RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C YDR132CQ03900 495 aa6.75□□□□□ -1.33
RTG3YBL103C ATG13Q06628 738 aa6.75□□□□□ -1.33
RTG3YBL103C PIN2Q12057 282 aa6.75□□□□□ -1.33
RTG3YBL103C KIN2P13186 1147 aaKnown RBP6.74□□□□□ -1.33
RTG3YBL103C ACE2P21192 770 aa6.74□□□□□ -1.33
RTG3YBL103C SPT20P50875 604 aa6.74□□□□□ -1.33
RTG3YBL103C SVF1Q05515 481 aa6.74□□□□□ -1.33
RTG3YBL103C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
RTG3YBL103C FLR1P38124 548 aa6.73□□□□□ -1.33
RTG3YBL103C GCN5Q03330 439 aa6.73□□□□□ -1.33
RTG3YBL103C FAL1Q12099 399 aaKnown RBP6.73□□□□□ -1.33
RTG3YBL103C NAP1P25293 417 aaKnown RBP6.73□□□□□ -1.33
RTG3YBL103C YKL222CP35995 705 aa6.73□□□□□ -1.33
RTG3YBL103C SNU71P53207 620 aaKnown RBP6.73□□□□□ -1.33
RTG3YBL103C YCR015CP25616 317 aa6.72□□□□□ -1.33
RTG3YBL103C HFM1P51979 1187 aa6.71□□□□□ -1.34
RTG3YBL103C DUS4Q06063 367 aa6.71□□□□□ -1.34
RTG3YBL103C THS1P04801 734 aaKnown RBP6.7□□□□□ -1.34
RTG3YBL103C PRI2P20457 528 aa6.7□□□□□ -1.34
RTG3YBL103C GIP4P39732 760 aa6.7□□□□□ -1.34
RTG3YBL103C RRT14P40470 206 aa6.7□□□□□ -1.34
RTG3YBL103C PIN4P34217 668 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
RTG3YBL103C MBP1P39678 833 aa6.69□□□□□ -1.34
RTG3YBL103C MTC3P53077 123 aa6.69□□□□□ -1.34
RTG3YBL103C MSC2Q03455 724 aa6.69□□□□□ -1.34
RTG3YBL103C SIZ1Q04195 904 aa6.69□□□□□ -1.34
RTG3YBL103C PRE10P21242 288 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
RTG3YBL103C YKL151CP36059 337 aa6.68□□□□□ -1.34
RTG3YBL103C GTF1P53260 183 aaPredicted RBP6.68□□□□□ -1.34
RTG3YBL103C HRQ1Q05549 1077 aa6.68□□□□□ -1.34
RTG3YBL103C OPI10Q08202 246 aa6.68□□□□□ -1.34
RTG3YBL103C YLR358CO13565 187 aa6.67□□□□□ -1.34
RTG3YBL103C YKL069WP36088 180 aa6.67□□□□□ -1.34
RTG3YBL103C VAC8P39968 578 aa6.67□□□□□ -1.34
RTG3YBL103C ALD6P54115 500 aaKnown RBP6.67□□□□□ -1.34
RTG3YBL103C XYL2Q07993 356 aa6.67□□□□□ -1.34
RTG3YBL103C AGP1P25376 633 aa6.66□□□□□ -1.34
RTG3YBL103C SNF7P39929 240 aaKnown RBP6.66□□□□□ -1.34
RTG3YBL103C GCV2P49095 1034 aa6.66□□□□□ -1.34
RTG3YBL103C GPB1Q08886 897 aa6.66□□□□□ -1.34
RTG3YBL103C SBA1P28707 216 aaKnown RBP6.66□□□□□ -1.34
RTG3YBL103C CLU1Q03690 1277 aaKnown RBP6.66□□□□□ -1.34
RTG3YBL103C RXT3Q07458 294 aa6.66□□□□□ -1.34
RTG3YBL103C CDC6P09119 513 aa6.65□□□□□ -1.35
RTG3YBL103C VBA5P36172 582 aa6.65□□□□□ -1.35
RTG3YBL103C PBP1P53297 722 aaKnown RBP6.65□□□□□ -1.35
RTG3YBL103C CDC20P26309 610 aa6.64□□□□□ -1.35
RTG3YBL103C PAM1P37304 830 aaKnown RBP6.64□□□□□ -1.35
RTG3YBL103C KRI1P42846 591 aaKnown RBP6.64□□□□□ -1.35
RTG3YBL103C ACK1Q07622 623 aaPredicted RBP6.64□□□□□ -1.35
RTG3YBL103C MDM38Q08179 573 aa6.64□□□□□ -1.35
RTG3YBL103C OSW2Q12202 724 aa6.64□□□□□ -1.35
RTG3YBL103C DOM34P33309 386 aa6.63□□□□□ -1.35
RTG3YBL103C SAH1P39954 449 aaKnown RBP6.63□□□□□ -1.35
RTG3YBL103C YAP1801P38856 637 aa6.62□□□□□ -1.35
RTG3YBL103C TAT2P38967 592 aa6.62□□□□□ -1.35
RTG3YBL103C ENA1P13587 1091 aa6.61□□□□□ -1.35
RTG3YBL103C EMC1P25574 760 aa6.61□□□□□ -1.35
RTG3YBL103C ZRG8P40021 1076 aa6.61□□□□□ -1.35
RTG3YBL103C MND2P40577 368 aa6.61□□□□□ -1.35
RTG3YBL103C ENA2Q01896 1091 aa6.61□□□□□ -1.35
RTG3YBL103C YAP6Q03935 383 aa6.61□□□□□ -1.35
RTG3YBL103C YLL058WQ12198 575 aa6.61□□□□□ -1.35
RTG3YBL103C ENA5Q12691 1091 aa6.61□□□□□ -1.35
RTG3YBL103C SHM2P37291 469 aaKnown RBP6.6□□□□□ -1.35
RTG3YBL103C MPT5P39016 859 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
RTG3YBL103C VPS62P53285 467 aa6.6□□□□□ -1.35
RTG3YBL103C SRT1Q03175 343 aa6.6□□□□□ -1.35
RTG3YBL103C SHE9Q04172 456 aa6.6□□□□□ -1.35
RTG3YBL103C HMI1Q12039 706 aa6.6□□□□□ -1.35
RTG3YBL103C CTS1P29029 562 aa6.6□□□□□ -1.35
RTG3YBL103C GIC1P38785 314 aa6.6□□□□□ -1.35
RTG3YBL103C DUS3Q06053 668 aaKnown RBP6.6□□□□□ -1.35
RTG3YBL103C NPP2P39997 493 aa6.59□□□□□ -1.36
RTG3YBL103C SRP1Q02821 542 aaKnown RBP6.59□□□□□ -1.36
RTG3YBL103C TPO1Q07824 586 aa6.59□□□□□ -1.36
RTG3YBL103C CDC12P32468 407 aaKnown RBP6.58□□□□□ -1.36
RTG3YBL103C LST4P34239 828 aa6.58□□□□□ -1.36
RTG3YBL103C TMA10Q06177 86 aa6.58□□□□□ -1.36
RTG3YBL103C FUN30P31380 1131 aa6.57□□□□□ -1.36
RTG3YBL103C ECM21P38167 1117 aaKnown RBP6.57□□□□□ -1.36
RTG3YBL103C YLR224WQ05947 369 aa6.57□□□□□ -1.36
RTG3YBL103C SRP101P32916 621 aa6.56□□□□□ -1.36
RTG3YBL103C POA1P38218 177 aa6.56□□□□□ -1.36
RTG3YBL103C SPF1P39986 1215 aaKnown RBP6.56□□□□□ -1.36
RTG3YBL103C YGR012WP53206 393 aa6.56□□□□□ -1.36
RTG3YBL103C SFB2P53953 876 aa6.56□□□□□ -1.36
RTG3YBL103C TDA5Q06417 326 aaKnown RBP6.56□□□□□ -1.36
RTG3YBL103C YDR306CQ06640 478 aa6.56□□□□□ -1.36
RTG3YBL103C STE5P32917 917 aa6.55□□□□□ -1.36
RTG3YBL103C MRP8P35719 219 aa6.55□□□□□ -1.36
RTG3YBL103C CDA1Q06702 301 aa6.55□□□□□ -1.36
RTG3YBL103C ADY3Q07732 790 aa6.55□□□□□ -1.36
RTG3YBL103C GUS1P46655 708 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
RTG3YBL103C MCM6P53091 1017 aaKnown RBP6.54□□□□□ -1.36
RTG3YBL103C MET12P46151 657 aa6.53□□□□□ -1.36
RTG3YBL103C NOP12Q08208 459 aaKnown RBP6.53□□□□□ -1.36
RTG3YBL103C PPH3P32345 308 aa6.53□□□□□ -1.36
RTG3YBL103C PBY1P38254 753 aa6.53□□□□□ -1.36
RTG3YBL103C YBR184WP38299 523 aa6.53□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms