RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-233ENST00000630543 FSD1Q9BTV5 496 aa16.2■□□□□ 0.18
NRXN1-233ENST00000630543 ERBB3P21860 1342 aa16.2■□□□□ 0.18
NRXN1-233ENST00000630543 CNTROBQ8N137 903 aa16.2■□□□□ 0.18
NRXN1-233ENST00000630543 ABCC4O15439 1325 aa16.19■□□□□ 0.18
NRXN1-233ENST00000630543 GPTP24298 496 aa16.19■□□□□ 0.18
NRXN1-233ENST00000630543 CCDC8Q9H0W5 538 aaPredicted RBP16.19■□□□□ 0.18
NRXN1-233ENST00000630543 PA2G4Q9UQ80 394 aaKnown RBP16.19■□□□□ 0.18
NRXN1-233ENST00000630543 USP31Q70CQ4 1352 aa16.19■□□□□ 0.18
NRXN1-233ENST00000630543 NFKBIBQ15653 356 aa16.19■□□□□ 0.18
NRXN1-233ENST00000630543 KSR2Q6VAB6 950 aa16.19■□□□□ 0.18
NRXN1-233ENST00000630543 KIF1BPQ96EK5 621 aa16.19■□□□□ 0.18
NRXN1-233ENST00000630543 DCTPP1Q9H773 170 aa16.19■□□□□ 0.18
NRXN1-233ENST00000630543 BMP2KLQ5H9B9 411 aa16.18■□□□□ 0.18
NRXN1-233ENST00000630543 RUFY2Q8WXA3 655 aa16.18■□□□□ 0.18
NRXN1-233ENST00000630543 SLC52A2Q9HAB3 445 aa16.18■□□□□ 0.18
NRXN1-233ENST00000630543 STARD3NLO95772 234 aa16.18■□□□□ 0.18
NRXN1-233ENST00000630543 CWC27Q6UX04 472 aaKnown RBP16.17■□□□□ 0.18
NRXN1-233ENST00000630543 NEK4P51957 841 aa16.17■□□□□ 0.18
NRXN1-233ENST00000630543 PNMA6EA0A0J9YXQ4 647 aa16.17■□□□□ 0.18
NRXN1-233ENST00000630543 NBPF7P0C2Y1 421 aaPredicted RBP16.17■□□□□ 0.18
NRXN1-233ENST00000630543 ERC1Q8IUD2 1116 aa16.17■□□□□ 0.18
NRXN1-233ENST00000630543 FRAT2O75474 233 aaPredicted RBP16.17■□□□□ 0.18
NRXN1-233ENST00000630543 PHKG2P15735 406 aa16.17■□□□□ 0.18
NRXN1-233ENST00000630543 ATP8B2P98198 1209 aa16.17■□□□□ 0.18
NRXN1-233ENST00000630543 GBP4Q96PP9 640 aa16.16■□□□□ 0.18
NRXN1-233ENST00000630543 IQSEC2Q5JU85 1478 aa16.16■□□□□ 0.18
NRXN1-233ENST00000630543 PROSER3Q2NL68 480 aa16.16■□□□□ 0.18
NRXN1-233ENST00000630543 SDSP20132 328 aa16.16■□□□□ 0.18
NRXN1-233ENST00000630543 TTC22Q5TAA0 569 aa16.16■□□□□ 0.18
NRXN1-233ENST00000630543 C8orf37Q96NL8 207 aa16.15■□□□□ 0.18
NRXN1-233ENST00000630543 BOLA2Q9H3K6 86 aa16.15■□□□□ 0.18
NRXN1-233ENST00000630543 USP16Q9Y5T5 823 aa16.15■□□□□ 0.18
NRXN1-233ENST00000630543 GIGYF1O75420 1035 aaPredicted RBP16.15■□□□□ 0.18
NRXN1-233ENST00000630543 RTL1A6NKG5 1358 aa16.15■□□□□ 0.18
NRXN1-233ENST00000630543 GRM8O00222 908 aa16.15■□□□□ 0.18
NRXN1-233ENST00000630543 HSP90B1P14625 803 aaKnown RBP16.15■□□□□ 0.18
NRXN1-233ENST00000630543 DDX21Q9NR30 783 aaKnown RBP eCLIP16.15■□□□□ 0.18
NRXN1-233ENST00000630543 PLEKHM2Q8IWE5 1019 aa16.14■□□□□ 0.17
NRXN1-233ENST00000630543 RHPN1Q8TCX5 695 aa16.14■□□□□ 0.17
NRXN1-233ENST00000630543 C1orf167Q5SNV9 1468 aa16.14■□□□□ 0.17
NRXN1-233ENST00000630543 TBC1D32Q96NH3 1257 aa16.14■□□□□ 0.17
NRXN1-233ENST00000630543 TOM1O60784 492 aa16.14■□□□□ 0.17
NRXN1-233ENST00000630543 A1BGP04217 495 aa16.14■□□□□ 0.17
NRXN1-233ENST00000630543 BICDL1Q6ZP65 573 aa16.14■□□□□ 0.17
NRXN1-233ENST00000630543 CHMP5Q9NZZ3 219 aa16.14■□□□□ 0.17
NRXN1-233ENST00000630543 PDE1AP54750 535 aa16.13■□□□□ 0.17
NRXN1-233ENST00000630543 CCDC57Q2TAC2 916 aa16.13■□□□□ 0.17
NRXN1-233ENST00000630543 PCDH11XQ9BZA7 1347 aa16.13■□□□□ 0.17
NRXN1-233ENST00000630543 PCDH11YQ9BZA8 1340 aa16.13■□□□□ 0.17
NRXN1-233ENST00000630543 UBR1Q8IWV7 1749 aa16.13■□□□□ 0.17
NRXN1-233ENST00000630543 TBC1D2Q9BYX2 928 aa16.13■□□□□ 0.17
NRXN1-233ENST00000630543 ARHGAP23Q9P227 1491 aa16.13■□□□□ 0.17
NRXN1-233ENST00000630543 SPATA31A3Q5VYP0 1347 aa16.13■□□□□ 0.17
NRXN1-233ENST00000630543 LINS1Q8NG48 757 aa16.13■□□□□ 0.17
NRXN1-233ENST00000630543 BABAM1Q9NWV8 329 aa16.13■□□□□ 0.17
NRXN1-233ENST00000630543 SLIT1O75093 1534 aa16.13■□□□□ 0.17
NRXN1-233ENST00000630543 RAB11FIP3O75154 756 aa16.12■□□□□ 0.17
NRXN1-233ENST00000630543 ZKSCAN1P17029 563 aaPredicted RBP16.12■□□□□ 0.17
NRXN1-233ENST00000630543 CNNM1Q9NRU3 951 aa16.12■□□□□ 0.17
NRXN1-233ENST00000630543 COL3A1P02461 1466 aaPredicted RBP16.12■□□□□ 0.17
NRXN1-233ENST00000630543 KLHDC4Q8TBB5 520 aa16.12■□□□□ 0.17
NRXN1-233ENST00000630543 SIRT2Q8IXJ6 389 aa16.11■□□□□ 0.17
NRXN1-233ENST00000630543 USP44Q9H0E7 712 aa16.11■□□□□ 0.17
NRXN1-233ENST00000630543 C3P01024 1663 aa16.11■□□□□ 0.17
NRXN1-233ENST00000630543 KIF24Q5T7B8 1368 aa16.11■□□□□ 0.17
NRXN1-233ENST00000630543 WASHC4Q2M389 1173 aa16.11■□□□□ 0.17
NRXN1-233ENST00000630543 UPF3BQ9BZI7 483 aaKnown RBP16.11■□□□□ 0.17
NRXN1-233ENST00000630543 MAP2P11137 1827 aaKnown RBP16.1■□□□□ 0.17
NRXN1-233ENST00000630543 DDB1Q16531 1140 aa16.1■□□□□ 0.17
NRXN1-233ENST00000630543 TOMM22Q9NS69 142 aa16.1■□□□□ 0.17
NRXN1-233ENST00000630543 ALDH1L1O75891 902 aa16.09■□□□□ 0.17
NRXN1-233ENST00000630543 RABEP1Q15276 862 aa16.09■□□□□ 0.17
NRXN1-233ENST00000630543 BICC1Q9H694 974 aaKnown RBP16.09■□□□□ 0.17
NRXN1-233ENST00000630543 APPP05067 770 aa16.09■□□□□ 0.17
NRXN1-233ENST00000630543 BRPF1P55201 1214 aaPredicted RBP16.09■□□□□ 0.17
NRXN1-233ENST00000630543 FKBP4Q02790 459 aaKnown RBP eCLIP16.09■□□□□ 0.17
NRXN1-233ENST00000630543 HOXB7P09629 217 aa16.09■□□□□ 0.17
NRXN1-233ENST00000630543 LMBR1LQ6UX01 489 aa16.09■□□□□ 0.17
NRXN1-233ENST00000630543 CWC25Q9NXE8 425 aaPredicted RBP16.09■□□□□ 0.17
NRXN1-233ENST00000630543 GLRX3O76003 335 aaKnown RBP16.08■□□□□ 0.16
NRXN1-233ENST00000630543 CEP126Q9P2H0 1117 aa16.08■□□□□ 0.16
NRXN1-233ENST00000630543 TBC1D2BQ9UPU7 963 aa16.08■□□□□ 0.16
NRXN1-233ENST00000630543 TRMT112Q9UI30 125 aaKnown RBP16.08■□□□□ 0.16
NRXN1-233ENST00000630543 CYP27B1O15528 508 aa16.07■□□□□ 0.16
NRXN1-233ENST00000630543 DNTTIP2Q5QJE6 756 aaKnown RBP16.07■□□□□ 0.16
NRXN1-233ENST00000630543 K7ELQ4 463 aaPredicted RBP16.06■□□□□ 0.16
NRXN1-233ENST00000630543 SOS1Q07889 1333 aaPredicted RBP16.06■□□□□ 0.16
NRXN1-233ENST00000630543 ITSN1Q15811 1721 aa16.06■□□□□ 0.16
NRXN1-233ENST00000630543 PRIM1P49642 420 aaKnown RBP16.06■□□□□ 0.16
NRXN1-233ENST00000630543 DNAJC10Q8IXB1 793 aa16.06■□□□□ 0.16
NRXN1-233ENST00000630543 SUCLG2Q96I99 432 aa16.06■□□□□ 0.16
NRXN1-233ENST00000630543 LARP6Q9BRS8 491 aaKnown RBP16.06■□□□□ 0.16
NRXN1-233ENST00000630543 ECHDC1Q9NTX5 307 aa16.06■□□□□ 0.16
NRXN1-233ENST00000630543 WDR17Q8IZU2 1322 aa16.05■□□□□ 0.16
NRXN1-233ENST00000630543 TTC39AQ5SRH9 613 aa16.05■□□□□ 0.16
NRXN1-233ENST00000630543 VPS37DQ86XT2 251 aa16.05■□□□□ 0.16
NRXN1-233ENST00000630543 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.04■□□□□ 0.16
NRXN1-233ENST00000630543 KDM4FA0A1W2PPD8 638 aa16.04■□□□□ 0.16
NRXN1-233ENST00000630543 PLCB2Q00722 1185 aa16.04■□□□□ 0.16
NRXN1-233ENST00000630543 USP32Q8NFA0 1604 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms