RNA–Protein interactions for RNA: ENST00000634846.1

AC004554.2-201, humanhuman

TSL 5 BASIC

Gene AC004554.2, Length 1,893 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004554.2-201ENST00000634846 GPR162Q16538 588 aa16.54■□□□□ 0.24
AC004554.2-201ENST00000634846 FMNL2Q96PY5 1086 aa16.54■□□□□ 0.24
AC004554.2-201ENST00000634846 SCN7AQ01118 1682 aa16.53■□□□□ 0.24
AC004554.2-201ENST00000634846 AFDNP55196 1824 aaKnown RBP16.53■□□□□ 0.24
AC004554.2-201ENST00000634846 PELP1Q8IZL8 1130 aaKnown RBP16.53■□□□□ 0.24
AC004554.2-201ENST00000634846 LAMB4A4D0S4 1761 aa16.53■□□□□ 0.24
AC004554.2-201ENST00000634846 C10orf71Q711Q0 1435 aa16.52■□□□□ 0.24
AC004554.2-201ENST00000634846 STARD3NLO95772 234 aa16.52■□□□□ 0.24
AC004554.2-201ENST00000634846 NFE2L2Q16236 605 aa16.52■□□□□ 0.24
AC004554.2-201ENST00000634846 PNNQ9H307 717 aaKnown RBP16.52■□□□□ 0.24
AC004554.2-201ENST00000634846 MAPK8IP3Q9UPT6 1336 aa16.52■□□□□ 0.24
AC004554.2-201ENST00000634846 BRCA1P38398 1863 aaKnown RBP16.52■□□□□ 0.24
AC004554.2-201ENST00000634846 UTRNP46939 3433 aa16.52■□□□□ 0.23
AC004554.2-201ENST00000634846 FKBP8Q14318 412 aa16.52■□□□□ 0.23
AC004554.2-201ENST00000634846 TEX13AQ9BXU3 409 aaPredicted RBP16.52■□□□□ 0.23
AC004554.2-201ENST00000634846 GOLGB1Q14789 3259 aaKnown RBP16.52■□□□□ 0.23
AC004554.2-201ENST00000634846 YBX3P16989 372 aaKnown RBP eCLIP16.51■□□□□ 0.23
AC004554.2-201ENST00000634846 PRKRIP1Q9H875 184 aaPredicted RBP16.51■□□□□ 0.23
AC004554.2-201ENST00000634846 PXDNLA1KZ92 1463 aa16.51■□□□□ 0.23
AC004554.2-201ENST00000634846 BCORQ6W2J9 1755 aa16.5■□□□□ 0.23
AC004554.2-201ENST00000634846 CANXP27824 592 aaKnown RBP16.5■□□□□ 0.23
AC004554.2-201ENST00000634846 NRXN2Q9P2S2 1712 aa16.5■□□□□ 0.23
AC004554.2-201ENST00000634846 ZPR1O75312 459 aa16.5■□□□□ 0.23
AC004554.2-201ENST00000634846 USPL1Q5W0Q7 1092 aa16.5■□□□□ 0.23
AC004554.2-201ENST00000634846 NARFQ9UHQ1 456 aa16.5■□□□□ 0.23
AC004554.2-201ENST00000634846 PARP3Q9Y6F1 533 aa16.5■□□□□ 0.23
AC004554.2-201ENST00000634846 EIF5P55010 431 aaKnown RBP16.49■□□□□ 0.23
AC004554.2-201ENST00000634846 DDR1Q08345 913 aa16.49■□□□□ 0.23
AC004554.2-201ENST00000634846 TAF7Q15545 349 aaPredicted RBP16.49■□□□□ 0.23
AC004554.2-201ENST00000634846 PRAMEF22A3QJZ6 481 aa16.47■□□□□ 0.23
AC004554.2-201ENST00000634846 A1BGP04217 495 aa16.47■□□□□ 0.23
AC004554.2-201ENST00000634846 TM4SF1P30408 202 aa16.47■□□□□ 0.23
AC004554.2-201ENST00000634846 THUMPD2Q9BTF0 503 aaKnown RBP16.47■□□□□ 0.23
AC004554.2-201ENST00000634846 BCL2L12Q9HB09 334 aa16.47■□□□□ 0.23
AC004554.2-201ENST00000634846 GRIN3BO60391 1043 aa16.46■□□□□ 0.23
AC004554.2-201ENST00000634846 IL6STP40189 918 aaPredicted RBP16.46■□□□□ 0.23
AC004554.2-201ENST00000634846 MIS18AQ9NYP9 233 aa16.46■□□□□ 0.23
AC004554.2-201ENST00000634846 USP16Q9Y5T5 823 aa16.46■□□□□ 0.23
AC004554.2-201ENST00000634846 A0A087WZG4 1122 aa16.46■□□□□ 0.22
AC004554.2-201ENST00000634846 POLRMTO00411 1230 aaKnown RBP16.46■□□□□ 0.22
AC004554.2-201ENST00000634846 SNRPA1P09661 255 aaKnown RBP16.46■□□□□ 0.22
AC004554.2-201ENST00000634846 TGFB2P61812 414 aa16.45■□□□□ 0.22
AC004554.2-201ENST00000634846 PNISRQ8TF01 805 aaKnown RBP16.45■□□□□ 0.22
AC004554.2-201ENST00000634846 ARFGEF1Q9Y6D6 1849 aa16.45■□□□□ 0.22
AC004554.2-201ENST00000634846 TMPOP42166 694 aaKnown RBP16.44■□□□□ 0.22
AC004554.2-201ENST00000634846 NFIXQ14938 502 aa16.44■□□□□ 0.22
AC004554.2-201ENST00000634846 WDR43Q15061 677 aaKnown RBP eCLIP16.44■□□□□ 0.22
AC004554.2-201ENST00000634846 CCDC146Q8IYE0 955 aa16.44■□□□□ 0.22
AC004554.2-201ENST00000634846 WWC3Q9ULE0 1092 aa16.44■□□□□ 0.22
AC004554.2-201ENST00000634846 DLEC1Q9Y238 1755 aa16.44■□□□□ 0.22
AC004554.2-201ENST00000634846 RIPK4P57078 832 aa16.44■□□□□ 0.22
AC004554.2-201ENST00000634846 ZNF330Q9Y3S2 320 aaPredicted RBP16.44■□□□□ 0.22
AC004554.2-201ENST00000634846 ANKRD31Q8N7Z5 1873 aa16.42■□□□□ 0.22
AC004554.2-201ENST00000634846 A0A0G2JLW4 131 aa16.42■□□□□ 0.22
AC004554.2-201ENST00000634846 DPEP1P16444 411 aa16.42■□□□□ 0.22
AC004554.2-201ENST00000634846 PIP4K2AP48426 406 aaPredicted RBP16.42■□□□□ 0.22
AC004554.2-201ENST00000634846 ADAMTS8Q9UP79 889 aa16.42■□□□□ 0.22
AC004554.2-201ENST00000634846 TBC1D2BQ9UPU7 963 aa16.42■□□□□ 0.22
AC004554.2-201ENST00000634846 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
AC004554.2-201ENST00000634846 RUNDC1Q96C34 613 aa16.42■□□□□ 0.22
AC004554.2-201ENST00000634846 EIF4A1P60842 406 aaKnown RBP16.41■□□□□ 0.22
AC004554.2-201ENST00000634846 LMOD3Q0VAK6 560 aa16.41■□□□□ 0.22
AC004554.2-201ENST00000634846 RRP7AQ9Y3A4 280 aaKnown RBP16.41■□□□□ 0.22
AC004554.2-201ENST00000634846 NBPF26B4DH59 902 aa16.4■□□□□ 0.22
AC004554.2-201ENST00000634846 CAMTA2O94983 1202 aa16.4■□□□□ 0.22
AC004554.2-201ENST00000634846 NBPF10Q6P3W6 841 aaKnown RBP16.4■□□□□ 0.22
AC004554.2-201ENST00000634846 NBPF15Q8N660 670 aa16.4■□□□□ 0.22
AC004554.2-201ENST00000634846 ZNF784Q8NCA9 323 aaPredicted RBP16.4■□□□□ 0.22
AC004554.2-201ENST00000634846 GIGYF1O75420 1035 aaPredicted RBP16.39■□□□□ 0.22
AC004554.2-201ENST00000634846 SERPINB2P05120 415 aa16.39■□□□□ 0.22
AC004554.2-201ENST00000634846 KCNA3P22001 575 aa16.39■□□□□ 0.22
AC004554.2-201ENST00000634846 TBC1D9BQ66K14 1250 aa16.39■□□□□ 0.22
AC004554.2-201ENST00000634846 NPM2Q86SE8 214 aaKnown RBP16.39■□□□□ 0.22
AC004554.2-201ENST00000634846 DZIP3Q86Y13 1208 aaKnown RBP16.39■□□□□ 0.22
AC004554.2-201ENST00000634846 BICDL1Q6ZP65 573 aa16.39■□□□□ 0.21
AC004554.2-201ENST00000634846 NEUROD2Q15784 382 aa16.38■□□□□ 0.21
AC004554.2-201ENST00000634846 TSPYL4Q9UJ04 414 aa16.38■□□□□ 0.21
AC004554.2-201ENST00000634846 NUP98P52948 1817 aa16.38■□□□□ 0.21
AC004554.2-201ENST00000634846 CARMIL3Q8ND23 1372 aa16.38■□□□□ 0.21
AC004554.2-201ENST00000634846 COL11A2P13942 1736 aaPredicted RBP16.38■□□□□ 0.21
AC004554.2-201ENST00000634846 TRIM35Q9UPQ4 493 aa16.37■□□□□ 0.21
AC004554.2-201ENST00000634846 BCS1LQ9Y276 419 aa16.37■□□□□ 0.21
AC004554.2-201ENST00000634846 CHRNA5P30532 468 aa16.37■□□□□ 0.21
AC004554.2-201ENST00000634846 BABAM1Q9NWV8 329 aa16.37■□□□□ 0.21
AC004554.2-201ENST00000634846 PIM2Q9P1W9 311 aa16.35■□□□□ 0.21
AC004554.2-201ENST00000634846 CCDC184Q52MB2 194 aa16.35■□□□□ 0.21
AC004554.2-201ENST00000634846 CACNA1SQ13698 1873 aa16.34■□□□□ 0.21
AC004554.2-201ENST00000634846 ADCY9O60503 1353 aa16.34■□□□□ 0.21
AC004554.2-201ENST00000634846 CLEC4GQ6UXB4 293 aa16.33■□□□□ 0.21
AC004554.2-201ENST00000634846 SETDB2Q96T68 719 aa16.33■□□□□ 0.21
AC004554.2-201ENST00000634846 SBF1O95248 1867 aa16.33■□□□□ 0.2
AC004554.2-201ENST00000634846 RGL2O15211 777 aa16.33■□□□□ 0.2
AC004554.2-201ENST00000634846 DALRD3Q5D0E6 543 aaKnown RBP16.33■□□□□ 0.2
AC004554.2-201ENST00000634846 PRR5LQ6MZQ0 368 aa16.33■□□□□ 0.2
AC004554.2-201ENST00000634846 ZNF652Q9Y2D9 606 aa16.33■□□□□ 0.2
AC004554.2-201ENST00000634846 ARFGEF2Q9Y6D5 1785 aa16.32■□□□□ 0.2
AC004554.2-201ENST00000634846 CHL1O00533 1208 aa16.32■□□□□ 0.2
AC004554.2-201ENST00000634846 ERBB4Q15303 1308 aa16.32■□□□□ 0.2
AC004554.2-201ENST00000634846 ATP10DQ9P241 1426 aa16.32■□□□□ 0.2
AC004554.2-201ENST00000634846 APAF1O14727 1248 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms