RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C PRT1P06103 763 aaKnown RBP6.14□□□□□ -1.43
SFB3YHR098C RPL5P26321 297 aaKnown RBP6.14□□□□□ -1.43
SFB3YHR098C SAC6P32599 642 aaKnown RBP6.14□□□□□ -1.43
SFB3YHR098C KAP123P40069 1113 aaKnown RBP6.14□□□□□ -1.43
SFB3YHR098C HFM1P51979 1187 aa6.14□□□□□ -1.43
SFB3YHR098C ORM1P53224 222 aa6.14□□□□□ -1.43
SFB3YHR098C YNL247WP53852 767 aaKnown RBP6.14□□□□□ -1.43
SFB3YHR098C TAF9Q05027 157 aa6.14□□□□□ -1.43
SFB3YHR098C NSE3Q05541 303 aa6.14□□□□□ -1.43
SFB3YHR098C TSR1Q07381 788 aaKnown RBP6.14□□□□□ -1.43
SFB3YHR098C RRP6Q12149 733 aaKnown RBP6.14□□□□□ -1.43
SFB3YHR098C SPO12P17123 173 aa6.13□□□□□ -1.43
SFB3YHR098C BRF1P29056 596 aa6.13□□□□□ -1.43
SFB3YHR098C BOI1P38041 980 aaKnown RBP6.13□□□□□ -1.43
SFB3YHR098C PBP2P38151 413 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
SFB3YHR098C YBL036CP38197 257 aa6.13□□□□□ -1.43
SFB3YHR098C YBR062CP38239 180 aa6.13□□□□□ -1.43
SFB3YHR098C SIP3P38717 1229 aa6.13□□□□□ -1.43
SFB3YHR098C SOL3P38858 249 aa6.13□□□□□ -1.43
SFB3YHR098C UBP6P43593 499 aaKnown RBP6.13□□□□□ -1.43
SFB3YHR098C VPS16Q03308 798 aa6.13□□□□□ -1.43
SFB3YHR098C MPC54Q08550 464 aa6.13□□□□□ -1.43
SFB3YHR098C YOR296WQ08748 1289 aa6.13□□□□□ -1.43
SFB3YHR098C CHS5Q12114 671 aaKnown RBP6.13□□□□□ -1.43
SFB3YHR098C DCS2Q12123 353 aa6.13□□□□□ -1.43
SFB3YHR098C YMR085WP0CF18 432 aa6.13□□□□□ -1.43
SFB3YHR098C PGI1P12709 554 aaKnown RBP6.13□□□□□ -1.43
SFB3YHR098C GAP1P19145 602 aaPredicted RBP6.13□□□□□ -1.43
SFB3YHR098C YJU3P28321 313 aa6.13□□□□□ -1.43
SFB3YHR098C HEK2P38199 381 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
SFB3YHR098C SCS2P40075 244 aaKnown RBP6.13□□□□□ -1.43
SFB3YHR098C ENP2P48234 707 aaKnown RBP6.13□□□□□ -1.43
SFB3YHR098C FMS1P50264 508 aa6.13□□□□□ -1.43
SFB3YHR098C SHE10P53075 577 aa6.13□□□□□ -1.43
SFB3YHR098C GIR2Q03768 265 aaPredicted RBP6.13□□□□□ -1.43
SFB3YHR098C SPC24Q04477 213 aa6.13□□□□□ -1.43
SFB3YHR098C TAL1P15019 335 aaKnown RBP6.12□□□□□ -1.43
SFB3YHR098C GCD6P32501 712 aaKnown RBP6.12□□□□□ -1.43
SFB3YHR098C MIF2P35201 549 aa6.12□□□□□ -1.43
SFB3YHR098C LAS1P36146 502 aaPredicted RBP6.12□□□□□ -1.43
SFB3YHR098C EFM2P38347 419 aa6.12□□□□□ -1.43
SFB3YHR098C NAB3P38996 802 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
SFB3YHR098C MLC1P53141 149 aa6.12□□□□□ -1.43
SFB3YHR098C ATP25Q03153 612 aa6.12□□□□□ -1.43
SFB3YHR098C SLK19Q08581 821 aaKnown RBP6.12□□□□□ -1.43
SFB3YHR098C YIL177CP40434 1758 aa6.12□□□□□ -1.43
SFB3YHR098C YJL225CP40889 1758 aa6.12□□□□□ -1.43
SFB3YHR098C NAT1P12945 854 aaKnown RBP6.12□□□□□ -1.43
SFB3YHR098C CLN1P20437 546 aa6.12□□□□□ -1.43
SFB3YHR098C SLA1P32790 1244 aa6.12□□□□□ -1.43
SFB3YHR098C ATO2P32907 282 aa6.12□□□□□ -1.43
SFB3YHR098C STE13P33894 931 aa6.12□□□□□ -1.43
SFB3YHR098C PTH2P34222 208 aa6.12□□□□□ -1.43
SFB3YHR098C SRL3P36167 246 aa6.12□□□□□ -1.43
SFB3YHR098C SUM1P46676 1062 aa6.12□□□□□ -1.43
SFB3YHR098C RBL2P48606 106 aaKnown RBP6.12□□□□□ -1.43
SFB3YHR098C SRB4P32569 687 aa6.12□□□□□ -1.43
SFB3YHR098C RIB7P33312 244 aa6.12□□□□□ -1.43
SFB3YHR098C OAF3P36023 863 aa6.12□□□□□ -1.43
SFB3YHR098C CCT2P39076 527 aaKnown RBP6.12□□□□□ -1.43
SFB3YHR098C SHE4P51534 789 aa6.12□□□□□ -1.43
SFB3YHR098C ALD6P54115 500 aaKnown RBP6.12□□□□□ -1.43
SFB3YHR098C YDR306CQ06640 478 aa6.12□□□□□ -1.43
SFB3YHR098C ALR1Q08269 859 aa6.12□□□□□ -1.43
SFB3YHR098C RGR1P19263 1082 aa6.11□□□□□ -1.43
SFB3YHR098C UBP1P25037 809 aa6.11□□□□□ -1.43
SFB3YHR098C KES1P35844 434 aaKnown RBP6.11□□□□□ -1.43
SFB3YHR098C AMN1P38285 549 aaPredicted RBP6.11□□□□□ -1.43
SFB3YHR098C ERC1P38767 581 aa6.11□□□□□ -1.43
SFB3YHR098C STB1P42845 420 aa6.11□□□□□ -1.43
SFB3YHR098C PIG1Q06216 648 aa6.11□□□□□ -1.43
SFB3YHR098C TOM70P07213 617 aaKnown RBP6.11□□□□□ -1.43
SFB3YHR098C SUI3P09064 285 aaKnown RBP6.11□□□□□ -1.43
SFB3YHR098C PYC1P11154 1178 aaKnown RBP6.11□□□□□ -1.43
SFB3YHR098C SEC27P41811 889 aaKnown RBP6.11□□□□□ -1.43
SFB3YHR098C ZDS2P54786 942 aa6.11□□□□□ -1.43
SFB3YHR098C VPS64Q03944 604 aa6.11□□□□□ -1.43
SFB3YHR098C NUT2Q06213 157 aa6.11□□□□□ -1.43
SFB3YHR098C JIP5Q06214 492 aaPredicted RBP6.11□□□□□ -1.43
SFB3YHR098C PIN2Q12057 282 aa6.11□□□□□ -1.43
SFB3YHR098C RTP1Q12751 981 aa6.11□□□□□ -1.43
SFB3YHR098C REC107P21651 314 aa6.1□□□□□ -1.43
SFB3YHR098C IMP2'P32351 346 aa6.1□□□□□ -1.43
SFB3YHR098C CSE1P33307 960 aa6.1□□□□□ -1.43
SFB3YHR098C CTM1P38818 585 aa6.1□□□□□ -1.43
SFB3YHR098C FYV8P46949 817 aaKnown RBP6.1□□□□□ -1.43
SFB3YHR098C TY4A-JP47023 414 aa6.1□□□□□ -1.43
SFB3YHR098C HST2P53686 357 aa6.1□□□□□ -1.43
SFB3YHR098C ADE12P80210 433 aaKnown RBP6.1□□□□□ -1.43
SFB3YHR098C ECM23Q02710 187 aa6.1□□□□□ -1.43
SFB3YHR098C UME1Q03010 460 aa6.1□□□□□ -1.43
SFB3YHR098C URH1Q04179 340 aa6.1□□□□□ -1.43
SFB3YHR098C SOV1Q04748 898 aa6.1□□□□□ -1.43
SFB3YHR098C TOS4Q06266 489 aa6.1□□□□□ -1.43
SFB3YHR098C ESF1Q06344 628 aaKnown RBP6.1□□□□□ -1.43
SFB3YHR098C CSR1Q06705 408 aaKnown RBP6.1□□□□□ -1.43
SFB3YHR098C GLE1Q12315 538 aa6.1□□□□□ -1.43
SFB3YHR098C CKI1P20485 582 aa6.1□□□□□ -1.43
SFB3YHR098C MVD1P32377 396 aaKnown RBP6.1□□□□□ -1.43
SFB3YHR098C NUP133P36161 1157 aa6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 335.4 ms