RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C RAD18P10862 487 aa4.42□□□□□ -1.7
SGN1YIR001C PDC6P26263 563 aaKnown RBP4.42□□□□□ -1.7
SGN1YIR001C SHM1P37292 490 aaPredicted RBP4.42□□□□□ -1.7
SGN1YIR001C FKS1P38631 1876 aaKnown RBP4.42□□□□□ -1.7
SGN1YIR001C FPR3P38911 411 aaKnown RBP4.42□□□□□ -1.7
SGN1YIR001C NOC2P39744 710 aaKnown RBP4.42□□□□□ -1.7
SGN1YIR001C SKP2P42843 763 aa4.42□□□□□ -1.7
SGN1YIR001C IRC8P47046 822 aa4.42□□□□□ -1.7
SGN1YIR001C VPS53P47061 822 aa4.42□□□□□ -1.7
SGN1YIR001C ENP2P48234 707 aaKnown RBP4.42□□□□□ -1.7
SGN1YIR001C ROM1P53046 1155 aa4.42□□□□□ -1.7
SGN1YIR001C YGR125WP53273 1036 aa4.42□□□□□ -1.7
SGN1YIR001C ALD6P54115 500 aaKnown RBP4.42□□□□□ -1.7
SGN1YIR001C ECM23Q02710 187 aa4.42□□□□□ -1.7
SGN1YIR001C PUF6Q04373 656 aaKnown RBP4.42□□□□□ -1.7
SGN1YIR001C CDC45Q08032 650 aa4.42□□□□□ -1.7
SGN1YIR001C YDR524C-BQ3E6R4 66 aa4.42□□□□□ -1.7
SGN1YIR001C LEU1P07264 779 aaKnown RBP4.41□□□□□ -1.7
SGN1YIR001C UTR4P32626 227 aa4.41□□□□□ -1.7
SGN1YIR001C YHR131CP38835 850 aa4.41□□□□□ -1.7
SGN1YIR001C SLN1P39928 1220 aaPredicted RBP4.41□□□□□ -1.7
SGN1YIR001C IOC3P43596 787 aa4.41□□□□□ -1.7
SGN1YIR001C YGL242CP53066 181 aa4.41□□□□□ -1.7
SGN1YIR001C MCM6P53091 1017 aaKnown RBP4.41□□□□□ -1.7
SGN1YIR001C SPO1P53541 631 aa4.41□□□□□ -1.7
SGN1YIR001C SLD5Q03406 294 aa4.41□□□□□ -1.7
SGN1YIR001C MRD1Q06106 887 aaKnown RBP4.41□□□□□ -1.7
SGN1YIR001C SKG3Q06315 1026 aa4.41□□□□□ -1.7
SGN1YIR001C SYT1Q06836 1226 aa4.41□□□□□ -1.7
SGN1YIR001C RPS31P05759 152 aaKnown RBP4.4□□□□□ -1.71
SGN1YIR001C SAM1P10659 382 aaKnown RBP4.4□□□□□ -1.71
SGN1YIR001C PUP1P25043 261 aa4.4□□□□□ -1.71
SGN1YIR001C MCM4P30665 933 aaKnown RBP4.4□□□□□ -1.71
SGN1YIR001C GCD7P32502 381 aaPredicted RBP4.4□□□□□ -1.71
SGN1YIR001C GPT2P36148 743 aa4.4□□□□□ -1.71
SGN1YIR001C GRS1P38088 690 aaKnown RBP4.4□□□□□ -1.71
SGN1YIR001C PBY1P38254 753 aa4.4□□□□□ -1.71
SGN1YIR001C RTS1P38903 757 aa4.4□□□□□ -1.71
SGN1YIR001C RRP8P38961 392 aaKnown RBP4.4□□□□□ -1.71
SGN1YIR001C VPS8P39702 1274 aa4.4□□□□□ -1.71
SGN1YIR001C JHD1P40034 492 aa4.4□□□□□ -1.71
SGN1YIR001C MLC1P53141 149 aa4.4□□□□□ -1.71
SGN1YIR001C KRE33P53914 1056 aaKnown RBP4.4□□□□□ -1.71
SGN1YIR001C RTP1Q12751 981 aa4.4□□□□□ -1.71
SGN1YIR001C YDR034W-BQ6Q5X2 51 aa4.4□□□□□ -1.71
SGN1YIR001C RAD2P07276 1031 aa4.39□□□□□ -1.71
SGN1YIR001C SAM2P19358 384 aaKnown RBP4.39□□□□□ -1.71
SGN1YIR001C ACE2P21192 770 aa4.39□□□□□ -1.71
SGN1YIR001C FPS1P23900 669 aa4.39□□□□□ -1.71
SGN1YIR001C CHS3P29465 1165 aa4.39□□□□□ -1.71
SGN1YIR001C UBX7P38349 436 aa4.39□□□□□ -1.71
SGN1YIR001C VID27P40157 782 aa4.39□□□□□ -1.71
SGN1YIR001C YMR147WP40218 223 aaKnown RBP4.39□□□□□ -1.71
SGN1YIR001C YIL092WP40497 633 aa4.39□□□□□ -1.71
SGN1YIR001C RSC8P43609 557 aaKnown RBP4.39□□□□□ -1.71
SGN1YIR001C YNR014WP53719 212 aa4.39□□□□□ -1.71
SGN1YIR001C RVB2Q12464 471 aaKnown RBP4.39□□□□□ -1.71
SGN1YIR001C Q0182Q9ZZW1 134 aa4.39□□□□□ -1.71
SGN1YIR001C PDR18P53756 1333 aa4.39□□□□□ -1.71
SGN1YIR001C POX1P13711 748 aa4.38□□□□□ -1.71
SGN1YIR001C YUR1P26725 428 aa4.38□□□□□ -1.71
SGN1YIR001C MLF3P32047 452 aa4.38□□□□□ -1.71
SGN1YIR001C SEC8P32855 1065 aa4.38□□□□□ -1.71
SGN1YIR001C TIM23P32897 222 aa4.38□□□□□ -1.71
SGN1YIR001C TFC4P33339 1025 aa4.38□□□□□ -1.71
SGN1YIR001C MRPL16P38064 232 aa4.38□□□□□ -1.71
SGN1YIR001C KTR3P38130 404 aaPredicted RBP4.38□□□□□ -1.71
SGN1YIR001C HXT5P38695 592 aa4.38□□□□□ -1.71
SGN1YIR001C FOL2P51601 243 aaKnown RBP4.38□□□□□ -1.71
SGN1YIR001C YRB30P53107 440 aaPredicted RBP4.38□□□□□ -1.71
SGN1YIR001C ALO1P54783 526 aaKnown RBP4.38□□□□□ -1.71
SGN1YIR001C DAK1P54838 584 aaKnown RBP4.38□□□□□ -1.71
SGN1YIR001C ADE12P80210 433 aaKnown RBP4.38□□□□□ -1.71
SGN1YIR001C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
SGN1YIR001C ISA1Q07821 250 aaPredicted RBP4.38□□□□□ -1.71
SGN1YIR001C STB3Q12427 513 aa4.38□□□□□ -1.71
SGN1YIR001C TRM11Q12463 433 aa4.38□□□□□ -1.71
SGN1YIR001C RAD61Q99359 647 aa4.38□□□□□ -1.71
SGN1YIR001C RIF1P29539 1916 aa4.37□□□□□ -1.71
SGN1YIR001C NOT3P06102 836 aaKnown RBP4.37□□□□□ -1.71
SGN1YIR001C RGP1P16664 663 aa4.37□□□□□ -1.71
SGN1YIR001C SHP1P34223 423 aa4.37□□□□□ -1.71
SGN1YIR001C MCR1P36060 302 aaKnown RBP4.37□□□□□ -1.71
SGN1YIR001C PHO88P38264 188 aaPredicted RBP4.37□□□□□ -1.71
SGN1YIR001C VPS45P38932 577 aa4.37□□□□□ -1.71
SGN1YIR001C PES4P39684 611 aa4.37□□□□□ -1.71
SGN1YIR001C POL32P47110 350 aa4.37□□□□□ -1.71
SGN1YIR001C YGL039WP53183 348 aaKnown RBP4.37□□□□□ -1.71
SGN1YIR001C YNL165WP53891 406 aa4.37□□□□□ -1.71
SGN1YIR001C VPS72Q03388 795 aa4.37□□□□□ -1.71
SGN1YIR001C DUS3Q06053 668 aaKnown RBP4.37□□□□□ -1.71
SGN1YIR001C SPH1Q06160 661 aa4.37□□□□□ -1.71
SGN1YIR001C ERP3Q12403 225 aa4.37□□□□□ -1.71
SGN1YIR001C RKM4Q12504 494 aa4.37□□□□□ -1.71
SGN1YIR001C LAM4P38800 1345 aa4.37□□□□□ -1.71
SGN1YIR001C AI1P03875 834 aa4.36□□□□□ -1.71
SGN1YIR001C COQ1P18900 473 aa4.36□□□□□ -1.71
SGN1YIR001C TKL1P23254 680 aaKnown RBP4.36□□□□□ -1.71
SGN1YIR001C TGL1P34163 548 aa4.36□□□□□ -1.71
SGN1YIR001C REG2P38232 338 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms