RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 ZSCAN25Q6NSZ9 544 aa19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 GCC1Q96CN9 775 aa19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 CEP126Q9P2H0 1117 aa19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 KAT6BQ8WYB5 2073 aa19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 SP4Q02446 784 aa19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 BMS1Q14692 1282 aaKnown RBP19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 RPGRQ92834 1020 aaKnown RBP19.73■□□□□ 0.75
CACNA1A-253ENST00000637927 ZNF397Q8NF99 534 aaPredicted RBP19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 SCAPERQ9BY12 1400 aa19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 LUZP1Q86V48 1076 aa19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 SYNCQ9H7C4 482 aa19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 PRKCSHP14314 528 aaPredicted RBP19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 PDCP20941 246 aa19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 NLRP5P59047 1200 aa19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 ZBTB21Q9ULJ3 1066 aa19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 LRSAM1Q6UWE0 723 aa19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 ANKLE2Q86XL3 938 aa19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 PPM1EQ8WY54 764 aa19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 TMOD3Q9NYL9 352 aa19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 FERP16591 822 aa19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 CASQ1P31415 396 aa19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 HSP90AA4PQ58FG1 418 aa19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 PPP1R14CQ8TAE6 165 aa19.72■□□□□ 0.75
CACNA1A-253ENST00000637927 CCDC192P0DO97 292 aa19.71■□□□□ 0.75
CACNA1A-253ENST00000637927 CCDC83Q8IWF9 413 aa19.71■□□□□ 0.75
CACNA1A-253ENST00000637927 PPP2R5CQ13362 524 aa19.71■□□□□ 0.75
CACNA1A-253ENST00000637927 RNF216Q9NWF9 866 aaPredicted RBP19.71■□□□□ 0.75
CACNA1A-253ENST00000637927 DACH1Q9UI36 760 aa19.71■□□□□ 0.75
CACNA1A-253ENST00000637927 ERBINQ96RT1 1412 aa19.71■□□□□ 0.75
CACNA1A-253ENST00000637927 NOP9Q86U38 636 aaKnown RBP19.71■□□□□ 0.75
CACNA1A-253ENST00000637927 K7ELQ4 463 aaPredicted RBP19.71■□□□□ 0.75
CACNA1A-253ENST00000637927 NOP2P46087 812 aaKnown RBP19.71■□□□□ 0.75
CACNA1A-253ENST00000637927 JMYQ8N9B5 988 aa19.7■□□□□ 0.74
CACNA1A-253ENST00000637927 CUL5Q93034 780 aa19.7■□□□□ 0.74
CACNA1A-253ENST00000637927 ZNF408Q9H9D4 720 aa19.7■□□□□ 0.74
CACNA1A-253ENST00000637927 GNAT3A8MTJ3 354 aa19.7■□□□□ 0.74
CACNA1A-253ENST00000637927 HLTFQ14527 1009 aaKnown RBP eCLIP19.7■□□□□ 0.74
CACNA1A-253ENST00000637927 NCOA2Q15596 1464 aa19.7■□□□□ 0.74
CACNA1A-253ENST00000637927 FANCIQ9NVI1 1328 aa19.7■□□□□ 0.74
CACNA1A-253ENST00000637927 MXRA7P84157 204 aa19.7■□□□□ 0.74
CACNA1A-253ENST00000637927 SPA17Q15506 151 aa19.7■□□□□ 0.74
CACNA1A-253ENST00000637927 CCT2P78371 535 aaKnown RBP19.69■□□□□ 0.74
CACNA1A-253ENST00000637927 ANKRD1Q15327 319 aa19.69■□□□□ 0.74
CACNA1A-253ENST00000637927 CCDC8Q9H0W5 538 aaPredicted RBP19.69■□□□□ 0.74
CACNA1A-253ENST00000637927 ZSWIM4Q9H7M6 989 aa19.69■□□□□ 0.74
CACNA1A-253ENST00000637927 ARHGAP29Q52LW3 1261 aa19.69■□□□□ 0.74
CACNA1A-253ENST00000637927 CCDC148Q8NFR7 591 aa19.69■□□□□ 0.74
CACNA1A-253ENST00000637927 CCDC66A2RUB6 948 aa19.69■□□□□ 0.74
CACNA1A-253ENST00000637927 MYO1BO43795 1136 aa19.69■□□□□ 0.74
CACNA1A-253ENST00000637927 CCDC63Q8NA47 563 aa19.69■□□□□ 0.74
CACNA1A-253ENST00000637927 RAB3IL1Q8TBN0 382 aa19.69■□□□□ 0.74
CACNA1A-253ENST00000637927 NUP88Q99567 741 aaPredicted RBP19.69■□□□□ 0.74
CACNA1A-253ENST00000637927 TTC36A6NLP5 189 aa19.69■□□□□ 0.74
CACNA1A-253ENST00000637927 STARD3NLO95772 234 aa19.69■□□□□ 0.74
CACNA1A-253ENST00000637927 UPF3BQ9BZI7 483 aaKnown RBP19.69■□□□□ 0.74
CACNA1A-253ENST00000637927 IMMTQ16891 758 aaKnown RBP19.68■□□□□ 0.74
CACNA1A-253ENST00000637927 KRT85P78386 507 aa19.68■□□□□ 0.74
CACNA1A-253ENST00000637927 ZNF444Q8N0Y2 327 aaPredicted RBP19.68■□□□□ 0.74
CACNA1A-253ENST00000637927 BIN1O00499 593 aa19.68■□□□□ 0.74
CACNA1A-253ENST00000637927 PPP1R12BO60237 982 aaPredicted RBP19.68■□□□□ 0.74
CACNA1A-253ENST00000637927 IL27Q8NEV9 243 aa19.68■□□□□ 0.74
CACNA1A-253ENST00000637927 F6X3S4 739 aa19.68■□□□□ 0.74
CACNA1A-253ENST00000637927 BRD4O60885 1362 aaPredicted RBP19.67■□□□□ 0.74
CACNA1A-253ENST00000637927 TMEM57Q8N5G2 664 aa19.67■□□□□ 0.74
CACNA1A-253ENST00000637927 CCP110O43303 1012 aa19.67■□□□□ 0.74
CACNA1A-253ENST00000637927 SPECC1Q5M775 1068 aa19.67■□□□□ 0.74
CACNA1A-253ENST00000637927 PRG4Q92954 1404 aaPredicted RBP19.67■□□□□ 0.74
CACNA1A-253ENST00000637927 TSG101Q99816 390 aa19.67■□□□□ 0.74
CACNA1A-253ENST00000637927 SMIM23A6NLE4 172 aa19.67■□□□□ 0.74
CACNA1A-253ENST00000637927 PIP4K2AP48426 406 aaPredicted RBP19.67■□□□□ 0.74
CACNA1A-253ENST00000637927 TAF12Q16514 161 aa19.67■□□□□ 0.74
CACNA1A-253ENST00000637927 PRPF40BQ6NWY9 871 aaKnown RBP19.67■□□□□ 0.74
CACNA1A-253ENST00000637927 CAVIN4Q5BKX8 364 aa19.66■□□□□ 0.74
CACNA1A-253ENST00000637927 CFTRP13569 1480 aa19.66■□□□□ 0.74
CACNA1A-253ENST00000637927 CETN2P41208 172 aa19.66■□□□□ 0.74
CACNA1A-253ENST00000637927 TSNARE1Q96NA8 513 aa19.66■□□□□ 0.74
CACNA1A-253ENST00000637927 ATF7IPQ6VMQ6 1270 aa19.65■□□□□ 0.74
CACNA1A-253ENST00000637927 MRVI1Q9Y6F6 885 aa19.65■□□□□ 0.74
CACNA1A-253ENST00000637927 NDC80O14777 642 aa19.65■□□□□ 0.74
CACNA1A-253ENST00000637927 IRX5P78411 483 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-253ENST00000637927 MBD3O95983 291 aa19.65■□□□□ 0.74
CACNA1A-253ENST00000637927 MVPQ14764 893 aaKnown RBP19.65■□□□□ 0.74
CACNA1A-253ENST00000637927 PPP4R4Q6NUP7 873 aa19.65■□□□□ 0.74
CACNA1A-253ENST00000637927 CLSTN2Q9H4D0 955 aa19.65■□□□□ 0.74
CACNA1A-253ENST00000637927 PNISRQ8TF01 805 aaKnown RBP19.65■□□□□ 0.74
CACNA1A-253ENST00000637927 PICALMQ13492 652 aa19.65■□□□□ 0.74
CACNA1A-253ENST00000637927 MAATS1Q7Z4T9 603 aa19.64■□□□□ 0.74
CACNA1A-253ENST00000637927 DUSP27Q5VZP5 1158 aa19.64■□□□□ 0.73
CACNA1A-253ENST00000637927 WDR33Q9C0J8 1336 aaKnown RBP19.64■□□□□ 0.73
CACNA1A-253ENST00000637927 DNAI2Q9GZS0 605 aa19.64■□□□□ 0.73
CACNA1A-253ENST00000637927 LRRC9Q6ZRR7 1453 aa19.64■□□□□ 0.73
CACNA1A-253ENST00000637927 MCM2P49736 904 aa19.64■□□□□ 0.73
CACNA1A-253ENST00000637927 CCDC184Q52MB2 194 aa19.63■□□□□ 0.73
CACNA1A-253ENST00000637927 CDKL5O76039 1030 aa19.63■□□□□ 0.73
CACNA1A-253ENST00000637927 KCNA4P22459 653 aa19.63■□□□□ 0.73
CACNA1A-253ENST00000637927 NUDT16Q96DE0 195 aaKnown RBP19.63■□□□□ 0.73
CACNA1A-253ENST00000637927 CRACR2AQ9BSW2 395 aa19.63■□□□□ 0.73
CACNA1A-253ENST00000637927 ACSBG1Q96GR2 724 aa19.63■□□□□ 0.73
CACNA1A-253ENST00000637927 NUP62CLQ9H1M0 184 aa19.63■□□□□ 0.73
CACNA1A-253ENST00000637927 ERLIN1O75477 346 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms