RNA–Protein interactions for RNA: ENST00000636773.1

CACNB4-233, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 4,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-233	ENST00000636773	XRCC6	P12956	609 aa	Known RBP eCLIP	5.37	□□□□□ -1.55
CACNB4-233	ENST00000636773	SET	Q01105	290 aa	Predicted RBP	5.37	□□□□□ -1.55
CACNB4-233	ENST00000636773	ABCA6	Q8N139	1617 aa		5.37	□□□□□ -1.55
CACNB4-233	ENST00000636773	CT47B1	P0C2W7	299 aa	Predicted RBP	5.37	□□□□□ -1.55
CACNB4-233	ENST00000636773	ERFE	Q4G0M1	354 aa		5.37	□□□□□ -1.55
CACNB4-233	ENST00000636773	SYNE3	Q6ZMZ3	975 aa		5.37	□□□□□ -1.55
CACNB4-233	ENST00000636773	MTERF4	Q7Z6M4	381 aa	Known RBP	5.37	□□□□□ -1.55
CACNB4-233	ENST00000636773	NUTM1	Q86Y26	1132 aa		5.37	□□□□□ -1.55
CACNB4-233	ENST00000636773	SLF2	Q8IX21	1173 aa		5.37	□□□□□ -1.55
CACNB4-233	ENST00000636773	RASSF8	Q8NHQ8	419 aa		5.37	□□□□□ -1.55
CACNB4-233	ENST00000636773	CALR3	Q96L12	384 aa	Known RBP	5.37	□□□□□ -1.55
CACNB4-233	ENST00000636773	TTC21B	Q7Z4L5	1316 aa		5.37	□□□□□ -1.55
CACNB4-233	ENST00000636773	PCDH11X	Q9BZA7	1347 aa		5.37	□□□□□ -1.55
CACNB4-233	ENST00000636773	PCDH11Y	Q9BZA8	1340 aa		5.37	□□□□□ -1.55
CACNB4-233	ENST00000636773	SCAF11	Q99590	1463 aa	Known RBP	5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	PPIP5K2	O43314	1243 aa		5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	MYC	P01106	439 aa	Predicted RBP	5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	TNNI2	P48788	182 aa		5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	PIM2	Q9P1W9	311 aa		5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	RIMBP2	O15034	1052 aa		5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	SLC3A2	P08195	630 aa	Known RBP	5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	IFIT2	P09913	472 aa	Known RBP	5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	IFIT1	P09914	478 aa	Known RBP	5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	POLA2	Q14181	598 aa		5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	DZIP3	Q86Y13	1208 aa	Known RBP	5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	CCDC94	Q9BW85	323 aa	Predicted RBP	5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	RAI14	Q9P0K7	980 aa		5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	CEP126	Q9P2H0	1117 aa		5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	SSUH2	Q9Y2M2	353 aa		5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	CAMSAP2	Q08AD1	1489 aa		5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	DAPK1	P53355	1430 aa		5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	IQCA1L	A6NCM1	817 aa		5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	ALDH1B1	P30837	517 aa		5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	TXNRD1	Q16881	649 aa		5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	TMEM106C	Q9BVX2	250 aa		5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	LRRFIP2	Q9Y608	721 aa	Known RBP	5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	CDC42BPA	Q5VT25	1732 aa		5.36	□□□□□ -1.55
CACNB4-233	ENST00000636773	CLTCL1	P53675	1640 aa		5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	BRD4	O60885	1362 aa	Predicted RBP	5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	MAP3K9	P80192	1104 aa		5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	DZIP1	Q86YF9	867 aa	Known RBP	5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	RBM17	Q96I25	401 aa	Known RBP	5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	PRM3	Q9NNZ6	103 aa		5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	PCF11	O94913	1555 aa	Known RBP	5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773		F8W031	263 aa	Predicted RBP	5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	MSN	P26038	577 aa	Known RBP	5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	MAP2K1	Q02750	393 aa	Predicted RBP	5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	SLC4A8	Q2Y0W8	1093 aa		5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	DPP8	Q6V1X1	898 aa	Predicted RBP	5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	CLUAP1	Q96AJ1	413 aa		5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	GEMIN8	Q9NWZ8	242 aa	Known RBP	5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	N4BP2	Q86UW6	1770 aa	Predicted RBP	5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	MMP10	P09238	476 aa		5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	SNRPA1	P09661	255 aa	Known RBP	5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	GTF2A1	P52655	376 aa	Predicted RBP	5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	TRDN	Q13061	729 aa		5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	LRP2BP	Q9P2M1	347 aa		5.35	□□□□□ -1.55
CACNB4-233	ENST00000636773	UGGT1	Q9NYU2	1555 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	KCNQ2	O43526	872 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	PPP1R12B	O60237	982 aa	Predicted RBP	5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	PDE4A	P27815	886 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	NCOA1	Q15788	1441 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	ERBB4	Q15303	1308 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	NUP153	P49790	1475 aa	Known RBP	5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	UBTFL1	P0CB47	393 aa	Predicted RBP	5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	CA8	P35219	290 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	EZH2	Q15910	746 aa	Known RBP	5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	METTL24	Q5JXM2	366 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	ANKRD18A	Q8IVF6	992 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	C2orf69	Q8N8R5	385 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	SLC16A10	Q8TF71	515 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	HOOK2	Q96ED9	719 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	DCAF5	Q96JK2	942 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	CABP5	Q9NP86	173 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	WDR70	Q9NW82	654 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	IVNS1ABP	Q9Y6Y0	642 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	USP32	Q8NFA0	1604 aa		5.34	□□□□□ -1.55
CACNB4-233	ENST00000636773	SYCP2	Q9BX26	1530 aa		5.34	□□□□□ -1.56
CACNB4-233	ENST00000636773	UGGT2	Q9NYU1	1516 aa		5.34	□□□□□ -1.56
CACNB4-233	ENST00000636773	ERICH2	A1L162	156 aa		5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	IFIT5	Q13325	482 aa	Known RBP	5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	CT47A1	Q5JQC4	288 aa	Predicted RBP	5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	CCDC158	Q5M9N0	1113 aa		5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	TTLL6	Q8N841	843 aa		5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	SMCR8	Q8TEV9	937 aa	Predicted RBP	5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	THRAP3	Q9Y2W1	955 aa	Known RBP	5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	EMILIN1	Q9Y6C2	1016 aa		5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	ECE1	P42892	770 aa		5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	SSR1	P43307	286 aa	Known RBP	5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	TDO2	P48775	406 aa		5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	CCDC152	Q4G0S7	254 aa		5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	TMTC2	Q8N394	836 aa		5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	CSAD	Q9Y600	493 aa		5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	KIAA0232	Q92628	1395 aa		5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	IBTK	Q9P2D0	1353 aa	Predicted RBP	5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	LDHC	P07864	332 aa		5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	SLC39A6	Q13433	755 aa		5.33	□□□□□ -1.56
CACNB4-233	ENST00000636773	TAF7	Q15545	349 aa	Predicted RBP	5.33	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms