□□□ -1.5
RRN3	YKL125W	YKL222C	P35995	705 aa		5.69	□□□□□ -1.5
RRN3	YKL125W	DBP7	P36120	742 aa	Known RBP	5.69	□□□□□ -1.5
RRN3	YKL125W	TDA11	P38854	504 aa		5.69	□□□□□ -1.5
RRN3	YKL125W	FYV10	P40492	516 aa		5.69	□□□□□ -1.5
RRN3	YKL125W	RLP7	P40693	322 aa	Known RBP	5.69	□□□□□ -1.5
RRN3	YKL125W	MIC19	P43594	170 aa		5.69	□□□□□ -1.5
RRN3	YKL125W	DAS1	P47005	663 aa		5.69	□□□□□ -1.5
RRN3	YKL125W	SGM1	P47166	707 aa		5.69	□□□□□ -1.5
RRN3	YKL125W	APT1	P49435	187 aa	Known RBP	5.69	□□□□□ -1.5
RRN3	YKL125W	YPL109C	Q02981	657 aa		5.69	□□□□□ -1.5
RRN3	YKL125W	SYF1	Q04048	859 aa	Predicted RBP	5.69	□□□□□ -1.5
RRN3	YKL125W	ERF2	Q06551	359 aa		5.69	□□□□□ -1.5
RRN3	YKL125W	RAD1	P06777	1100 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	RPA135	P22138	1203 aa	Known RBP	5.68	□□□□□ -1.5
RRN3	YKL125W	SEC21	P32074	935 aa	Known RBP	5.68	□□□□□ -1.5
RRN3	YKL125W	LOS1	P33418	1100 aa	Predicted RBP	5.68	□□□□□ -1.5
RRN3	YKL125W	TRZ1	P36159	838 aa	Predicted RBP	5.68	□□□□□ -1.5
RRN3	YKL125W	BOI1	P38041	980 aa	Known RBP	5.68	□□□□□ -1.5
RRN3	YKL125W	TAF5	P38129	798 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	VTC2	P43585	828 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	YJR008W	P47085	338 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	ENP2	P48234	707 aa	Known RBP	5.68	□□□□□ -1.5
RRN3	YKL125W	OCA1	P50946	238 aa	Predicted RBP	5.68	□□□□□ -1.5
RRN3	YKL125W	MON1	P53129	644 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	ELA1	P53861	379 aa	Predicted RBP	5.68	□□□□□ -1.5
RRN3	YKL125W	ADA2	Q02336	434 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	JIP5	Q06214	492 aa	Predicted RBP	5.68	□□□□□ -1.5
RRN3	YKL125W	YBL029C-A	Q3E756	94 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	KRE5	P22023	1365 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	LEU1	P07264	779 aa	Known RBP	5.68	□□□□□ -1.5
RRN3	YKL125W	FUS1	P11710	512 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	ADE2	P21264	571 aa	Known RBP	5.68	□□□□□ -1.5
RRN3	YKL125W	OSM1	P21375	501 aa	Known RBP	5.68	□□□□□ -1.5
RRN3	YKL125W	VAN1	P23642	535 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	GDA1	P32621	518 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	RPC34	P32910	317 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	UGA2	P38067	497 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	RTR1	P40084	226 aa	Predicted RBP	5.68	□□□□□ -1.5
RRN3	YKL125W	IML2	P47031	731 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	NMA111	P53920	997 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	TBF1	Q02457	562 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	RTT10	Q08924	1013 aa		5.68	□□□□□ -1.5
RRN3	YKL125W	ADE6	P38972	1358 aa	Known RBP	5.67	□□□□□ -1.5
RRN3	YKL125W	DUR1,2	P32528	1835 aa	Known RBP	5.67	□□□□□ -1.5
RRN3	YKL125W	DPS1	P04802	557 aa	Known RBP	5.67	□□□□□ -1.5
RRN3	YKL125W	KGD2	P19262	463 aa	Predicted RBP	5.67	□□□□□ -1.5
RRN3	YKL125W	MRPL25	P23369	157 aa		5.67	□□□□□ -1.5
RRN3	YKL125W	SEC8	P32855	1065 aa		5.67	□□□□□ -1.5
RRN3	YKL125W	FZO1	P38297	855 aa		5.67	□□□□□ -1.5
RRN3	YKL125W	YHR020W	P38708	688 aa	Known RBP	5.67	□□□□□ -1.5
RRN3	YKL125W	TMN3	P40071	706 aa		5.67	□□□□□ -1.5
RRN3	YKL125W	AXL1	P40851	1208 aa		5.67	□□□□□ -1.5
RRN3	YKL125W	COG6	P53959	839 aa		5.67	□□□□□ -1.5
RRN3	YKL125W	ECM23	Q02710	187 aa		5.67	□□□□□ -1.5
RRN3	YKL125W	PEX29	Q03370	554 aa		5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms