RNA–Protein interactions for RNA: ENST00000638249.1

KCNMA1-229, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-229ENST00000638249 PLEKHF1Q96S99 279 aa19.72■□□□□ 0.75
KCNMA1-229ENST00000638249 WWC3Q9ULE0 1092 aa19.72■□□□□ 0.75
KCNMA1-229ENST00000638249 BRCA1P38398 1863 aaKnown RBP19.72■□□□□ 0.75
KCNMA1-229ENST00000638249 KDM3BQ7LBC6 1761 aa19.71■□□□□ 0.75
KCNMA1-229ENST00000638249 DDR1Q08345 913 aa19.7■□□□□ 0.74
KCNMA1-229ENST00000638249 RALBP1Q15311 655 aa19.7■□□□□ 0.74
KCNMA1-229ENST00000638249 AFDNP55196 1824 aaKnown RBP19.69■□□□□ 0.74
KCNMA1-229ENST00000638249 NRXN2Q9P2S2 1712 aa19.69■□□□□ 0.74
KCNMA1-229ENST00000638249 BTBD11A6QL63 1104 aa19.69■□□□□ 0.74
KCNMA1-229ENST00000638249 USPL1Q5W0Q7 1092 aa19.69■□□□□ 0.74
KCNMA1-229ENST00000638249 BCL2L12Q9HB09 334 aa19.69■□□□□ 0.74
KCNMA1-229ENST00000638249 PRAMEF22A3QJZ6 481 aa19.68■□□□□ 0.74
KCNMA1-229ENST00000638249 CANXP27824 592 aaKnown RBP19.68■□□□□ 0.74
KCNMA1-229ENST00000638249 LAMB4A4D0S4 1761 aa19.67■□□□□ 0.74
KCNMA1-229ENST00000638249 BCORQ6W2J9 1755 aa19.67■□□□□ 0.74
KCNMA1-229ENST00000638249 ZNF784Q8NCA9 323 aaPredicted RBP19.67■□□□□ 0.74
KCNMA1-229ENST00000638249 RTF1Q92541 710 aaKnown RBP19.67■□□□□ 0.74
KCNMA1-229ENST00000638249 FMNL2Q96PY5 1086 aa19.67■□□□□ 0.74
KCNMA1-229ENST00000638249 MYBBP1AQ9BQG0 1328 aaKnown RBP19.67■□□□□ 0.74
KCNMA1-229ENST00000638249 NARFQ9UHQ1 456 aa19.66■□□□□ 0.74
KCNMA1-229ENST00000638249 PARP3Q9Y6F1 533 aa19.66■□□□□ 0.74
KCNMA1-229ENST00000638249 POLRMTO00411 1230 aaKnown RBP19.65■□□□□ 0.74
KCNMA1-229ENST00000638249 HTATSF1O43719 755 aaKnown RBP19.65■□□□□ 0.74
KCNMA1-229ENST00000638249 TM4SF1P30408 202 aa19.65■□□□□ 0.74
KCNMA1-229ENST00000638249 EIF5P55010 431 aaKnown RBP19.65■□□□□ 0.74
KCNMA1-229ENST00000638249 THUMPD2Q9BTF0 503 aaKnown RBP19.65■□□□□ 0.74
KCNMA1-229ENST00000638249 STARD3NLO95772 234 aa19.64■□□□□ 0.73
KCNMA1-229ENST00000638249 A1BGP04217 495 aa19.64■□□□□ 0.73
KCNMA1-229ENST00000638249 NFE2L2Q16236 605 aa19.64■□□□□ 0.73
KCNMA1-229ENST00000638249 ZPR1O75312 459 aa19.63■□□□□ 0.73
KCNMA1-229ENST00000638249 PIP4K2AP48426 406 aaPredicted RBP19.63■□□□□ 0.73
KCNMA1-229ENST00000638249 MIS18AQ9NYP9 233 aa19.63■□□□□ 0.73
KCNMA1-229ENST00000638249 USP16Q9Y5T5 823 aa19.63■□□□□ 0.73
KCNMA1-229ENST00000638249 A0A0G2JLW4 131 aa19.62■□□□□ 0.73
KCNMA1-229ENST00000638249 GRIN3BO60391 1043 aa19.62■□□□□ 0.73
KCNMA1-229ENST00000638249 NFIXQ14938 502 aa19.62■□□□□ 0.73
KCNMA1-229ENST00000638249 DPEP1P16444 411 aa19.61■□□□□ 0.73
KCNMA1-229ENST00000638249 CARMIL3Q8ND23 1372 aa19.6■□□□□ 0.73
KCNMA1-229ENST00000638249 ARFGEF1Q9Y6D6 1849 aa19.6■□□□□ 0.73
KCNMA1-229ENST00000638249 KCNA3P22001 575 aa19.6■□□□□ 0.73
KCNMA1-229ENST00000638249 TGFB2P61812 414 aa19.6■□□□□ 0.73
KCNMA1-229ENST00000638249 TEX13AQ9BXU3 409 aaPredicted RBP19.6■□□□□ 0.73
KCNMA1-229ENST00000638249 ZNF330Q9Y3S2 320 aaPredicted RBP19.6■□□□□ 0.73
KCNMA1-229ENST00000638249 DLEC1Q9Y238 1755 aa19.6■□□□□ 0.73
KCNMA1-229ENST00000638249 ANKRD31Q8N7Z5 1873 aa19.6■□□□□ 0.73
KCNMA1-229ENST00000638249 MAPK8IP3Q9UPT6 1336 aa19.59■□□□□ 0.73
KCNMA1-229ENST00000638249 IL6STP40189 918 aaPredicted RBP19.59■□□□□ 0.73
KCNMA1-229ENST00000638249 TAF7Q15545 349 aaPredicted RBP19.59■□□□□ 0.73
KCNMA1-229ENST00000638249 PRKRIP1Q9H875 184 aaPredicted RBP19.59■□□□□ 0.73
KCNMA1-229ENST00000638249 ADCY9O60503 1353 aa19.59■□□□□ 0.73
KCNMA1-229ENST00000638249 NEFMP07197 916 aa19.58■□□□□ 0.73
KCNMA1-229ENST00000638249 TBC1D2BQ9UPU7 963 aa19.58■□□□□ 0.73
KCNMA1-229ENST00000638249 SNRPA1P09661 255 aaKnown RBP19.57■□□□□ 0.72
KCNMA1-229ENST00000638249 COL11A2P13942 1736 aaPredicted RBP19.57■□□□□ 0.72
KCNMA1-229ENST00000638249 NBPF26B4DH59 902 aa19.57■□□□□ 0.72
KCNMA1-229ENST00000638249 CHRNA5P30532 468 aa19.57■□□□□ 0.72
KCNMA1-229ENST00000638249 TBC1D9BQ66K14 1250 aa19.57■□□□□ 0.72
KCNMA1-229ENST00000638249 NBPF10Q6P3W6 841 aaKnown RBP19.57■□□□□ 0.72
KCNMA1-229ENST00000638249 CCDC146Q8IYE0 955 aa19.57■□□□□ 0.72
KCNMA1-229ENST00000638249 NBPF15Q8N660 670 aa19.57■□□□□ 0.72
KCNMA1-229ENST00000638249 A0A087WZG4 1122 aa19.56■□□□□ 0.72
KCNMA1-229ENST00000638249 CAMTA2O94983 1202 aa19.56■□□□□ 0.72
KCNMA1-229ENST00000638249 BICDL1Q6ZP65 573 aa19.56■□□□□ 0.72
KCNMA1-229ENST00000638249 BCS1LQ9Y276 419 aa19.56■□□□□ 0.72
KCNMA1-229ENST00000638249 SERPINB2P05120 415 aa19.55■□□□□ 0.72
KCNMA1-229ENST00000638249 ATP10DQ9P241 1426 aa19.55■□□□□ 0.72
KCNMA1-229ENST00000638249 RRP7AQ9Y3A4 280 aaKnown RBP19.55■□□□□ 0.72
KCNMA1-229ENST00000638249 TMPOP42166 694 aaKnown RBP19.54■□□□□ 0.72
KCNMA1-229ENST00000638249 PNNQ9H307 717 aaKnown RBP19.54■□□□□ 0.72
KCNMA1-229ENST00000638249 RIPK4P57078 832 aa19.53■□□□□ 0.72
KCNMA1-229ENST00000638249 EIF4A1P60842 406 aaKnown RBP19.53■□□□□ 0.72
KCNMA1-229ENST00000638249 DZIP3Q86Y13 1208 aaKnown RBP19.53■□□□□ 0.72
KCNMA1-229ENST00000638249 GIGYF1O75420 1035 aaPredicted RBP19.51■□□□□ 0.71
KCNMA1-229ENST00000638249 ZEB1P37275 1124 aaPredicted RBP19.51■□□□□ 0.71
KCNMA1-229ENST00000638249 PNISRQ8TF01 805 aaKnown RBP19.51■□□□□ 0.71
KCNMA1-229ENST00000638249 ADAMTS8Q9UP79 889 aa19.51■□□□□ 0.71
KCNMA1-229ENST00000638249 CCDC24Q8N4L8 307 aa19.5■□□□□ 0.71
KCNMA1-229ENST00000638249 PRR5LQ6MZQ0 368 aa19.49■□□□□ 0.71
KCNMA1-229ENST00000638249 PIM2Q9P1W9 311 aa19.49■□□□□ 0.71
KCNMA1-229ENST00000638249 WDR43Q15061 677 aaKnown RBP eCLIP19.48■□□□□ 0.71
KCNMA1-229ENST00000638249 NEUROD2Q15784 382 aa19.48■□□□□ 0.71
KCNMA1-229ENST00000638249 RUNDC1Q96C34 613 aa19.48■□□□□ 0.71
KCNMA1-229ENST00000638249 TRIM35Q9UPQ4 493 aa19.48■□□□□ 0.71
KCNMA1-229ENST00000638249 CCDC184Q52MB2 194 aa19.47■□□□□ 0.71
KCNMA1-229ENST00000638249 TSPYL4Q9UJ04 414 aa19.47■□□□□ 0.71
KCNMA1-229ENST00000638249 CACNA1SQ13698 1873 aa19.46■□□□□ 0.71
KCNMA1-229ENST00000638249 DALRD3Q5D0E6 543 aaKnown RBP19.46■□□□□ 0.71
KCNMA1-229ENST00000638249 NUP98P52948 1817 aa19.46■□□□□ 0.71
KCNMA1-229ENST00000638249 ARHGAP27Q6ZUM4 889 aa19.45■□□□□ 0.7
KCNMA1-229ENST00000638249 TNRC6CQ9HCJ0 1690 aaKnown RBP19.45■□□□□ 0.7
KCNMA1-229ENST00000638249 SBF1O95248 1867 aa19.45■□□□□ 0.7
KCNMA1-229ENST00000638249 HLFQ16534 295 aa19.44■□□□□ 0.7
KCNMA1-229ENST00000638249 NPM2Q86SE8 214 aaKnown RBP19.44■□□□□ 0.7
KCNMA1-229ENST00000638249 ARFGEF2Q9Y6D5 1785 aa19.44■□□□□ 0.7
KCNMA1-229ENST00000638249 LMOD3Q0VAK6 560 aa19.44■□□□□ 0.7
KCNMA1-229ENST00000638249 TTLL7Q6ZT98 887 aa19.44■□□□□ 0.7
KCNMA1-229ENST00000638249 C2CD5Q86YS7 1000 aa19.44■□□□□ 0.7
KCNMA1-229ENST00000638249 ZNF526Q8TF50 670 aaPredicted RBP19.44■□□□□ 0.7
KCNMA1-229ENST00000638249 SETDB2Q96T68 719 aa19.44■□□□□ 0.7
KCNMA1-229ENST00000638249 KRT24Q2M2I5 525 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms