RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 STARD3NLO95772 234 aa16.91■□□□□ 0.3
PTPN11-206ENST00000635652 CANXP27824 592 aaKnown RBP16.91■□□□□ 0.3
PTPN11-206ENST00000635652 TM4SF1P30408 202 aa16.91■□□□□ 0.3
PTPN11-206ENST00000635652 PIM2Q9P1W9 311 aa16.91■□□□□ 0.3
PTPN11-206ENST00000635652 NUDCQ9Y266 331 aa16.91■□□□□ 0.3
PTPN11-206ENST00000635652 POLRMTO00411 1230 aaKnown RBP16.9■□□□□ 0.3
PTPN11-206ENST00000635652 PRKAR2BP31323 418 aa16.9■□□□□ 0.3
PTPN11-206ENST00000635652 NARFQ9UHQ1 456 aa16.9■□□□□ 0.3
PTPN11-206ENST00000635652 COL15A1P39059 1388 aa16.89■□□□□ 0.3
PTPN11-206ENST00000635652 KCNA3P22001 575 aa16.89■□□□□ 0.29
PTPN11-206ENST00000635652 ZNF790Q6PG37 636 aa16.89■□□□□ 0.29
PTPN11-206ENST00000635652 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
PTPN11-206ENST00000635652 UBR2Q8IWV8 1755 aa16.89■□□□□ 0.29
PTPN11-206ENST00000635652 BRCA1P38398 1863 aaKnown RBP16.88■□□□□ 0.29
PTPN11-206ENST00000635652 U2AF1L5P0DN76 240 aaPredicted RBP16.88■□□□□ 0.29
PTPN11-206ENST00000635652 PPP2R1AP30153 589 aa16.88■□□□□ 0.29
PTPN11-206ENST00000635652 U2AF1Q01081 240 aaKnown RBP eCLIP16.88■□□□□ 0.29
PTPN11-206ENST00000635652 DALRD3Q5D0E6 543 aaKnown RBP16.88■□□□□ 0.29
PTPN11-206ENST00000635652 ZNF496Q96IT1 587 aaPredicted RBP16.88■□□□□ 0.29
PTPN11-206ENST00000635652 RSPH6AQ9H0K4 717 aa16.88■□□□□ 0.29
PTPN11-206ENST00000635652 CHRNA5P30532 468 aa16.87■□□□□ 0.29
PTPN11-206ENST00000635652 NFIXQ14938 502 aa16.87■□□□□ 0.29
PTPN11-206ENST00000635652 TEX13AQ9BXU3 409 aaPredicted RBP16.87■□□□□ 0.29
PTPN11-206ENST00000635652 BTBD11A6QL63 1104 aa16.86■□□□□ 0.29
PTPN11-206ENST00000635652 FMNL2Q96PY5 1086 aa16.86■□□□□ 0.29
PTPN11-206ENST00000635652 ZNF330Q9Y3S2 320 aaPredicted RBP16.86■□□□□ 0.29
PTPN11-206ENST00000635652 HEG1Q9ULI3 1381 aa16.86■□□□□ 0.29
PTPN11-206ENST00000635652 SIPA1L3O60292 1781 aaPredicted RBP16.85■□□□□ 0.29
PTPN11-206ENST00000635652 AFDNP55196 1824 aaKnown RBP16.85■□□□□ 0.29
PTPN11-206ENST00000635652 ARFGEF1Q9Y6D6 1849 aa16.85■□□□□ 0.29
PTPN11-206ENST00000635652 A0A087WZG4 1122 aa16.85■□□□□ 0.29
PTPN11-206ENST00000635652 EIF5P55010 431 aaKnown RBP16.85■□□□□ 0.29
PTPN11-206ENST00000635652 RTF1Q92541 710 aaKnown RBP16.85■□□□□ 0.29
PTPN11-206ENST00000635652 BCL2L12Q9HB09 334 aa16.85■□□□□ 0.29
PTPN11-206ENST00000635652 SERPINB2P05120 415 aa16.84■□□□□ 0.29
PTPN11-206ENST00000635652 BICDL1Q6ZP65 573 aa16.84■□□□□ 0.29
PTPN11-206ENST00000635652 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
PTPN11-206ENST00000635652 CEMIPQ8WUJ3 1361 aa16.83■□□□□ 0.28
PTPN11-206ENST00000635652 KCNQ3O43525 872 aa16.82■□□□□ 0.28
PTPN11-206ENST00000635652 A1BGP04217 495 aa16.82■□□□□ 0.28
PTPN11-206ENST00000635652 C9orf131Q5VYM1 1079 aa16.82■□□□□ 0.28
PTPN11-206ENST00000635652 TBC1D2BQ9UPU7 963 aa16.82■□□□□ 0.28
PTPN11-206ENST00000635652 KIF3CO14782 793 aa16.81■□□□□ 0.28
PTPN11-206ENST00000635652 IL6STP40189 918 aaPredicted RBP16.81■□□□□ 0.28
PTPN11-206ENST00000635652 MCM10Q7L590 875 aa16.81■□□□□ 0.28
PTPN11-206ENST00000635652 TBC1D9BQ66K14 1250 aa16.8■□□□□ 0.28
PTPN11-206ENST00000635652 H0YIN7 160 aa16.79■□□□□ 0.28
PTPN11-206ENST00000635652 DCTN1Q14203 1278 aa16.79■□□□□ 0.28
PTPN11-206ENST00000635652 C2CD5Q86YS7 1000 aa16.79■□□□□ 0.28
PTPN11-206ENST00000635652 RNF181Q9P0P0 153 aa16.79■□□□□ 0.28
PTPN11-206ENST00000635652 NRXN2Q9P2S2 1712 aa16.79■□□□□ 0.28
PTPN11-206ENST00000635652 NEFMP07197 916 aa16.78■□□□□ 0.28
PTPN11-206ENST00000635652 HSPA6P17066 643 aa16.78■□□□□ 0.28
PTPN11-206ENST00000635652 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
PTPN11-206ENST00000635652 NPHP1O15259 732 aa16.77■□□□□ 0.28
PTPN11-206ENST00000635652 HTATSF1O43719 755 aaKnown RBP16.77■□□□□ 0.28
PTPN11-206ENST00000635652 PIP4K2AP48426 406 aaPredicted RBP16.77■□□□□ 0.28
PTPN11-206ENST00000635652 TTLL6Q8N841 843 aa16.77■□□□□ 0.28
PTPN11-206ENST00000635652 SETDB2Q96T68 719 aa16.77■□□□□ 0.28
PTPN11-206ENST00000635652 SBF1O95248 1867 aa16.77■□□□□ 0.27
PTPN11-206ENST00000635652 PRAMEF22A3QJZ6 481 aa16.76■□□□□ 0.27
PTPN11-206ENST00000635652 SNRPA1P09661 255 aaKnown RBP16.76■□□□□ 0.27
PTPN11-206ENST00000635652 CCDC24Q8N4L8 307 aa16.76■□□□□ 0.27
PTPN11-206ENST00000635652 NMRK2Q9NPI5 230 aa16.76■□□□□ 0.27
PTPN11-206ENST00000635652 CARMIL3Q8ND23 1372 aa16.76■□□□□ 0.27
PTPN11-206ENST00000635652 TOMM70O94826 608 aa16.75■□□□□ 0.27
PTPN11-206ENST00000635652 DZIP3Q86Y13 1208 aaKnown RBP16.75■□□□□ 0.27
PTPN11-206ENST00000635652 ZNF622Q969S3 477 aaKnown RBP eCLIP16.75■□□□□ 0.27
PTPN11-206ENST00000635652 DLEC1Q9Y238 1755 aa16.74■□□□□ 0.27
PTPN11-206ENST00000635652 KDM2BQ8NHM5 1336 aa16.74■□□□□ 0.27
PTPN11-206ENST00000635652 CAMTA2O94983 1202 aa16.74■□□□□ 0.27
PTPN11-206ENST00000635652 PDE6BP35913 854 aa16.74■□□□□ 0.27
PTPN11-206ENST00000635652 RASSF7Q02833 373 aa16.74■□□□□ 0.27
PTPN11-206ENST00000635652 TAF7Q15545 349 aaPredicted RBP16.74■□□□□ 0.27
PTPN11-206ENST00000635652 PRR5LQ6MZQ0 368 aa16.74■□□□□ 0.27
PTPN11-206ENST00000635652 C16orf71Q8IYS4 520 aaPredicted RBP16.74■□□□□ 0.27
PTPN11-206ENST00000635652 BRIP1Q9BX63 1249 aa16.74■□□□□ 0.27
PTPN11-206ENST00000635652 MIS18AQ9NYP9 233 aa16.74■□□□□ 0.27
PTPN11-206ENST00000635652 SCN7AQ01118 1682 aa16.74■□□□□ 0.27
PTPN11-206ENST00000635652 CNBD1Q8NA66 436 aa16.73■□□□□ 0.27
PTPN11-206ENST00000635652 PDZRN3Q9UPQ7 1066 aa16.73■□□□□ 0.27
PTPN11-206ENST00000635652 CCDC88AQ3V6T2 1871 aa16.72■□□□□ 0.27
PTPN11-206ENST00000635652 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
PTPN11-206ENST00000635652 ANKRD31Q8N7Z5 1873 aa16.71■□□□□ 0.27
PTPN11-206ENST00000635652 DLG5Q8TDM6 1919 aa16.71■□□□□ 0.27
PTPN11-206ENST00000635652 LMNB1P20700 586 aa16.71■□□□□ 0.27
PTPN11-206ENST00000635652 ST5P78524 1137 aa16.71■□□□□ 0.27
PTPN11-206ENST00000635652 ZNF652Q9Y2D9 606 aa16.71■□□□□ 0.27
PTPN11-206ENST00000635652 PNNQ9H307 717 aaKnown RBP16.7■□□□□ 0.26
PTPN11-206ENST00000635652 RRAGCQ9HB90 399 aa16.7■□□□□ 0.26
PTPN11-206ENST00000635652 MAPK8IP3Q9UPT6 1336 aa16.7■□□□□ 0.26
PTPN11-206ENST00000635652 NBPF26B4DH59 902 aa16.69■□□□□ 0.26
PTPN11-206ENST00000635652 C21orf2O43822 256 aa16.69■□□□□ 0.26
PTPN11-206ENST00000635652 NBPF10Q6P3W6 841 aaKnown RBP16.69■□□□□ 0.26
PTPN11-206ENST00000635652 CLEC4GQ6UXB4 293 aa16.69■□□□□ 0.26
PTPN11-206ENST00000635652 NBPF5PQ86XG9 351 aaPredicted RBP16.69■□□□□ 0.26
PTPN11-206ENST00000635652 NBPF15Q8N660 670 aa16.69■□□□□ 0.26
PTPN11-206ENST00000635652 PLEKHF1Q96S99 279 aa16.69■□□□□ 0.26
PTPN11-206ENST00000635652 BCORQ6W2J9 1755 aa16.69■□□□□ 0.26
PTPN11-206ENST00000635652 APLP1P51693 650 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms