RNA–Protein interactions for RNA: ENST00000637789.1

CHD2-229, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-229ENST00000637789 KDRP35968 1356 aa14.14□□□□□ -0.15
CHD2-229ENST00000637789 DDX21Q9NR30 783 aaKnown RBP eCLIP14.14□□□□□ -0.15
CHD2-229ENST00000637789 MAP3K19Q56UN5 1328 aa14.14□□□□□ -0.15
CHD2-229ENST00000637789 COL5A3P25940 1745 aaPredicted RBP14.13□□□□□ -0.15
CHD2-229ENST00000637789 SLC4A9Q96Q91 983 aa14.13□□□□□ -0.15
CHD2-229ENST00000637789 TMOD3Q9NYL9 352 aa14.13□□□□□ -0.15
CHD2-229ENST00000637789 SMG6Q86US8 1419 aaKnown RBP14.13□□□□□ -0.15
CHD2-229ENST00000637789 CNTNAP4Q9C0A0 1308 aa14.13□□□□□ -0.15
CHD2-229ENST00000637789 FER1L6Q2WGJ9 1857 aa14.12□□□□□ -0.15
CHD2-229ENST00000637789 TM4SF1P30408 202 aa14.12□□□□□ -0.15
CHD2-229ENST00000637789 AMPHP49418 695 aa14.12□□□□□ -0.15
CHD2-229ENST00000637789 FMR1Q06787 632 aaKnown RBP eCLIP14.12□□□□□ -0.15
CHD2-229ENST00000637789 ATG3Q9NT62 314 aa14.12□□□□□ -0.15
CHD2-229ENST00000637789 USP42Q9H9J4 1324 aaKnown RBP14.12□□□□□ -0.15
CHD2-229ENST00000637789 EPHX2P34913 555 aa14.11□□□□□ -0.15
CHD2-229ENST00000637789 NKX1-1Q15270 411 aaPredicted RBP14.11□□□□□ -0.15
CHD2-229ENST00000637789 HACL1Q9UJ83 578 aa14.11□□□□□ -0.15
CHD2-229ENST00000637789 ADAMTS7Q9UKP4 1686 aa14.1□□□□□ -0.15
CHD2-229ENST00000637789 FBLN1P23142 703 aa14.1□□□□□ -0.15
CHD2-229ENST00000637789 BRPF1P55201 1214 aaPredicted RBP14.1□□□□□ -0.15
CHD2-229ENST00000637789 C2CD5Q86YS7 1000 aa14.1□□□□□ -0.15
CHD2-229ENST00000637789 MYH14Q7Z406 1995 aaKnown RBP14.09□□□□□ -0.15
CHD2-229ENST00000637789 AFDNP55196 1824 aaKnown RBP14.09□□□□□ -0.15
CHD2-229ENST00000637789 C21orf2O43822 256 aa14.09□□□□□ -0.15
CHD2-229ENST00000637789 PNMA8AQ86V59 439 aaPredicted RBP14.09□□□□□ -0.15
CHD2-229ENST00000637789 TLL2Q9Y6L7 1015 aa14.09□□□□□ -0.15
CHD2-229ENST00000637789 ZNF831Q5JPB2 1677 aa14.09□□□□□ -0.15
CHD2-229ENST00000637789 LTBP3Q9NS15 1303 aa14.09□□□□□ -0.15
CHD2-229ENST00000637789 RBM42Q9BTD8 480 aaKnown RBP14.08□□□□□ -0.16
CHD2-229ENST00000637789 TAOK3Q9H2K8 898 aa14.08□□□□□ -0.16
CHD2-229ENST00000637789 H0YIN7 160 aa14.07□□□□□ -0.16
CHD2-229ENST00000637789 CST9Q5W186 159 aa14.07□□□□□ -0.16
CHD2-229ENST00000637789 CIAPIN1Q6FI81 312 aa14.07□□□□□ -0.16
CHD2-229ENST00000637789 SLC17A8Q8NDX2 589 aa14.07□□□□□ -0.16
CHD2-229ENST00000637789 NRXN2Q9P2S2 1712 aa14.07□□□□□ -0.16
CHD2-229ENST00000637789 ZNF541Q9H0D2 1346 aa14.06□□□□□ -0.16
CHD2-229ENST00000637789 EDC4Q6P2E9 1401 aaKnown RBP14.06□□□□□ -0.16
CHD2-229ENST00000637789 RNF123Q5XPI4 1314 aa14.05□□□□□ -0.16
CHD2-229ENST00000637789 CARMIL3Q8ND23 1372 aa14.05□□□□□ -0.16
CHD2-229ENST00000637789 SZT2Q5T011 3432 aa14.04□□□□□ -0.16
CHD2-229ENST00000637789 TRAF5O00463 557 aa14.03□□□□□ -0.16
CHD2-229ENST00000637789 NFIXQ14938 502 aa14.03□□□□□ -0.16
CHD2-229ENST00000637789 ZNF622Q969S3 477 aaKnown RBP eCLIP14.03□□□□□ -0.161e-9■■□□□ 14.1
CHD2-229ENST00000637789 RTL1A6NKG5 1358 aa14.03□□□□□ -0.16
CHD2-229ENST00000637789 TRPM7Q96QT4 1865 aa14.03□□□□□ -0.16
CHD2-229ENST00000637789 CRKLP46109 303 aaKnown RBP14.02□□□□□ -0.17
CHD2-229ENST00000637789 USPL1Q5W0Q7 1092 aa14.02□□□□□ -0.17
CHD2-229ENST00000637789 HDGFL2Q7Z4V5 671 aaPredicted RBP14.02□□□□□ -0.17
CHD2-229ENST00000637789 SAPCD2Q86UD0 394 aa14.02□□□□□ -0.17
CHD2-229ENST00000637789 HPS5Q9UPZ3 1129 aa14.02□□□□□ -0.17
CHD2-229ENST00000637789 SERPINB2P05120 415 aa14.01□□□□□ -0.17
CHD2-229ENST00000637789 ZIC5Q96T25 663 aa14.01□□□□□ -0.17
CHD2-229ENST00000637789 INSRP06213 1382 aa14□□□□□ -0.17
CHD2-229ENST00000637789 RRS1Q15050 365 aaKnown RBP14□□□□□ -0.17
CHD2-229ENST00000637789 CTU1Q7Z7A3 348 aaKnown RBP14□□□□□ -0.17
CHD2-229ENST00000637789 SPG7Q9UQ90 795 aa14□□□□□ -0.17
CHD2-229ENST00000637789 PITPNM2Q9BZ72 1349 aa13.99□□□□□ -0.17
CHD2-229ENST00000637789 ZPR1O75312 459 aa13.99□□□□□ -0.17
CHD2-229ENST00000637789 TMC1Q8TDI8 760 aa13.99□□□□□ -0.17
CHD2-229ENST00000637789 COG3Q96JB2 828 aa13.99□□□□□ -0.17
CHD2-229ENST00000637789 A0A0C4DFX4 3053 aa13.99□□□□□ -0.17
CHD2-229ENST00000637789 CUL9Q8IWT3 2517 aa13.99□□□□□ -0.17
CHD2-229ENST00000637789 COL11A2P13942 1736 aaPredicted RBP13.98□□□□□ -0.17
CHD2-229ENST00000637789 A0A1W2PP64 1363 aa13.98□□□□□ -0.17
CHD2-229ENST00000637789 HHIPL1Q96JK4 782 aa13.98□□□□□ -0.17
CHD2-229ENST00000637789 PHKG2P15735 406 aa13.97□□□□□ -0.17
CHD2-229ENST00000637789 SLC12A5Q9H2X9 1139 aa13.97□□□□□ -0.17
CHD2-229ENST00000637789 ANKRD31Q8N7Z5 1873 aa13.97□□□□□ -0.17
CHD2-229ENST00000637789 HSP90AB2PQ58FF8 381 aa13.96□□□□□ -0.17
CHD2-229ENST00000637789 BICDL1Q6ZP65 573 aa13.96□□□□□ -0.17
CHD2-229ENST00000637789 SAGE1Q9NXZ1 904 aa13.96□□□□□ -0.17
CHD2-229ENST00000637789 SLX4Q8IY92 1834 aa13.96□□□□□ -0.17
CHD2-229ENST00000637789 MKI67P46013 3256 aaKnown RBP13.96□□□□□ -0.18
CHD2-229ENST00000637789 CELF2O95319 508 aaKnown RBP13.95□□□□□ -0.18
CHD2-229ENST00000637789 NOGQ13253 232 aa13.95□□□□□ -0.18
CHD2-229ENST00000637789 INTS5Q6P9B9 1019 aaKnown RBP13.95□□□□□ -0.18
CHD2-229ENST00000637789 IFNL2Q8IZJ0 200 aa13.95□□□□□ -0.18
CHD2-229ENST00000637789 COLQQ9Y215 455 aaPredicted RBP13.95□□□□□ -0.18
CHD2-229ENST00000637789 PTCD1O75127 700 aaKnown RBP13.94□□□□□ -0.18
CHD2-229ENST00000637789 CACNA1SQ13698 1873 aa13.94□□□□□ -0.18
CHD2-229ENST00000637789 GPC2Q8N158 579 aa13.94□□□□□ -0.18
CHD2-229ENST00000637789 BCL2L12Q9HB09 334 aa13.94□□□□□ -0.18
CHD2-229ENST00000637789 TERF2IPQ9NYB0 399 aa13.94□□□□□ -0.18
CHD2-229ENST00000637789 TJP1Q07157 1748 aa13.93□□□□□ -0.18
CHD2-229ENST00000637789 PDE6BP35913 854 aa13.93□□□□□ -0.18
CHD2-229ENST00000637789 AKAP4Q5JQC9 854 aa13.93□□□□□ -0.18
CHD2-229ENST00000637789 SOGA3Q5TF21 947 aa13.93□□□□□ -0.18
CHD2-229ENST00000637789 PRPF40BQ6NWY9 871 aaKnown RBP13.93□□□□□ -0.18
CHD2-229ENST00000637789 ZNF277Q9NRM2 450 aaPredicted RBP13.93□□□□□ -0.18
CHD2-229ENST00000637789 PDZRN3Q9UPQ7 1066 aa13.93□□□□□ -0.18
CHD2-229ENST00000637789 SCN11AQ9UI33 1791 aa13.92□□□□□ -0.18
CHD2-229ENST00000637789 FZD9O00144 591 aa13.92□□□□□ -0.18
CHD2-229ENST00000637789 TRPA1O75762 1119 aa13.92□□□□□ -0.18
CHD2-229ENST00000637789 CCDC24Q8N4L8 307 aa13.92□□□□□ -0.18
CHD2-229ENST00000637789 RNF186Q9NXI6 227 aa13.92□□□□□ -0.18
CHD2-229ENST00000637789 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.92□□□□□ -0.182e-10■■■□□ 18.2
CHD2-229ENST00000637789 NARFQ9UHQ1 456 aa13.92□□□□□ -0.18
CHD2-229ENST00000637789 NCAPD2Q15021 1401 aa13.91□□□□□ -0.18
CHD2-229ENST00000637789 CNKSR1Q969H4 720 aa13.91□□□□□ -0.18
CHD2-229ENST00000637789 BRIP1Q9BX63 1249 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms