RNA–Protein interactions for RNA: ENST00000640311.1

KCNMA1-280, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 3

Gene KCNMA1, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-280ENST00000640311 TEX13AQ9BXU3 409 aaPredicted RBP13.28□□□□□ -0.28
KCNMA1-280ENST00000640311 MIS18AQ9NYP9 233 aa13.28□□□□□ -0.28
KCNMA1-280ENST00000640311 HEG1Q9ULI3 1381 aa13.28□□□□□ -0.28
KCNMA1-280ENST00000640311 CANXP27824 592 aaKnown RBP13.27□□□□□ -0.29
KCNMA1-280ENST00000640311 LMOD3Q0VAK6 560 aa13.27□□□□□ -0.29
KCNMA1-280ENST00000640311 INTS5Q6P9B9 1019 aaKnown RBP13.27□□□□□ -0.29
KCNMA1-280ENST00000640311 PNISRQ8TF01 805 aaKnown RBP13.27□□□□□ -0.29
KCNMA1-280ENST00000640311 COL5A3P25940 1745 aaPredicted RBP13.27□□□□□ -0.29
KCNMA1-280ENST00000640311 UBR3Q6ZT12 1888 aa13.27□□□□□ -0.29
KCNMA1-280ENST00000640311 TJP1Q07157 1748 aa13.26□□□□□ -0.29
KCNMA1-280ENST00000640311 NPM2Q86SE8 214 aaKnown RBP13.26□□□□□ -0.29
KCNMA1-280ENST00000640311 SYT17Q9BSW7 474 aa13.26□□□□□ -0.29
KCNMA1-280ENST00000640311 MRS2Q9HD23 443 aa13.26□□□□□ -0.29
KCNMA1-280ENST00000640311 ZBTB1Q9Y2K1 713 aa13.26□□□□□ -0.29
KCNMA1-280ENST00000640311 ZNF330Q9Y3S2 320 aaPredicted RBP13.26□□□□□ -0.29
KCNMA1-280ENST00000640311 ZPR1O75312 459 aa13.25□□□□□ -0.29
KCNMA1-280ENST00000640311 CCDC184Q52MB2 194 aa13.25□□□□□ -0.29
KCNMA1-280ENST00000640311 NLGN1Q8N2Q7 840 aa13.25□□□□□ -0.29
KCNMA1-280ENST00000640311 SIPA1L3O60292 1781 aaPredicted RBP13.25□□□□□ -0.29
KCNMA1-280ENST00000640311 SNRPA1P09661 255 aaKnown RBP13.24□□□□□ -0.29
KCNMA1-280ENST00000640311 UBR2Q8IWV8 1755 aa13.24□□□□□ -0.29
KCNMA1-280ENST00000640311 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-280ENST00000640311 MMP10P09238 476 aa13.23□□□□□ -0.29
KCNMA1-280ENST00000640311 GYS1P13807 737 aa13.23□□□□□ -0.29
KCNMA1-280ENST00000640311 SRP68Q9UHB9 627 aaKnown RBP13.23□□□□□ -0.29
KCNMA1-280ENST00000640311 TSPYL4Q9UJ04 414 aa13.23□□□□□ -0.29
KCNMA1-280ENST00000640311 LAS1LQ9Y4W2 734 aaKnown RBP13.23□□□□□ -0.29
KCNMA1-280ENST00000640311 USP16Q9Y5T5 823 aa13.23□□□□□ -0.29
KCNMA1-280ENST00000640311 CICQ96RK0 1608 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-280ENST00000640311 COL15A1P39059 1388 aa13.22□□□□□ -0.29
KCNMA1-280ENST00000640311 USP42Q9H9J4 1324 aaKnown RBP13.22□□□□□ -0.29
KCNMA1-280ENST00000640311 DLG5Q8TDM6 1919 aa13.22□□□□□ -0.29
KCNMA1-280ENST00000640311 PRAMEF22A3QJZ6 481 aa13.22□□□□□ -0.29
KCNMA1-280ENST00000640311 APAF1O14727 1248 aa13.22□□□□□ -0.29
KCNMA1-280ENST00000640311 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
KCNMA1-280ENST00000640311 A1BGP04217 495 aa13.22□□□□□ -0.29
KCNMA1-280ENST00000640311 USPL1Q5W0Q7 1092 aa13.22□□□□□ -0.29
KCNMA1-280ENST00000640311 PARP3Q9Y6F1 533 aa13.21□□□□□ -0.29
KCNMA1-280ENST00000640311 MYH14Q7Z406 1995 aaKnown RBP13.2□□□□□ -0.3
KCNMA1-280ENST00000640311 A0A087WZG4 1122 aa13.2□□□□□ -0.3
KCNMA1-280ENST00000640311 PIP4K2AP48426 406 aaPredicted RBP13.2□□□□□ -0.3
KCNMA1-280ENST00000640311 FKBP8Q14318 412 aa13.2□□□□□ -0.3
KCNMA1-280ENST00000640311 PELP1Q8IZL8 1130 aaKnown RBP13.2□□□□□ -0.3
KCNMA1-280ENST00000640311 NLGN2Q8NFZ4 835 aa13.2□□□□□ -0.3
KCNMA1-280ENST00000640311 NARFQ9UHQ1 456 aa13.2□□□□□ -0.3
KCNMA1-280ENST00000640311 TRIM35Q9UPQ4 493 aa13.2□□□□□ -0.3
KCNMA1-280ENST00000640311 COL24A1Q17RW2 1714 aa13.19□□□□□ -0.3
KCNMA1-280ENST00000640311 SENP3-EIF4A1A0A087X0R7 540 aa13.19□□□□□ -0.3
KCNMA1-280ENST00000640311 IL6STP40189 918 aaPredicted RBP13.19□□□□□ -0.3
KCNMA1-280ENST00000640311 EIF5P55010 431 aaKnown RBP13.19□□□□□ -0.3
KCNMA1-280ENST00000640311 EIF4A1P60842 406 aaKnown RBP13.19□□□□□ -0.3
KCNMA1-280ENST00000640311 GPR162Q16538 588 aa13.19□□□□□ -0.3
KCNMA1-280ENST00000640311 TBC1D2BQ9UPU7 963 aa13.19□□□□□ -0.3
KCNMA1-280ENST00000640311 CD2APQ9Y5K6 639 aa13.19□□□□□ -0.3
KCNMA1-280ENST00000640311 GIGYF1O75420 1035 aaPredicted RBP13.18□□□□□ -0.3
KCNMA1-280ENST00000640311 BABAM1Q9NWV8 329 aa13.18□□□□□ -0.3
KCNMA1-280ENST00000640311 C4AP0C0L4 1744 aa13.18□□□□□ -0.3
KCNMA1-280ENST00000640311 BICDL1Q6ZP65 573 aa13.17□□□□□ -0.3
KCNMA1-280ENST00000640311 FAM9BQ8IZU0 186 aa13.17□□□□□ -0.3
KCNMA1-280ENST00000640311 EIF2S2P20042 333 aaKnown RBP13.16□□□□□ -0.3
KCNMA1-280ENST00000640311 CALD1Q05682 793 aaKnown RBP13.16□□□□□ -0.3
KCNMA1-280ENST00000640311 DZIP3Q86Y13 1208 aaKnown RBP13.16□□□□□ -0.3
KCNMA1-280ENST00000640311 NGEFQ8N5V2 710 aa13.16□□□□□ -0.3
KCNMA1-280ENST00000640311 KDM3BQ7LBC6 1761 aa13.15□□□□□ -0.3
KCNMA1-280ENST00000640311 CHL1O00533 1208 aa13.15□□□□□ -0.3
KCNMA1-280ENST00000640311 MYL6BP14649 208 aa13.15□□□□□ -0.3
KCNMA1-280ENST00000640311 WWC3Q9ULE0 1092 aa13.15□□□□□ -0.3
KCNMA1-280ENST00000640311 NBPF26B4DH59 902 aa13.14□□□□□ -0.31
KCNMA1-280ENST00000640311 POLRMTO00411 1230 aaKnown RBP13.14□□□□□ -0.31
KCNMA1-280ENST00000640311 TM4SF1P30408 202 aa13.14□□□□□ -0.31
KCNMA1-280ENST00000640311 DDR1Q08345 913 aa13.14□□□□□ -0.31
KCNMA1-280ENST00000640311 NFIXQ14938 502 aa13.14□□□□□ -0.31
KCNMA1-280ENST00000640311 NBPF10Q6P3W6 841 aaKnown RBP13.14□□□□□ -0.31
KCNMA1-280ENST00000640311 NBPF15Q8N660 670 aa13.14□□□□□ -0.31
KCNMA1-280ENST00000640311 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
KCNMA1-280ENST00000640311 BCL2L12Q9HB09 334 aa13.14□□□□□ -0.31
KCNMA1-280ENST00000640311 NPHP1O15259 732 aa13.13□□□□□ -0.31
KCNMA1-280ENST00000640311 TBC1D9BQ66K14 1250 aa13.13□□□□□ -0.31
KCNMA1-280ENST00000640311 POTEHQ6S545 545 aa13.13□□□□□ -0.31
KCNMA1-280ENST00000640311 NECTIN2Q92692 538 aa13.13□□□□□ -0.31
KCNMA1-280ENST00000640311 SALL2Q9Y467 1007 aaPredicted RBP13.13□□□□□ -0.31
KCNMA1-280ENST00000640311 CAMTA2O94983 1202 aa13.12□□□□□ -0.31
KCNMA1-280ENST00000640311 SERPINB2P05120 415 aa13.12□□□□□ -0.31
KCNMA1-280ENST00000640311 TGFB2P61812 414 aa13.12□□□□□ -0.31
KCNMA1-280ENST00000640311 GNAI1P63096 354 aa13.12□□□□□ -0.31
KCNMA1-280ENST00000640311 KRT24Q2M2I5 525 aa13.12□□□□□ -0.31
KCNMA1-280ENST00000640311 SETDB2Q96T68 719 aa13.12□□□□□ -0.31
KCNMA1-280ENST00000640311 MBIPQ9NS73 344 aa13.12□□□□□ -0.31
KCNMA1-280ENST00000640311 ZNF652Q9Y2D9 606 aa13.12□□□□□ -0.31
KCNMA1-280ENST00000640311 A0A0G2JLW4 131 aa13.11□□□□□ -0.31
KCNMA1-280ENST00000640311 CAPN15O75808 1086 aa13.11□□□□□ -0.31
KCNMA1-280ENST00000640311 KIF6Q6ZMV9 814 aa13.11□□□□□ -0.31
KCNMA1-280ENST00000640311 IFT57Q9NWB7 429 aa13.11□□□□□ -0.31
KCNMA1-280ENST00000640311 CLEC4GQ6UXB4 293 aa13.1□□□□□ -0.31
KCNMA1-280ENST00000640311 WWC1Q8IX03 1113 aa13.1□□□□□ -0.31
KCNMA1-280ENST00000640311 C10orf71Q711Q0 1435 aa13.1□□□□□ -0.31
KCNMA1-280ENST00000640311 ERBB4Q15303 1308 aa13.1□□□□□ -0.31
KCNMA1-280ENST00000640311 LAMB4A4D0S4 1761 aa13.09□□□□□ -0.31
KCNMA1-280ENST00000640311 CARMIL3Q8ND23 1372 aa13.09□□□□□ -0.31
KCNMA1-280ENST00000640311 ELL2O00472 640 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms