RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 PTPRFP10586 1907 aa8.67□□□□□ -1.02
RTTN-215ENST00000639487 MTX1Q13505 466 aa8.66□□□□□ -1.02
RTTN-215ENST00000639487 PALLDQ8WX93 1383 aa8.66□□□□□ -1.02
RTTN-215ENST00000639487 RPAP1Q9BWH6 1393 aaPredicted RBP8.66□□□□□ -1.02
RTTN-215ENST00000639487 GNAT3A8MTJ3 354 aa8.66□□□□□ -1.02
RTTN-215ENST00000639487 MORC1Q86VD1 984 aa8.66□□□□□ -1.02
RTTN-215ENST00000639487 IL17RAQ96F46 866 aa8.66□□□□□ -1.02
RTTN-215ENST00000639487 RTFDC1Q9BY42 306 aaPredicted RBP8.66□□□□□ -1.02
RTTN-215ENST00000639487 MAF1Q9H063 256 aa8.66□□□□□ -1.02
RTTN-215ENST00000639487 ABCC4O15439 1325 aa8.65□□□□□ -1.02
RTTN-215ENST00000639487 KAT6BQ8WYB5 2073 aa8.65□□□□□ -1.02
RTTN-215ENST00000639487 TM4SF1P30408 202 aa8.65□□□□□ -1.03
RTTN-215ENST00000639487 BTG4Q9NY30 223 aa8.65□□□□□ -1.03
RTTN-215ENST00000639487 CRY2Q49AN0 593 aa8.64□□□□□ -1.03
RTTN-215ENST00000639487 QTRT2Q9H974 415 aaKnown RBP8.64□□□□□ -1.03
RTTN-215ENST00000639487 CASP8AP2Q9UKL3 1982 aa8.64□□□□□ -1.03
RTTN-215ENST00000639487 HOXA10P31260 410 aaPredicted RBP8.64□□□□□ -1.03
RTTN-215ENST00000639487 LARP1Q6PKG0 1096 aaKnown RBP8.63□□□□□ -1.03
RTTN-215ENST00000639487 RPS6KA4O75676 772 aa8.63□□□□□ -1.03
RTTN-215ENST00000639487 SEPT12Q8IYM1 358 aa8.63□□□□□ -1.03
RTTN-215ENST00000639487 CD2APQ9Y5K6 639 aa8.63□□□□□ -1.03
RTTN-215ENST00000639487 USP42Q9H9J4 1324 aaKnown RBP8.63□□□□□ -1.03
RTTN-215ENST00000639487 EIF5P55010 431 aaKnown RBP8.63□□□□□ -1.03
RTTN-215ENST00000639487 STK26Q9P289 416 aa8.63□□□□□ -1.03
RTTN-215ENST00000639487 ZNF512BQ96KM6 892 aaPredicted RBP8.62□□□□□ -1.03
RTTN-215ENST00000639487 PRDM11Q9NQV5 511 aa8.62□□□□□ -1.03
RTTN-215ENST00000639487 MYH15Q9Y2K3 1946 aa8.62□□□□□ -1.03
RTTN-215ENST00000639487 TMPOP42166 694 aaKnown RBP8.62□□□□□ -1.03
RTTN-215ENST00000639487 NEFLP07196 543 aa8.61□□□□□ -1.03
RTTN-215ENST00000639487 EIF4A1P60842 406 aaKnown RBP8.61□□□□□ -1.03
RTTN-215ENST00000639487 GNAI1P63096 354 aa8.61□□□□□ -1.03
RTTN-215ENST00000639487 MYH8P13535 1937 aa8.61□□□□□ -1.03
RTTN-215ENST00000639487 CYP19A1P11511 503 aaPredicted RBP8.61□□□□□ -1.03
RTTN-215ENST00000639487 MTHFSP49914 203 aa8.61□□□□□ -1.03
RTTN-215ENST00000639487 PDIA6Q15084 440 aa8.61□□□□□ -1.03
RTTN-215ENST00000639487 TGFB2P61812 414 aa8.61□□□□□ -1.03
RTTN-215ENST00000639487 E9PSI1 815 aa8.6□□□□□ -1.03
RTTN-215ENST00000639487 MGAMO43451 1857 aa8.6□□□□□ -1.03
RTTN-215ENST00000639487 SLFN5Q08AF3 891 aa8.6□□□□□ -1.03
RTTN-215ENST00000639487 DDB1Q16531 1140 aa8.6□□□□□ -1.03
RTTN-215ENST00000639487 STYK1Q6J9G0 422 aa8.6□□□□□ -1.03
RTTN-215ENST00000639487 INTS5Q6P9B9 1019 aaKnown RBP8.6□□□□□ -1.03
RTTN-215ENST00000639487 WWC1Q8IX03 1113 aa8.6□□□□□ -1.03
RTTN-215ENST00000639487 RGS22Q8NE09 1264 aa8.6□□□□□ -1.03
RTTN-215ENST00000639487 EPB41L2O43491 1005 aaKnown RBP8.6□□□□□ -1.03
RTTN-215ENST00000639487 HSP90B1P14625 803 aaKnown RBP8.6□□□□□ -1.03
RTTN-215ENST00000639487 TAF7Q15545 349 aaPredicted RBP8.6□□□□□ -1.03
RTTN-215ENST00000639487 ISCA1Q9BUE6 129 aa8.6□□□□□ -1.03
RTTN-215ENST00000639487 MRIQ9BWK5 157 aa8.6□□□□□ -1.03
RTTN-215ENST00000639487 EXOC5O00471 708 aa8.59□□□□□ -1.03
RTTN-215ENST00000639487 CNKSR2Q8WXI2 1034 aa8.59□□□□□ -1.03
RTTN-215ENST00000639487 ZNF34Q8IZ26 560 aa8.59□□□□□ -1.03
RTTN-215ENST00000639487 CASP7P55210 303 aa8.59□□□□□ -1.04
RTTN-215ENST00000639487 RABL6Q3YEC7 729 aaPredicted RBP8.59□□□□□ -1.04
RTTN-215ENST00000639487 CC2D2BQ6DHV5 1058 aa8.59□□□□□ -1.04
RTTN-215ENST00000639487 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.59□□□□□ -1.04
RTTN-215ENST00000639487 COL4A6Q14031 1691 aa8.58□□□□□ -1.04
RTTN-215ENST00000639487 ALDH1L1O75891 902 aa8.58□□□□□ -1.04
RTTN-215ENST00000639487 HSP90AB3PQ58FF7 597 aa8.58□□□□□ -1.04
RTTN-215ENST00000639487 PNPLA7Q6ZV29 1317 aa8.58□□□□□ -1.04
RTTN-215ENST00000639487 PARP10Q53GL7 1025 aa8.58□□□□□ -1.04
RTTN-215ENST00000639487 NPM2Q86SE8 214 aaKnown RBP8.58□□□□□ -1.04
RTTN-215ENST00000639487 EMILIN1Q9Y6C2 1016 aa8.58□□□□□ -1.04
RTTN-215ENST00000639487 TEX2Q8IWB9 1127 aa8.57□□□□□ -1.04
RTTN-215ENST00000639487 NARFQ9UHQ1 456 aa8.57□□□□□ -1.04
RTTN-215ENST00000639487 NPM3O75607 178 aaKnown RBP8.57□□□□□ -1.04
RTTN-215ENST00000639487 MTHFSDQ2M296 383 aaKnown RBP8.57□□□□□ -1.04
RTTN-215ENST00000639487 HSP90AB2PQ58FF8 381 aa8.57□□□□□ -1.04
RTTN-215ENST00000639487 IL17REQ8NFR9 667 aa8.57□□□□□ -1.04
RTTN-215ENST00000639487 KCNA4P22459 653 aa8.57□□□□□ -1.04
RTTN-215ENST00000639487 PMFBP1Q8TBY8 1022 aa8.57□□□□□ -1.04
RTTN-215ENST00000639487 GPR108Q9NPR9 543 aa8.57□□□□□ -1.04
RTTN-215ENST00000639487 AOX1Q06278 1338 aa8.56□□□□□ -1.04
RTTN-215ENST00000639487 PROM2Q8N271 834 aa8.56□□□□□ -1.04
RTTN-215ENST00000639487 SALL1Q9NSC2 1324 aa8.56□□□□□ -1.04
RTTN-215ENST00000639487 CCDC184Q52MB2 194 aa8.56□□□□□ -1.04
RTTN-215ENST00000639487 HYPKQ9NX55 129 aa8.56□□□□□ -1.04
RTTN-215ENST00000639487 RLFQ13129 1914 aa8.56□□□□□ -1.04
RTTN-215ENST00000639487 ZSWIM8A7E2V4 1837 aa8.55□□□□□ -1.04
RTTN-215ENST00000639487 GIGYF1O75420 1035 aaPredicted RBP8.55□□□□□ -1.04
RTTN-215ENST00000639487 PTGER2P43116 358 aa8.55□□□□□ -1.04
RTTN-215ENST00000639487 SOGA3Q5TF21 947 aa8.55□□□□□ -1.04
RTTN-215ENST00000639487 INTS3Q68E01 1043 aaKnown RBP8.55□□□□□ -1.04
RTTN-215ENST00000639487 NUTM2DQ5VT03 806 aaPredicted RBP8.55□□□□□ -1.04
RTTN-215ENST00000639487 LMOD2Q6P5Q4 547 aa8.55□□□□□ -1.04
RTTN-215ENST00000639487 SF3B3Q15393 1217 aaKnown RBP8.55□□□□□ -1.04
RTTN-215ENST00000639487 FMNL2Q96PY5 1086 aa8.55□□□□□ -1.04
RTTN-215ENST00000639487 DDX21Q9NR30 783 aaKnown RBP eCLIP8.55□□□□□ -1.04
RTTN-215ENST00000639487 ZNF790Q6PG37 636 aa8.54□□□□□ -1.04
RTTN-215ENST00000639487 RAPGEF4Q8WZA2 1011 aa8.54□□□□□ -1.04
RTTN-215ENST00000639487 CCDC136Q96JN2 1154 aa8.54□□□□□ -1.04
RTTN-215ENST00000639487 SNRKQ9NRH2 765 aa8.54□□□□□ -1.04
RTTN-215ENST00000639487 LOXHD1Q8IVV2 1947 aa8.54□□□□□ -1.04
RTTN-215ENST00000639487 BAG6P46379 1132 aa8.54□□□□□ -1.04
RTTN-215ENST00000639487 CRAMP1Q96RY5 1269 aa8.54□□□□□ -1.04
RTTN-215ENST00000639487 MTFR1LQ9H019 292 aa8.54□□□□□ -1.04
RTTN-215ENST00000639487 CSF1RP07333 972 aa8.53□□□□□ -1.04
RTTN-215ENST00000639487 SNRPA1P09661 255 aaKnown RBP8.53□□□□□ -1.04
RTTN-215ENST00000639487 MS4A1P11836 297 aa8.53□□□□□ -1.04
RTTN-215ENST00000639487 FAM43BQ6ZT52 329 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms