RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 SLC39A6Q13433 755 aa19.58■□□□□ 0.73
CTSD-211ENST00000637387 ZNF790Q6PG37 636 aa19.58■□□□□ 0.73
CTSD-211ENST00000637387 CLUAP1Q96AJ1 413 aa19.57■□□□□ 0.72
CTSD-211ENST00000637387 CABP4P57796 275 aa19.57■□□□□ 0.72
CTSD-211ENST00000637387 DZIP1LQ8IYY4 767 aaKnown RBP19.56■□□□□ 0.72
CTSD-211ENST00000637387 PROM2Q8N271 834 aa19.56■□□□□ 0.72
CTSD-211ENST00000637387 ARHGAP45Q92619 1136 aa19.56■□□□□ 0.72
CTSD-211ENST00000637387 COG6Q9Y2V7 657 aa19.56■□□□□ 0.72
CTSD-211ENST00000637387 ABCC4O15439 1325 aa19.55■□□□□ 0.72
CTSD-211ENST00000637387 PRAMEF22A3QJZ6 481 aa19.55■□□□□ 0.72
CTSD-211ENST00000637387 GIGYF1O75420 1035 aaPredicted RBP19.55■□□□□ 0.72
CTSD-211ENST00000637387 NBPF14Q5TI25 921 aa19.55■□□□□ 0.72
CTSD-211ENST00000637387 KAT6BQ8WYB5 2073 aa19.54■□□□□ 0.72
CTSD-211ENST00000637387 TJP1Q07157 1748 aa19.54■□□□□ 0.72
CTSD-211ENST00000637387 B4GALNT3Q6L9W6 998 aa19.54■□□□□ 0.72
CTSD-211ENST00000637387 CICQ96RK0 1608 aaPredicted RBP19.54■□□□□ 0.72
CTSD-211ENST00000637387 KCNQ2O43526 872 aa19.53■□□□□ 0.72
CTSD-211ENST00000637387 HDGFL1Q5TGJ6 251 aa19.53■□□□□ 0.72
CTSD-211ENST00000637387 G2E3Q7L622 706 aa19.53■□□□□ 0.72
CTSD-211ENST00000637387 ZNF496Q96IT1 587 aaPredicted RBP19.53■□□□□ 0.72
CTSD-211ENST00000637387 NHSQ6T4R5 1651 aa19.53■□□□□ 0.72
CTSD-211ENST00000637387 IPO8O15397 1037 aaKnown RBP19.53■□□□□ 0.72
CTSD-211ENST00000637387 MVPQ14764 893 aaKnown RBP19.53■□□□□ 0.72
CTSD-211ENST00000637387 CCDC30Q5VVM6 783 aa19.53■□□□□ 0.72
CTSD-211ENST00000637387 SLC4A2P04920 1241 aa19.52■□□□□ 0.71
CTSD-211ENST00000637387 TMEM57Q8N5G2 664 aa19.52■□□□□ 0.71
CTSD-211ENST00000637387 NECTIN2Q92692 538 aa19.52■□□□□ 0.71
CTSD-211ENST00000637387 FTSJ3Q8IY81 847 aaKnown RBP19.51■□□□□ 0.71
CTSD-211ENST00000637387 PTPRCP08575 1304 aa19.51■□□□□ 0.71
CTSD-211ENST00000637387 MS4A1P11836 297 aa19.5■□□□□ 0.71
CTSD-211ENST00000637387 ACSBG1Q96GR2 724 aa19.5■□□□□ 0.71
CTSD-211ENST00000637387 TXNRD1Q16881 649 aa19.49■□□□□ 0.71
CTSD-211ENST00000637387 STK31Q9BXU1 1019 aa19.49■□□□□ 0.71
CTSD-211ENST00000637387 ANO8Q9HCE9 1232 aaPredicted RBP19.49■□□□□ 0.71
CTSD-211ENST00000637387 PXDNLA1KZ92 1463 aa19.49■□□□□ 0.71
CTSD-211ENST00000637387 TTC5Q8N0Z6 440 aa19.49■□□□□ 0.71
CTSD-211ENST00000637387 API5Q9BZZ5 524 aaKnown RBP19.49■□□□□ 0.71
CTSD-211ENST00000637387 TMOD3Q9NYL9 352 aa19.49■□□□□ 0.71
CTSD-211ENST00000637387 CHPF2Q9P2E5 772 aa19.49■□□□□ 0.71
CTSD-211ENST00000637387 ARFGEF2Q9Y6D5 1785 aa19.48■□□□□ 0.71
CTSD-211ENST00000637387 EIF2S2P20042 333 aaKnown RBP19.48■□□□□ 0.71
CTSD-211ENST00000637387 PIGBQ92521 554 aa19.48■□□□□ 0.71
CTSD-211ENST00000637387 FMNL2Q96PY5 1086 aa19.48■□□□□ 0.71
CTSD-211ENST00000637387 BTAF1O14981 1849 aa19.47■□□□□ 0.71
CTSD-211ENST00000637387 FLIIQ13045 1269 aa19.47■□□□□ 0.71
CTSD-211ENST00000637387 CCDC136Q96JN2 1154 aa19.47■□□□□ 0.71
CTSD-211ENST00000637387 ZNF831Q5JPB2 1677 aa19.47■□□□□ 0.71
CTSD-211ENST00000637387 PROSER3Q2NL68 480 aa19.45■□□□□ 0.7
CTSD-211ENST00000637387 ITPRIPQ8IWB1 547 aa19.45■□□□□ 0.7
CTSD-211ENST00000637387 PHAXQ9H814 394 aaKnown RBP19.45■□□□□ 0.7
CTSD-211ENST00000637387 COL5A3P25940 1745 aaPredicted RBP19.45■□□□□ 0.7
CTSD-211ENST00000637387 ANXA1P04083 346 aa19.44■□□□□ 0.7
CTSD-211ENST00000637387 SNRPA1P09661 255 aaKnown RBP19.44■□□□□ 0.7
CTSD-211ENST00000637387 PDIA6Q15084 440 aa19.44■□□□□ 0.7
CTSD-211ENST00000637387 ATG3Q9NT62 314 aa19.44■□□□□ 0.7
CTSD-211ENST00000637387 DDX19BQ9UMR2 479 aa19.44■□□□□ 0.7
CTSD-211ENST00000637387 ASAP1Q9ULH1 1129 aa19.44■□□□□ 0.7
CTSD-211ENST00000637387 USP16Q9Y5T5 823 aa19.44■□□□□ 0.7
CTSD-211ENST00000637387 INTS3Q68E01 1043 aaKnown RBP19.43■□□□□ 0.7
CTSD-211ENST00000637387 LRP10Q7Z4F1 713 aa19.43■□□□□ 0.7
CTSD-211ENST00000637387 DBF4Q9UBU7 674 aaPredicted RBP19.43■□□□□ 0.7
CTSD-211ENST00000637387 KDM2BQ8NHM5 1336 aa19.43■□□□□ 0.7
CTSD-211ENST00000637387 CASZ1Q86V15 1759 aa19.42■□□□□ 0.7
CTSD-211ENST00000637387 F6X3S4 739 aa19.42■□□□□ 0.7
CTSD-211ENST00000637387 CHMP4AQ9BY43 222 aa19.42■□□□□ 0.7
CTSD-211ENST00000637387 ADCY9O60503 1353 aa19.42■□□□□ 0.7
CTSD-211ENST00000637387 PRIM1P49642 420 aaKnown RBP19.41■□□□□ 0.7
CTSD-211ENST00000637387 AAMPQ13685 434 aa19.41■□□□□ 0.7
CTSD-211ENST00000637387 SLC15A2Q16348 729 aa19.41■□□□□ 0.7
CTSD-211ENST00000637387 LY75O60449 1722 aa19.41■□□□□ 0.7
CTSD-211ENST00000637387 AFDNP55196 1824 aaKnown RBP19.4■□□□□ 0.7
CTSD-211ENST00000637387 FKBP5Q13451 457 aaPredicted RBP19.4■□□□□ 0.7
CTSD-211ENST00000637387 DDX21Q9NR30 783 aaKnown RBP eCLIP19.4■□□□□ 0.7
CTSD-211ENST00000637387 ZBTB40Q9NUA8 1239 aa19.4■□□□□ 0.7
CTSD-211ENST00000637387 ZBTB7BO15156 539 aaPredicted RBP19.4■□□□□ 0.7
CTSD-211ENST00000637387 PTCD1O75127 700 aaKnown RBP19.4■□□□□ 0.7
CTSD-211ENST00000637387 SLC4A9Q96Q91 983 aa19.4■□□□□ 0.7
CTSD-211ENST00000637387 PCDHB15Q9Y5E8 787 aa19.4■□□□□ 0.7
CTSD-211ENST00000637387 PDGFDQ9GZP0 370 aaPredicted RBP19.39■□□□□ 0.69
CTSD-211ENST00000637387 SPON1Q9HCB6 807 aa19.39■□□□□ 0.69
CTSD-211ENST00000637387 STK32BQ9NY57 414 aa19.39■□□□□ 0.69
CTSD-211ENST00000637387 SYTL4Q96C24 671 aaPredicted RBP19.38■□□□□ 0.69
CTSD-211ENST00000637387 LRRC4BQ9NT99 713 aa19.38■□□□□ 0.69
CTSD-211ENST00000637387 ATP10DQ9P241 1426 aa19.38■□□□□ 0.69
CTSD-211ENST00000637387 ERBB4Q15303 1308 aa19.37■□□□□ 0.69
CTSD-211ENST00000637387 MYH14Q7Z406 1995 aaKnown RBP19.37■□□□□ 0.69
CTSD-211ENST00000637387 HYPKQ9NX55 129 aa19.37■□□□□ 0.69
CTSD-211ENST00000637387 TAF1LQ8IZX4 1826 aa19.37■□□□□ 0.69
CTSD-211ENST00000637387 VSIG10Q8N0Z9 540 aa19.36■□□□□ 0.69
CTSD-211ENST00000637387 NBPF26B4DH59 902 aa19.36■□□□□ 0.69
CTSD-211ENST00000637387 PIP4K2AP48426 406 aaPredicted RBP19.36■□□□□ 0.69
CTSD-211ENST00000637387 NBPF10Q6P3W6 841 aaKnown RBP19.36■□□□□ 0.69
CTSD-211ENST00000637387 NBPF15Q8N660 670 aa19.36■□□□□ 0.69
CTSD-211ENST00000637387 IGHDP01880 384 aa19.35■□□□□ 0.69
CTSD-211ENST00000637387 ANKRD36CQ5JPF3 1778 aa19.35■□□□□ 0.69
CTSD-211ENST00000637387 SLC27A3Q5K4L6 730 aa19.34■□□□□ 0.69
CTSD-211ENST00000637387 DNAJC10Q8IXB1 793 aa19.34■□□□□ 0.69
CTSD-211ENST00000637387 PI4KAP2A4QPH2 592 aa19.33■□□□□ 0.69
CTSD-211ENST00000637387 MYL6BP14649 208 aa19.33■□□□□ 0.69
CTSD-211ENST00000637387 CCT4P50991 539 aaKnown RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms