RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 BCL2L12Q9HB09 334 aa21.9■■□□□ 1.1
COLCA2-206ENST00000638573 COL15A1P39059 1388 aa21.89■■□□□ 1.1
COLCA2-206ENST00000638573 DPEP1P16444 411 aa21.89■■□□□ 1.09
COLCA2-206ENST00000638573 PIP4K2AP48426 406 aaPredicted RBP21.89■■□□□ 1.09
COLCA2-206ENST00000638573 PARP3Q9Y6F1 533 aa21.89■■□□□ 1.09
COLCA2-206ENST00000638573 HEG1Q9ULI3 1381 aa21.88■■□□□ 1.09
COLCA2-206ENST00000638573 GRIN3BO60391 1043 aa21.88■■□□□ 1.09
COLCA2-206ENST00000638573 SIPA1L3O60292 1781 aaPredicted RBP21.88■■□□□ 1.09
COLCA2-206ENST00000638573 CHD4Q14839 1912 aa21.88■■□□□ 1.09
COLCA2-206ENST00000638573 N4BP2Q86UW6 1770 aaPredicted RBP21.87■■□□□ 1.09
COLCA2-206ENST00000638573 POLRMTO00411 1230 aaKnown RBP21.87■■□□□ 1.09
COLCA2-206ENST00000638573 FCHSD2O94868 740 aa21.87■■□□□ 1.09
COLCA2-206ENST00000638573 BTBD11A6QL63 1104 aa21.86■■□□□ 1.09
COLCA2-206ENST00000638573 A1BGP04217 495 aa21.86■■□□□ 1.09
COLCA2-206ENST00000638573 VSIG10Q8N0Z9 540 aa21.86■■□□□ 1.09
COLCA2-206ENST00000638573 KCNA3P22001 575 aa21.85■■□□□ 1.09
COLCA2-206ENST00000638573 TM4SF1P30408 202 aa21.85■■□□□ 1.09
COLCA2-206ENST00000638573 NFIXQ14938 502 aa21.85■■□□□ 1.09
COLCA2-206ENST00000638573 THUMPD2Q9BTF0 503 aaKnown RBP21.85■■□□□ 1.09
COLCA2-206ENST00000638573 MIS18AQ9NYP9 233 aa21.85■■□□□ 1.09
COLCA2-206ENST00000638573 ZNF330Q9Y3S2 320 aaPredicted RBP21.85■■□□□ 1.09
COLCA2-206ENST00000638573 ZPR1O75312 459 aa21.84■■□□□ 1.09
COLCA2-206ENST00000638573 CHRNA5P30532 468 aa21.84■■□□□ 1.09
COLCA2-206ENST00000638573 BCS1LQ9Y276 419 aa21.84■■□□□ 1.09
COLCA2-206ENST00000638573 KIF13BQ9NQT8 1826 aa21.83■■□□□ 1.09
COLCA2-206ENST00000638573 PLEKHF1Q96S99 279 aa21.83■■□□□ 1.09
COLCA2-206ENST00000638573 NARFQ9UHQ1 456 aa21.83■■□□□ 1.09
COLCA2-206ENST00000638573 USP16Q9Y5T5 823 aa21.83■■□□□ 1.09
COLCA2-206ENST00000638573 EIF5P55010 431 aaKnown RBP21.82■■□□□ 1.08
COLCA2-206ENST00000638573 BICDL1Q6ZP65 573 aa21.82■■□□□ 1.08
COLCA2-206ENST00000638573 FMNL2Q96PY5 1086 aa21.82■■□□□ 1.08
COLCA2-206ENST00000638573 MYBBP1AQ9BQG0 1328 aaKnown RBP21.81■■□□□ 1.08
COLCA2-206ENST00000638573 ATP10DQ9P241 1426 aa21.81■■□□□ 1.08
COLCA2-206ENST00000638573 STARD3NLO95772 234 aa21.81■■□□□ 1.08
COLCA2-206ENST00000638573 TGFB2P61812 414 aa21.81■■□□□ 1.08
COLCA2-206ENST00000638573 ZNF526Q8TF50 670 aaPredicted RBP21.81■■□□□ 1.08
COLCA2-206ENST00000638573 RTF1Q92541 710 aaKnown RBP21.81■■□□□ 1.08
COLCA2-206ENST00000638573 TBC1D2BQ9UPU7 963 aa21.81■■□□□ 1.08
COLCA2-206ENST00000638573 CARMIL3Q8ND23 1372 aa21.8■■□□□ 1.08
COLCA2-206ENST00000638573 CCDC24Q8N4L8 307 aa21.8■■□□□ 1.08
COLCA2-206ENST00000638573 ADCY9O60503 1353 aa21.78■■□□□ 1.08
COLCA2-206ENST00000638573 TBC1D9BQ66K14 1250 aa21.78■■□□□ 1.08
COLCA2-206ENST00000638573 PRKRIP1Q9H875 184 aaPredicted RBP21.78■■□□□ 1.08
COLCA2-206ENST00000638573 SERPINB2P05120 415 aa21.76■■□□□ 1.07
COLCA2-206ENST00000638573 ANP32CO43423 234 aa21.75■■□□□ 1.07
COLCA2-206ENST00000638573 ARHGAP27Q6ZUM4 889 aa21.75■■□□□ 1.07
COLCA2-206ENST00000638573 NBPF26B4DH59 902 aa21.74■■□□□ 1.07
COLCA2-206ENST00000638573 CAMTA2O94983 1202 aa21.74■■□□□ 1.07
COLCA2-206ENST00000638573 NFE2L2Q16236 605 aa21.74■■□□□ 1.07
COLCA2-206ENST00000638573 NBPF10Q6P3W6 841 aaKnown RBP21.74■■□□□ 1.07
COLCA2-206ENST00000638573 NBPF15Q8N660 670 aa21.74■■□□□ 1.07
COLCA2-206ENST00000638573 HTATSF1O43719 755 aaKnown RBP21.73■■□□□ 1.07
COLCA2-206ENST00000638573 IL6STP40189 918 aaPredicted RBP21.73■■□□□ 1.07
COLCA2-206ENST00000638573 TAF7Q15545 349 aaPredicted RBP21.73■■□□□ 1.07
COLCA2-206ENST00000638573 TEX13AQ9BXU3 409 aaPredicted RBP21.73■■□□□ 1.07
COLCA2-206ENST00000638573 AFDNP55196 1824 aaKnown RBP21.72■■□□□ 1.07
COLCA2-206ENST00000638573 GIGYF1O75420 1035 aaPredicted RBP21.72■■□□□ 1.07
COLCA2-206ENST00000638573 C1QTNF8P60827 252 aa21.72■■□□□ 1.07
COLCA2-206ENST00000638573 CCDC146Q8IYE0 955 aa21.72■■□□□ 1.07
COLCA2-206ENST00000638573 SCN7AQ01118 1682 aa21.72■■□□□ 1.07
COLCA2-206ENST00000638573 SNRPA1P09661 255 aaKnown RBP21.71■■□□□ 1.07
COLCA2-206ENST00000638573 DZIP3Q86Y13 1208 aaKnown RBP21.71■■□□□ 1.07
COLCA2-206ENST00000638573 PIM2Q9P1W9 311 aa21.71■■□□□ 1.07
COLCA2-206ENST00000638573 RRP7AQ9Y3A4 280 aaKnown RBP21.71■■□□□ 1.07
COLCA2-206ENST00000638573 BRCA1P38398 1863 aaKnown RBP21.71■■□□□ 1.07
COLCA2-206ENST00000638573 NRXN2Q9P2S2 1712 aa21.7■■□□□ 1.06
COLCA2-206ENST00000638573 A0A087WZG4 1122 aa21.7■■□□□ 1.06
COLCA2-206ENST00000638573 DLG5Q8TDM6 1919 aa21.69■■□□□ 1.06
COLCA2-206ENST00000638573 DALRD3Q5D0E6 543 aaKnown RBP21.69■■□□□ 1.06
COLCA2-206ENST00000638573 MAPK8IP3Q9UPT6 1336 aa21.69■■□□□ 1.06
COLCA2-206ENST00000638573 PRR5LQ6MZQ0 368 aa21.68■■□□□ 1.06
COLCA2-206ENST00000638573 NEFMP07197 916 aa21.67■■□□□ 1.06
COLCA2-206ENST00000638573 EIF4A1P60842 406 aaKnown RBP21.67■■□□□ 1.06
COLCA2-206ENST00000638573 RASSF7Q02833 373 aa21.67■■□□□ 1.06
COLCA2-206ENST00000638573 C2CD5Q86YS7 1000 aa21.67■■□□□ 1.06
COLCA2-206ENST00000638573 GPBP1L1Q9HC44 474 aaPredicted RBP21.67■■□□□ 1.06
COLCA2-206ENST00000638573 NGEFQ8N5V2 710 aa21.66■■□□□ 1.06
COLCA2-206ENST00000638573 PRELPP51888 382 aa21.65■■□□□ 1.06
COLCA2-206ENST00000638573 RIPK4P57078 832 aa21.65■■□□□ 1.06
COLCA2-206ENST00000638573 C9orf131Q5VYM1 1079 aa21.65■■□□□ 1.06
COLCA2-206ENST00000638573 SENP3-EIF4A1A0A087X0R7 540 aa21.64■■□□□ 1.05
COLCA2-206ENST00000638573 TMPOP42166 694 aaKnown RBP21.64■■□□□ 1.05
COLCA2-206ENST00000638573 NEUROD2Q15784 382 aa21.64■■□□□ 1.05
COLCA2-206ENST00000638573 HLFQ16534 295 aa21.64■■□□□ 1.05
COLCA2-206ENST00000638573 KDM3BQ7LBC6 1761 aa21.64■■□□□ 1.05
COLCA2-206ENST00000638573 FAM177BA6PVY3 158 aa21.63■■□□□ 1.05
COLCA2-206ENST00000638573 WDR43Q15061 677 aaKnown RBP eCLIP21.63■■□□□ 1.05
COLCA2-206ENST00000638573 ZNF219Q9P2Y4 722 aaPredicted RBP21.63■■□□□ 1.05
COLCA2-206ENST00000638573 BCORQ6W2J9 1755 aa21.63■■□□□ 1.05
COLCA2-206ENST00000638573 ANKRD31Q8N7Z5 1873 aa21.62■■□□□ 1.05
COLCA2-206ENST00000638573 NPM2Q86SE8 214 aaKnown RBP21.62■■□□□ 1.05
COLCA2-206ENST00000638573 PNNQ9H307 717 aaKnown RBP21.62■■□□□ 1.05
COLCA2-206ENST00000638573 TTLL7Q6ZT98 887 aa21.61■■□□□ 1.05
COLCA2-206ENST00000638573 SETDB2Q96T68 719 aa21.61■■□□□ 1.05
COLCA2-206ENST00000638573 ADAMTS8Q9UP79 889 aa21.61■■□□□ 1.05
COLCA2-206ENST00000638573 COL11A2P13942 1736 aaPredicted RBP21.6■■□□□ 1.05
COLCA2-206ENST00000638573 KIF3CO14782 793 aa21.6■■□□□ 1.05
COLCA2-206ENST00000638573 MYL6BP14649 208 aa21.6■■□□□ 1.05
COLCA2-206ENST00000638573 KRT24Q2M2I5 525 aa21.6■■□□□ 1.05
COLCA2-206ENST00000638573 CNBD1Q8NA66 436 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms