RNA–Protein interactions for RNA: ENST00000635841.1

XIST-211, X inactive specific transcript, humanhuman

TSL 5 BASIC

Gene XIST, Length 1,734 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-211ENST00000635841 CHPF2Q9P2E5 772 aa11.27□□□□□ -0.61
XIST-211ENST00000635841 TNNQ9UQP3 1299 aa11.27□□□□□ -0.61
XIST-211ENST00000635841 PTPRCP08575 1304 aa11.27□□□□□ -0.61
XIST-211ENST00000635841 KCNQ2O43526 872 aa11.26□□□□□ -0.61
XIST-211ENST00000635841 RLBP1P12271 317 aa11.26□□□□□ -0.61
XIST-211ENST00000635841 RBM42Q9BTD8 480 aaKnown RBP11.26□□□□□ -0.61
XIST-211ENST00000635841 DBF4Q9UBU7 674 aaPredicted RBP11.26□□□□□ -0.61
XIST-211ENST00000635841 BRWD3Q6RI45 1802 aa11.26□□□□□ -0.61
XIST-211ENST00000635841 G2E3Q7L622 706 aa11.26□□□□□ -0.61
XIST-211ENST00000635841 KRT27Q7Z3Y8 459 aa11.26□□□□□ -0.61
XIST-211ENST00000635841 RGS17Q9UGC6 210 aaPredicted RBP11.26□□□□□ -0.61
XIST-211ENST00000635841 USP16Q9Y5T5 823 aa11.26□□□□□ -0.61
XIST-211ENST00000635841 LAMB4A4D0S4 1761 aa11.26□□□□□ -0.61
XIST-211ENST00000635841 FLIIQ13045 1269 aa11.25□□□□□ -0.61
XIST-211ENST00000635841 VSIG10Q8N0Z9 540 aa11.25□□□□□ -0.61
XIST-211ENST00000635841 SMARCC1Q92922 1105 aaPredicted RBP11.25□□□□□ -0.61
XIST-211ENST00000635841 TEX13AQ9BXU3 409 aaPredicted RBP11.25□□□□□ -0.61
XIST-211ENST00000635841 COG6Q9Y2V7 657 aa11.25□□□□□ -0.61
XIST-211ENST00000635841 ANXA1P04083 346 aa11.24□□□□□ -0.61
XIST-211ENST00000635841 FKBP5Q13451 457 aaPredicted RBP11.24□□□□□ -0.61
XIST-211ENST00000635841 DDX21Q9NR30 783 aaKnown RBP eCLIP11.24□□□□□ -0.61
XIST-211ENST00000635841 HYPKQ9NX55 129 aa11.24□□□□□ -0.61
XIST-211ENST00000635841 PPP4R2Q9NY27 417 aa11.24□□□□□ -0.61
XIST-211ENST00000635841 NHSQ6T4R5 1651 aa11.24□□□□□ -0.61
XIST-211ENST00000635841 SBF2Q86WG5 1849 aa11.24□□□□□ -0.61
XIST-211ENST00000635841 PROSER3Q2NL68 480 aa11.23□□□□□ -0.61
XIST-211ENST00000635841 FAM196AQ6ZSG2 479 aa11.23□□□□□ -0.61
XIST-211ENST00000635841 ITPRIPQ8IWB1 547 aa11.23□□□□□ -0.61
XIST-211ENST00000635841 TMEM57Q8N5G2 664 aa11.23□□□□□ -0.61
XIST-211ENST00000635841 PHAXQ9H814 394 aaKnown RBP11.23□□□□□ -0.61
XIST-211ENST00000635841 ABCC4O15439 1325 aa11.23□□□□□ -0.61
XIST-211ENST00000635841 MVPQ14764 893 aaKnown RBP11.23□□□□□ -0.61
XIST-211ENST00000635841 PDIA6Q15084 440 aa11.23□□□□□ -0.61
XIST-211ENST00000635841 POTEAQ6S8J7 498 aa11.23□□□□□ -0.61
XIST-211ENST00000635841 DNAJC10Q8IXB1 793 aa11.23□□□□□ -0.61
XIST-211ENST00000635841 PALLDQ8WX93 1383 aa11.23□□□□□ -0.61
XIST-211ENST00000635841 BTAF1O14981 1849 aa11.23□□□□□ -0.61
XIST-211ENST00000635841 ERBB4Q15303 1308 aa11.22□□□□□ -0.61
XIST-211ENST00000635841 RGS12O14924 1447 aa11.22□□□□□ -0.61
XIST-211ENST00000635841 STARD3NLO95772 234 aa11.22□□□□□ -0.61
XIST-211ENST00000635841 MYL6BP14649 208 aa11.22□□□□□ -0.61
XIST-211ENST00000635841 PTF1AQ7RTS3 328 aa11.22□□□□□ -0.61
XIST-211ENST00000635841 SLC4A9Q96Q91 983 aa11.22□□□□□ -0.61
XIST-211ENST00000635841 LOC102724428A0A0B4J2F2 783 aa11.21□□□□□ -0.61
XIST-211ENST00000635841 F6X3S4 739 aa11.21□□□□□ -0.61
XIST-211ENST00000635841 SIK1P57059 783 aa11.21□□□□□ -0.61
XIST-211ENST00000635841 DDX19BQ9UMR2 479 aa11.21□□□□□ -0.61
XIST-211ENST00000635841 A1BGP04217 495 aa11.21□□□□□ -0.62
XIST-211ENST00000635841 ATP6V1AP38606 617 aa11.21□□□□□ -0.62
XIST-211ENST00000635841 PIP4K2AP48426 406 aaPredicted RBP11.21□□□□□ -0.62
XIST-211ENST00000635841 AIMP1Q12904 312 aaKnown RBP11.21□□□□□ -0.62
XIST-211ENST00000635841 SLC4A10Q6U841 1118 aa11.21□□□□□ -0.62
XIST-211ENST00000635841 BCL11BQ9C0K0 894 aaPredicted RBP11.21□□□□□ -0.62
XIST-211ENST00000635841 TJP1Q07157 1748 aa11.2□□□□□ -0.62
XIST-211ENST00000635841 NBPF26B4DH59 902 aa11.2□□□□□ -0.62
XIST-211ENST00000635841 DDX58O95786 925 aaKnown RBP11.2□□□□□ -0.62
XIST-211ENST00000635841 AAMPQ13685 434 aa11.2□□□□□ -0.62
XIST-211ENST00000635841 NBPF14Q5TI25 921 aa11.2□□□□□ -0.62
XIST-211ENST00000635841 INTS3Q68E01 1043 aaKnown RBP11.2□□□□□ -0.62
XIST-211ENST00000635841 NBPF10Q6P3W6 841 aaKnown RBP11.2□□□□□ -0.62
XIST-211ENST00000635841 NBPF15Q8N660 670 aa11.2□□□□□ -0.62
XIST-211ENST00000635841 XAGE3Q8WTP9 111 aa11.2□□□□□ -0.62
XIST-211ENST00000635841 CHMP4BQ9H444 224 aaKnown RBP11.2□□□□□ -0.62
XIST-211ENST00000635841 PI4KAP2A4QPH2 592 aa11.19□□□□□ -0.62
XIST-211ENST00000635841 CYP19A1P11511 503 aaPredicted RBP11.19□□□□□ -0.62
XIST-211ENST00000635841 CCT4P50991 539 aaKnown RBP11.19□□□□□ -0.62
XIST-211ENST00000635841 COPS6Q7L5N1 327 aa11.19□□□□□ -0.62
XIST-211ENST00000635841 PI4KAP1Q8N8J0 262 aa11.19□□□□□ -0.62
XIST-211ENST00000635841 CCDC136Q96JN2 1154 aa11.19□□□□□ -0.62
XIST-211ENST00000635841 KSR2Q6VAB6 950 aa11.18□□□□□ -0.62
XIST-211ENST00000635841 LRP10Q7Z4F1 713 aa11.18□□□□□ -0.62
XIST-211ENST00000635841 DNAAF4Q8WXU2 420 aa11.18□□□□□ -0.62
XIST-211ENST00000635841 ADCY9O60503 1353 aa11.18□□□□□ -0.62
XIST-211ENST00000635841 TRIM37O94972 964 aa11.18□□□□□ -0.62
XIST-211ENST00000635841 ITPK1Q13572 414 aa11.18□□□□□ -0.62
XIST-211ENST00000635841 B4GALNT3Q6L9W6 998 aa11.18□□□□□ -0.62
XIST-211ENST00000635841 MAP3K2Q9Y2U5 619 aa11.18□□□□□ -0.62
XIST-211ENST00000635841 CICQ96RK0 1608 aaPredicted RBP11.18□□□□□ -0.62
XIST-211ENST00000635841 PXDNLA1KZ92 1463 aa11.17□□□□□ -0.62
XIST-211ENST00000635841 ZNF831Q5JPB2 1677 aa11.17□□□□□ -0.62
XIST-211ENST00000635841 ANKRD13DQ6ZTN6 518 aa11.17□□□□□ -0.62
XIST-211ENST00000635841 RIC3Q7Z5B4 369 aa11.17□□□□□ -0.62
XIST-211ENST00000635841 ZNF330Q9Y3S2 320 aaPredicted RBP11.17□□□□□ -0.62
XIST-211ENST00000635841 ZBTB7BO15156 539 aaPredicted RBP11.16□□□□□ -0.62
XIST-211ENST00000635841 CRKLP46109 303 aaKnown RBP11.16□□□□□ -0.62
XIST-211ENST00000635841 SRCIN1Q9C0H9 1055 aa11.16□□□□□ -0.62
XIST-211ENST00000635841 CCDC87Q9NVE4 849 aa11.16□□□□□ -0.62
XIST-211ENST00000635841 N4BP2Q86UW6 1770 aaPredicted RBP11.16□□□□□ -0.62
XIST-211ENST00000635841 LY75O60449 1722 aa11.16□□□□□ -0.62
XIST-211ENST00000635841 NPM2Q86SE8 214 aaKnown RBP11.15□□□□□ -0.62
XIST-211ENST00000635841 ZBTB40Q9NUA8 1239 aa11.15□□□□□ -0.62
XIST-211ENST00000635841 CCNL1Q9UK58 526 aaPredicted RBP11.15□□□□□ -0.62
XIST-211ENST00000635841 ZBTB1Q9Y2K1 713 aa11.15□□□□□ -0.62
XIST-211ENST00000635841 COL5A3P25940 1745 aaPredicted RBP11.15□□□□□ -0.62
XIST-211ENST00000635841 KCNQ4P56696 695 aa11.15□□□□□ -0.63
XIST-211ENST00000635841 NEXNQ0ZGT2 675 aa11.15□□□□□ -0.63
XIST-211ENST00000635841 BEND3Q5T5X7 828 aa11.15□□□□□ -0.63
XIST-211ENST00000635841 INTS5Q6P9B9 1019 aaKnown RBP11.15□□□□□ -0.63
XIST-211ENST00000635841 TTLL7Q6ZT98 887 aa11.15□□□□□ -0.63
XIST-211ENST00000635841 LINC00116Q8NCU8 138 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms