RNA–Protein interactions for RNA: ENST00000641625.1

CASC19-246, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,606 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-246ENST00000641625 RTF1Q92541 710 aaKnown RBP8.47□□□□□ -1.05
CASC19-246ENST00000641625 PLEKHF1Q96S99 279 aa8.47□□□□□ -1.05
CASC19-246ENST00000641625 C4BP0C0L5 1744 aa8.47□□□□□ -1.05
CASC19-246ENST00000641625 SSFA2P28290 1259 aa8.47□□□□□ -1.05
CASC19-246ENST00000641625 SMIM5Q71RC9 77 aa8.47□□□□□ -1.05
CASC19-246ENST00000641625 MCM10Q7L590 875 aa8.47□□□□□ -1.05
CASC19-246ENST00000641625 SGIP1Q9BQI5 828 aa8.47□□□□□ -1.05
CASC19-246ENST00000641625 MAPK8IP3Q9UPT6 1336 aa8.46□□□□□ -1.05
CASC19-246ENST00000641625 DCTN1Q14203 1278 aa8.46□□□□□ -1.06
CASC19-246ENST00000641625 TTC5Q8N0Z6 440 aa8.46□□□□□ -1.06
CASC19-246ENST00000641625 PNNQ9H307 717 aaKnown RBP8.46□□□□□ -1.06
CASC19-246ENST00000641625 TAF1LQ8IZX4 1826 aa8.46□□□□□ -1.06
CASC19-246ENST00000641625 TUBGCP6Q96RT7 1819 aa8.45□□□□□ -1.06
CASC19-246ENST00000641625 HTATSF1O43719 755 aaKnown RBP8.45□□□□□ -1.06
CASC19-246ENST00000641625 WDR43Q15061 677 aaKnown RBP eCLIP8.45□□□□□ -1.06
CASC19-246ENST00000641625 NFE2L2Q16236 605 aa8.45□□□□□ -1.06
CASC19-246ENST00000641625 RC3H1Q5TC82 1133 aaKnown RBP8.45□□□□□ -1.06
CASC19-246ENST00000641625 MSL1Q68DK7 614 aa8.45□□□□□ -1.06
CASC19-246ENST00000641625 ZNF790Q6PG37 636 aa8.45□□□□□ -1.06
CASC19-246ENST00000641625 RTCBQ9Y3I0 505 aaKnown RBP8.45□□□□□ -1.06
CASC19-246ENST00000641625 QSER1Q2KHR3 1735 aa8.45□□□□□ -1.06
CASC19-246ENST00000641625 KCPQ6ZWJ8 1503 aa8.45□□□□□ -1.06
CASC19-246ENST00000641625 CNTNAP4Q9C0A0 1308 aa8.45□□□□□ -1.06
CASC19-246ENST00000641625 ZNF831Q5JPB2 1677 aa8.45□□□□□ -1.06
CASC19-246ENST00000641625 BTBD11A6QL63 1104 aa8.44□□□□□ -1.06
CASC19-246ENST00000641625 POLD1P28340 1107 aa8.44□□□□□ -1.06
CASC19-246ENST00000641625 CRKLP46109 303 aaKnown RBP8.44□□□□□ -1.06
CASC19-246ENST00000641625 DNAJC10Q8IXB1 793 aa8.44□□□□□ -1.06
CASC19-246ENST00000641625 ZNF496Q96IT1 587 aaPredicted RBP8.44□□□□□ -1.06
CASC19-246ENST00000641625 RPS6KA4O75676 772 aa8.43□□□□□ -1.06
CASC19-246ENST00000641625 CCDC146Q8IYE0 955 aa8.43□□□□□ -1.06
CASC19-246ENST00000641625 FHDC1Q9C0D6 1143 aaPredicted RBP8.43□□□□□ -1.06
CASC19-246ENST00000641625 UBR3Q6ZT12 1888 aa8.43□□□□□ -1.06
CASC19-246ENST00000641625 KCNQ3O43525 872 aa8.43□□□□□ -1.06
CASC19-246ENST00000641625 CYP19A1P11511 503 aaPredicted RBP8.43□□□□□ -1.06
CASC19-246ENST00000641625 TRAPPC3LQ5T215 181 aa8.43□□□□□ -1.06
CASC19-246ENST00000641625 INTS5Q6P9B9 1019 aaKnown RBP8.43□□□□□ -1.06
CASC19-246ENST00000641625 THUMPD2Q9BTF0 503 aaKnown RBP8.43□□□□□ -1.06
CASC19-246ENST00000641625 CCDC87Q9NVE4 849 aa8.43□□□□□ -1.06
CASC19-246ENST00000641625 ADAMTS8Q9UP79 889 aa8.43□□□□□ -1.06
CASC19-246ENST00000641625 COL5A3P25940 1745 aaPredicted RBP8.43□□□□□ -1.06
CASC19-246ENST00000641625 HEG1Q9ULI3 1381 aa8.43□□□□□ -1.06
CASC19-246ENST00000641625 CICQ96RK0 1608 aaPredicted RBP8.42□□□□□ -1.06
CASC19-246ENST00000641625 ANP32CO43423 234 aa8.42□□□□□ -1.06
CASC19-246ENST00000641625 STARD3NLO95772 234 aa8.42□□□□□ -1.06
CASC19-246ENST00000641625 RFC4P35249 363 aa8.42□□□□□ -1.06
CASC19-246ENST00000641625 RIPK4P57078 832 aa8.42□□□□□ -1.06
CASC19-246ENST00000641625 TAF7Q15545 349 aaPredicted RBP8.42□□□□□ -1.06
CASC19-246ENST00000641625 ARHGEF1Q92888 912 aaKnown RBP8.42□□□□□ -1.06
CASC19-246ENST00000641625 FMNL2Q96PY5 1086 aa8.42□□□□□ -1.06
CASC19-246ENST00000641625 SYT17Q9BSW7 474 aa8.42□□□□□ -1.06
CASC19-246ENST00000641625 TJP1Q07157 1748 aa8.41□□□□□ -1.06
CASC19-246ENST00000641625 VIRMAQ69YN4 1812 aaKnown RBP8.41□□□□□ -1.06
CASC19-246ENST00000641625 TMPOP42166 694 aaKnown RBP8.41□□□□□ -1.06
CASC19-246ENST00000641625 CCDC184Q52MB2 194 aa8.41□□□□□ -1.06
CASC19-246ENST00000641625 KLHL34Q8N239 644 aa8.41□□□□□ -1.06
CASC19-246ENST00000641625 RUNDC1Q96C34 613 aa8.41□□□□□ -1.06
CASC19-246ENST00000641625 MIS18AQ9NYP9 233 aa8.41□□□□□ -1.06
CASC19-246ENST00000641625 ZBTB1Q9Y2K1 713 aa8.41□□□□□ -1.06
CASC19-246ENST00000641625 RRP7AQ9Y3A4 280 aaKnown RBP8.41□□□□□ -1.06
CASC19-246ENST00000641625 SIPA1L3O60292 1781 aaPredicted RBP8.41□□□□□ -1.06
CASC19-246ENST00000641625 UBR2Q8IWV8 1755 aa8.41□□□□□ -1.06
CASC19-246ENST00000641625 MYH14Q7Z406 1995 aaKnown RBP8.41□□□□□ -1.06
CASC19-246ENST00000641625 SOS1Q07889 1333 aaPredicted RBP8.4□□□□□ -1.06
CASC19-246ENST00000641625 NEUROD2Q15784 382 aa8.4□□□□□ -1.06
CASC19-246ENST00000641625 TEX13AQ9BXU3 409 aaPredicted RBP8.4□□□□□ -1.06
CASC19-246ENST00000641625 PODXL2Q9NZ53 605 aa8.4□□□□□ -1.06
CASC19-246ENST00000641625 USP42Q9H9J4 1324 aaKnown RBP8.4□□□□□ -1.07
CASC19-246ENST00000641625 GYS1P13807 737 aa8.4□□□□□ -1.07
CASC19-246ENST00000641625 LMOD3Q0VAK6 560 aa8.4□□□□□ -1.07
CASC19-246ENST00000641625 PNISRQ8TF01 805 aaKnown RBP8.4□□□□□ -1.07
CASC19-246ENST00000641625 SRP68Q9UHB9 627 aaKnown RBP8.4□□□□□ -1.07
CASC19-246ENST00000641625 COL24A1Q17RW2 1714 aa8.39□□□□□ -1.07
CASC19-246ENST00000641625 COL15A1P39059 1388 aa8.39□□□□□ -1.07
CASC19-246ENST00000641625 PRAMEF22A3QJZ6 481 aa8.39□□□□□ -1.07
CASC19-246ENST00000641625 MMP10P09238 476 aa8.39□□□□□ -1.07
CASC19-246ENST00000641625 SNRPA1P09661 255 aaKnown RBP8.39□□□□□ -1.07
CASC19-246ENST00000641625 CANXP27824 592 aaKnown RBP8.39□□□□□ -1.07
CASC19-246ENST00000641625 NLGN1Q8N2Q7 840 aa8.39□□□□□ -1.07
CASC19-246ENST00000641625 MRS2Q9HD23 443 aa8.39□□□□□ -1.07
CASC19-246ENST00000641625 ZPR1O75312 459 aa8.38□□□□□ -1.07
CASC19-246ENST00000641625 A1BGP04217 495 aa8.38□□□□□ -1.07
CASC19-246ENST00000641625 SPOCK2Q92563 424 aa8.38□□□□□ -1.07
CASC19-246ENST00000641625 TRIM35Q9UPQ4 493 aa8.38□□□□□ -1.07
CASC19-246ENST00000641625 USP16Q9Y5T5 823 aa8.38□□□□□ -1.07
CASC19-246ENST00000641625 DLG5Q8TDM6 1919 aa8.38□□□□□ -1.07
CASC19-246ENST00000641625 APAF1O14727 1248 aa8.37□□□□□ -1.07
CASC19-246ENST00000641625 EIF5P55010 431 aaKnown RBP8.37□□□□□ -1.07
CASC19-246ENST00000641625 EIF4A1P60842 406 aaKnown RBP8.37□□□□□ -1.07
CASC19-246ENST00000641625 NLGN2Q8NFZ4 835 aa8.37□□□□□ -1.07
CASC19-246ENST00000641625 TSPYL4Q9UJ04 414 aa8.37□□□□□ -1.07
CASC19-246ENST00000641625 ZNF330Q9Y3S2 320 aaPredicted RBP8.37□□□□□ -1.07
CASC19-246ENST00000641625 CD2APQ9Y5K6 639 aa8.37□□□□□ -1.07
CASC19-246ENST00000641625 GIGYF1O75420 1035 aaPredicted RBP8.36□□□□□ -1.07
CASC19-246ENST00000641625 IL6STP40189 918 aaPredicted RBP8.36□□□□□ -1.07
CASC19-246ENST00000641625 PIP4K2AP48426 406 aaPredicted RBP8.36□□□□□ -1.07
CASC19-246ENST00000641625 USPL1Q5W0Q7 1092 aa8.36□□□□□ -1.07
CASC19-246ENST00000641625 NARFQ9UHQ1 456 aa8.36□□□□□ -1.07
CASC19-246ENST00000641625 C4AP0C0L4 1744 aa8.36□□□□□ -1.07
CASC19-246ENST00000641625 A0A087WZG4 1122 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms