RNA–Protein interactions for RNA: ENST00000638988.1

SLC35A3-213, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5 BASIC

Gene SLC35A3, Length 1,286 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-213ENST00000638988 ZPR1O75312 459 aa28.45■■■□□ 2.14
SLC35A3-213ENST00000638988 MCM10Q7L590 875 aa28.45■■■□□ 2.14
SLC35A3-213ENST00000638988 PLEKHF1Q96S99 279 aa28.45■■■□□ 2.14
SLC35A3-213ENST00000638988 SRP68Q9UHB9 627 aaKnown RBP28.45■■■□□ 2.14
SLC35A3-213ENST00000638988 KIF13BQ9NQT8 1826 aa28.45■■■□□ 2.14
SLC35A3-213ENST00000638988 GOLGB1Q14789 3259 aaKnown RBP28.44■■■□□ 2.14
SLC35A3-213ENST00000638988 COL15A1P39059 1388 aa28.44■■■□□ 2.14
SLC35A3-213ENST00000638988 C1QTNF8P60827 252 aa28.43■■■□□ 2.14
SLC35A3-213ENST00000638988 TGFB2P61812 414 aa28.42■■■□□ 2.14
SLC35A3-213ENST00000638988 FKBP8Q14318 412 aa28.42■■■□□ 2.14
SLC35A3-213ENST00000638988 NARFQ9UHQ1 456 aa28.42■■■□□ 2.14
SLC35A3-213ENST00000638988 C10orf71Q711Q0 1435 aa28.42■■■□□ 2.14
SLC35A3-213ENST00000638988 MAPK8IP3Q9UPT6 1336 aa28.42■■■□□ 2.14
SLC35A3-213ENST00000638988 SENP3-EIF4A1A0A087X0R7 540 aa28.41■■■□□ 2.14
SLC35A3-213ENST00000638988 A0A087WZG4 1122 aa28.4■■■□□ 2.14
SLC35A3-213ENST00000638988 CANXP27824 592 aaKnown RBP28.4■■■□□ 2.14
SLC35A3-213ENST00000638988 DCTN1Q14203 1278 aa28.4■■■□□ 2.14
SLC35A3-213ENST00000638988 NFE2L2Q16236 605 aa28.4■■■□□ 2.14
SLC35A3-213ENST00000638988 USPL1Q5W0Q7 1092 aa28.4■■■□□ 2.14
SLC35A3-213ENST00000638988 DLG5Q8TDM6 1919 aa28.39■■■□□ 2.14
SLC35A3-213ENST00000638988 EIF5P55010 431 aaKnown RBP28.39■■■□□ 2.14
SLC35A3-213ENST00000638988 TAF7Q15545 349 aaPredicted RBP28.39■■■□□ 2.14
SLC35A3-213ENST00000638988 KCNQ3O43525 872 aa28.38■■■□□ 2.13
SLC35A3-213ENST00000638988 TM4SF1P30408 202 aa28.37■■■□□ 2.13
SLC35A3-213ENST00000638988 PXDNLA1KZ92 1463 aa28.36■■■□□ 2.13
SLC35A3-213ENST00000638988 IL6STP40189 918 aaPredicted RBP28.36■■■□□ 2.13
SLC35A3-213ENST00000638988 PNISRQ8TF01 805 aaKnown RBP28.36■■■□□ 2.13
SLC35A3-213ENST00000638988 WWC3Q9ULE0 1092 aa28.36■■■□□ 2.13
SLC35A3-213ENST00000638988 GIGYF1O75420 1035 aaPredicted RBP28.35■■■□□ 2.13
SLC35A3-213ENST00000638988 SNRPA1P09661 255 aaKnown RBP28.35■■■□□ 2.13
SLC35A3-213ENST00000638988 DDR1Q08345 913 aa28.35■■■□□ 2.13
SLC35A3-213ENST00000638988 NPM2Q86SE8 214 aaKnown RBP28.34■■■□□ 2.13
SLC35A3-213ENST00000638988 KIAA1551Q9HCM1 1747 aa28.34■■■□□ 2.13
SLC35A3-213ENST00000638988 POLRMTO00411 1230 aaKnown RBP28.33■■■□□ 2.13
SLC35A3-213ENST00000638988 A1BGP04217 495 aa28.31■■■□□ 2.12
SLC35A3-213ENST00000638988 PRKRIP1Q9H875 184 aaPredicted RBP28.31■■■□□ 2.12
SLC35A3-213ENST00000638988 BCL2L12Q9HB09 334 aa28.31■■■□□ 2.12
SLC35A3-213ENST00000638988 USP16Q9Y5T5 823 aa28.31■■■□□ 2.12
SLC35A3-213ENST00000638988 NFIXQ14938 502 aa28.3■■■□□ 2.12
SLC35A3-213ENST00000638988 N4BP2Q86UW6 1770 aaPredicted RBP28.29■■■□□ 2.12
SLC35A3-213ENST00000638988 A0A0G2JLW4 131 aa28.29■■■□□ 2.12
SLC35A3-213ENST00000638988 DPEP1P16444 411 aa28.27■■■□□ 2.12
SLC35A3-213ENST00000638988 WDR43Q15061 677 aaKnown RBP eCLIP28.27■■■□□ 2.12
SLC35A3-213ENST00000638988 ZNF330Q9Y3S2 320 aaPredicted RBP28.27■■■□□ 2.12
SLC35A3-213ENST00000638988 KDM3BQ7LBC6 1761 aa28.27■■■□□ 2.12
SLC35A3-213ENST00000638988 NRXN2Q9P2S2 1712 aa28.26■■■□□ 2.12
SLC35A3-213ENST00000638988 SCN7AQ01118 1682 aa28.26■■■□□ 2.12
SLC35A3-213ENST00000638988 LMOD3Q0VAK6 560 aa28.26■■■□□ 2.11
SLC35A3-213ENST00000638988 RIPK4P57078 832 aa28.25■■■□□ 2.11
SLC35A3-213ENST00000638988 AFDNP55196 1824 aaKnown RBP28.25■■■□□ 2.11
SLC35A3-213ENST00000638988 BRCA1P38398 1863 aaKnown RBP28.24■■■□□ 2.11
SLC35A3-213ENST00000638988 PRAMEF22A3QJZ6 481 aa28.24■■■□□ 2.11
SLC35A3-213ENST00000638988 SERPINB2P05120 415 aa28.24■■■□□ 2.11
SLC35A3-213ENST00000638988 TMPOP42166 694 aaKnown RBP28.24■■■□□ 2.11
SLC35A3-213ENST00000638988 MIS18AQ9NYP9 233 aa28.24■■■□□ 2.11
SLC35A3-213ENST00000638988 TBC1D2BQ9UPU7 963 aa28.24■■■□□ 2.11
SLC35A3-213ENST00000638988 THUMPD2Q9BTF0 503 aaKnown RBP28.23■■■□□ 2.11
SLC35A3-213ENST00000638988 BCS1LQ9Y276 419 aa28.23■■■□□ 2.11
SLC35A3-213ENST00000638988 KCNA3P22001 575 aa28.22■■■□□ 2.11
SLC35A3-213ENST00000638988 DZIP3Q86Y13 1208 aaKnown RBP28.22■■■□□ 2.11
SLC35A3-213ENST00000638988 PIM2Q9P1W9 311 aa28.22■■■□□ 2.11
SLC35A3-213ENST00000638988 LAMB4A4D0S4 1761 aa28.22■■■□□ 2.11
SLC35A3-213ENST00000638988 CAMTA2O94983 1202 aa28.21■■■□□ 2.11
SLC35A3-213ENST00000638988 EIF4A1P60842 406 aaKnown RBP28.21■■■□□ 2.11
SLC35A3-213ENST00000638988 ZNF526Q8TF50 670 aaPredicted RBP28.21■■■□□ 2.11
SLC35A3-213ENST00000638988 RUNDC1Q96C34 613 aa28.21■■■□□ 2.11
SLC35A3-213ENST00000638988 BABAM1Q9NWV8 329 aa28.21■■■□□ 2.11
SLC35A3-213ENST00000638988 RGL2O15211 777 aa28.2■■■□□ 2.1
SLC35A3-213ENST00000638988 TBC1D9BQ66K14 1250 aa28.2■■■□□ 2.1
SLC35A3-213ENST00000638988 BCORQ6W2J9 1755 aa28.19■■■□□ 2.1
SLC35A3-213ENST00000638988 ATP10DQ9P241 1426 aa28.19■■■□□ 2.1
SLC35A3-213ENST00000638988 CARMIL3Q8ND23 1372 aa28.19■■■□□ 2.1
SLC35A3-213ENST00000638988 CLEC4GQ6UXB4 293 aa28.18■■■□□ 2.1
SLC35A3-213ENST00000638988 BICDL1Q6ZP65 573 aa28.18■■■□□ 2.1
SLC35A3-213ENST00000638988 ARFGEF1Q9Y6D6 1849 aa28.18■■■□□ 2.1
SLC35A3-213ENST00000638988 NBPF26B4DH59 902 aa28.17■■■□□ 2.1
SLC35A3-213ENST00000638988 NBPF10Q6P3W6 841 aaKnown RBP28.17■■■□□ 2.1
SLC35A3-213ENST00000638988 CCDC146Q8IYE0 955 aa28.17■■■□□ 2.1
SLC35A3-213ENST00000638988 NBPF15Q8N660 670 aa28.17■■■□□ 2.1
SLC35A3-213ENST00000638988 ADAMTS8Q9UP79 889 aa28.17■■■□□ 2.1
SLC35A3-213ENST00000638988 ZNF652Q9Y2D9 606 aa28.17■■■□□ 2.1
SLC35A3-213ENST00000638988 PIP4K2AP48426 406 aaPredicted RBP28.16■■■□□ 2.1
SLC35A3-213ENST00000638988 DALRD3Q5D0E6 543 aaKnown RBP28.16■■■□□ 2.1
SLC35A3-213ENST00000638988 SETDB2Q96T68 719 aa28.16■■■□□ 2.1
SLC35A3-213ENST00000638988 GPBP1L1Q9HC44 474 aaPredicted RBP28.16■■■□□ 2.1
SLC35A3-213ENST00000638988 TSPYL4Q9UJ04 414 aa28.16■■■□□ 2.1
SLC35A3-213ENST00000638988 CHRNA5P30532 468 aa28.15■■■□□ 2.1
SLC35A3-213ENST00000638988 PDZRN3Q9UPQ7 1066 aa28.15■■■□□ 2.1
SLC35A3-213ENST00000638988 ADCY9O60503 1353 aa28.14■■■□□ 2.1
SLC35A3-213ENST00000638988 ZNF316A6NFI3 1004 aaPredicted RBP28.12■■■□□ 2.09
SLC35A3-213ENST00000638988 RRP7AQ9Y3A4 280 aaKnown RBP28.12■■■□□ 2.09
SLC35A3-213ENST00000638988 ERBB4Q15303 1308 aa28.12■■■□□ 2.09
SLC35A3-213ENST00000638988 NEUROD2Q15784 382 aa28.11■■■□□ 2.09
SLC35A3-213ENST00000638988 ARHGAP27Q6ZUM4 889 aa28.11■■■□□ 2.09
SLC35A3-213ENST00000638988 BRIP1Q9BX63 1249 aa28.11■■■□□ 2.09
SLC35A3-213ENST00000638988 DLEC1Q9Y238 1755 aa28.11■■■□□ 2.09
SLC35A3-213ENST00000638988 H0YIN7 160 aa28.1■■■□□ 2.09
SLC35A3-213ENST00000638988 PRR5LQ6MZQ0 368 aa28.1■■■□□ 2.09
SLC35A3-213ENST00000638988 PDE6BP35913 854 aa28.09■■■□□ 2.09
SLC35A3-213ENST00000638988 C2CD5Q86YS7 1000 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms