RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 GOLGA6L9A6NEM1 432 aa15.27■□□□□ 0.03
SYNGAP1-208ENST00000629380 NEMFO60524 1076 aa15.26■□□□□ 0.03
SYNGAP1-208ENST00000629380 STK3Q13188 491 aa15.26■□□□□ 0.03
SYNGAP1-208ENST00000629380 CACNA2D4Q7Z3S7 1137 aa15.26■□□□□ 0.03
SYNGAP1-208ENST00000629380 PLVAPQ9BX97 442 aa15.26■□□□□ 0.03
SYNGAP1-208ENST00000629380 BIVM-ERCC5R4GMW8 1640 aa15.26■□□□□ 0.03
SYNGAP1-208ENST00000629380 FILIP1Q7Z7B0 1213 aa15.26■□□□□ 0.03
SYNGAP1-208ENST00000629380 IGHMBP2P38935 993 aaKnown RBP15.26■□□□□ 0.03
SYNGAP1-208ENST00000629380 MTHFSP49914 203 aa15.26■□□□□ 0.03
SYNGAP1-208ENST00000629380 SLF2Q8IX21 1173 aa15.26■□□□□ 0.03
SYNGAP1-208ENST00000629380 TTC12Q9H892 705 aaPredicted RBP15.26■□□□□ 0.03
SYNGAP1-208ENST00000629380 CTAGE5O15320 804 aa15.26■□□□□ 0.03
SYNGAP1-208ENST00000629380 STARD3NLO95772 234 aa15.26■□□□□ 0.03
SYNGAP1-208ENST00000629380 ZNF530Q6P9A1 599 aaPredicted RBP15.26■□□□□ 0.03
SYNGAP1-208ENST00000629380 PTPN23Q9H3S7 1636 aa15.25■□□□□ 0.03
SYNGAP1-208ENST00000629380 STXBP4Q6ZWJ1 553 aa15.25■□□□□ 0.03
SYNGAP1-208ENST00000629380 MRPS9P82933 396 aaKnown RBP15.25■□□□□ 0.03
SYNGAP1-208ENST00000629380 HDGFL1Q5TGJ6 251 aa15.25■□□□□ 0.03
SYNGAP1-208ENST00000629380 ANKS4BQ8N8V4 417 aa15.25■□□□□ 0.03
SYNGAP1-208ENST00000629380 AIDAQ96BJ3 306 aa15.25■□□□□ 0.03
SYNGAP1-208ENST00000629380 NSRP1Q9H0G5 558 aaKnown RBP15.25■□□□□ 0.03
SYNGAP1-208ENST00000629380 CCDC172P0C7W6 258 aa15.25■□□□□ 0.03
SYNGAP1-208ENST00000629380 CASTP20810 708 aaKnown RBP15.25■□□□□ 0.03
SYNGAP1-208ENST00000629380 NUP88Q99567 741 aaPredicted RBP15.25■□□□□ 0.03
SYNGAP1-208ENST00000629380 STMN4Q9H169 189 aaPredicted RBP15.25■□□□□ 0.03
SYNGAP1-208ENST00000629380 MSH6P52701 1360 aa15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 PTPN14Q15678 1187 aa15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 CTR9Q6PD62 1173 aa15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 DDX54Q8TDD1 881 aaKnown RBP15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 TOM1O60784 492 aa15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 CCDC12Q8WUD4 166 aaPredicted RBP15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 SH2B1Q9NRF2 756 aaPredicted RBP15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 YEATS4O95619 227 aa15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 PPP1R14CQ8TAE6 165 aa15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 SCAND2PQ9GZW5 306 aaPredicted RBP15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 FKBP4Q02790 459 aaKnown RBP eCLIP15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 RAB3IL1Q8TBN0 382 aa15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 LRP2BPQ9P2M1 347 aa15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 MACROD2A1Z1Q3 448 aa15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 IFI16Q16666 785 aaKnown RBP15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 PCF11O94913 1555 aaKnown RBP15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 CCDC183Q5T5S1 534 aa15.24■□□□□ 0.03
SYNGAP1-208ENST00000629380 RASAL2Q9UJF2 1139 aa15.23■□□□□ 0.03
SYNGAP1-208ENST00000629380 URB2Q14146 1524 aaKnown RBP15.23■□□□□ 0.03
SYNGAP1-208ENST00000629380 CAVIN2O95810 425 aa15.23■□□□□ 0.03
SYNGAP1-208ENST00000629380 PAFAH1B1P43034 410 aa15.23■□□□□ 0.03
SYNGAP1-208ENST00000629380 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.23■□□□□ 0.03
SYNGAP1-208ENST00000629380 GSDMDP57764 484 aa15.23■□□□□ 0.03
SYNGAP1-208ENST00000629380 CADPS2Q86UW7 1296 aa15.23■□□□□ 0.03
SYNGAP1-208ENST00000629380 ACTN2P35609 894 aa15.23■□□□□ 0.03
SYNGAP1-208ENST00000629380 TWISTNBQ3B726 338 aaPredicted RBP15.23■□□□□ 0.03
SYNGAP1-208ENST00000629380 ANO10Q9NW15 660 aa15.22■□□□□ 0.03
SYNGAP1-208ENST00000629380 THOC2Q8NI27 1593 aaKnown RBP15.22■□□□□ 0.03
SYNGAP1-208ENST00000629380 RBM10P98175 930 aaKnown RBP15.22■□□□□ 0.03
SYNGAP1-208ENST00000629380 AKAP2Q9Y2D5 859 aa15.22■□□□□ 0.03
SYNGAP1-208ENST00000629380 HMGB1P1B2RPK0 211 aaPredicted RBP15.22■□□□□ 0.03
SYNGAP1-208ENST00000629380 TOP1P11387 765 aaKnown RBP15.22■□□□□ 0.03
SYNGAP1-208ENST00000629380 TICAM2Q86XR7 235 aa15.22■□□□□ 0.03
SYNGAP1-208ENST00000629380 CABP1Q9NZU7 370 aa15.22■□□□□ 0.03
SYNGAP1-208ENST00000629380 ZSCAN29Q8IWY8 852 aaPredicted RBP15.21■□□□□ 0.03
SYNGAP1-208ENST00000629380 GON4LQ3T8J9 2241 aa15.21■□□□□ 0.03
SYNGAP1-208ENST00000629380 DAAM2Q86T65 1068 aa15.21■□□□□ 0.03
SYNGAP1-208ENST00000629380 ZPR1O75312 459 aa15.21■□□□□ 0.03
SYNGAP1-208ENST00000629380 SEPT6Q14141 434 aa15.21■□□□□ 0.03
SYNGAP1-208ENST00000629380 CCDC61Q9Y6R9 512 aa15.21■□□□□ 0.03
SYNGAP1-208ENST00000629380 HMGB1P09429 215 aaKnown RBP15.21■□□□□ 0.03
SYNGAP1-208ENST00000629380 RAI14Q9P0K7 980 aa15.21■□□□□ 0.03
SYNGAP1-208ENST00000629380 RAPGEF6Q8TEU7 1601 aa15.21■□□□□ 0.03
SYNGAP1-208ENST00000629380 RNF187Q5TA31 235 aaPredicted RBP15.21■□□□□ 0.03
SYNGAP1-208ENST00000629380 CTTNBP2Q8WZ74 1663 aa15.21■□□□□ 0.03
SYNGAP1-208ENST00000629380 GOLIM4O00461 696 aa15.2■□□□□ 0.02
SYNGAP1-208ENST00000629380 BCCIPQ9P287 314 aaKnown RBP eCLIP15.2■□□□□ 0.02
SYNGAP1-208ENST00000629380 ZNF428Q96B54 188 aa15.2■□□□□ 0.02
SYNGAP1-208ENST00000629380 SIL1Q9H173 461 aa15.2■□□□□ 0.02
SYNGAP1-208ENST00000629380 NOB1Q9ULX3 412 aaKnown RBP15.2■□□□□ 0.02
SYNGAP1-208ENST00000629380 JAKMIP1Q96N16 626 aaKnown RBP15.2■□□□□ 0.02
SYNGAP1-208ENST00000629380 BMS1Q14692 1282 aaKnown RBP15.2■□□□□ 0.02
SYNGAP1-208ENST00000629380 NGLY1Q96IV0 654 aa15.2■□□□□ 0.02
SYNGAP1-208ENST00000629380 USP5P45974 858 aa15.2■□□□□ 0.02
SYNGAP1-208ENST00000629380 AMOTQ4VCS5 1084 aa15.2■□□□□ 0.02
SYNGAP1-208ENST00000629380 TIGD1Q96MW7 591 aa15.2■□□□□ 0.02
SYNGAP1-208ENST00000629380 STX1AQ16623 288 aa15.19■□□□□ 0.02
SYNGAP1-208ENST00000629380 ANAPC4Q9UJX5 808 aa15.19■□□□□ 0.02
SYNGAP1-208ENST00000629380 KIF21AQ7Z4S6 1674 aa15.19■□□□□ 0.02
SYNGAP1-208ENST00000629380 AMPD3Q01432 767 aa15.19■□□□□ 0.02
SYNGAP1-208ENST00000629380 IQCGQ9H095 443 aaKnown RBP15.19■□□□□ 0.02
SYNGAP1-208ENST00000629380 TMOD3Q9NYL9 352 aa15.19■□□□□ 0.02
SYNGAP1-208ENST00000629380 PRKAR2BP31323 418 aa15.19■□□□□ 0.02
SYNGAP1-208ENST00000629380 USP37Q86T82 979 aa15.19■□□□□ 0.02
SYNGAP1-208ENST00000629380 KIF5BP33176 963 aa15.19■□□□□ 0.02
SYNGAP1-208ENST00000629380 CRACR2BQ8N4Y2 399 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-208ENST00000629380 TBC1D5Q92609 795 aa15.19■□□□□ 0.02
SYNGAP1-208ENST00000629380 SLU7O95391 586 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-208ENST00000629380 UBA5Q9GZZ9 404 aa15.18■□□□□ 0.02
SYNGAP1-208ENST00000629380 TNRQ92752 1358 aa15.18■□□□□ 0.02
SYNGAP1-208ENST00000629380 RNF41Q9H4P4 317 aaPredicted RBP15.18■□□□□ 0.02
SYNGAP1-208ENST00000629380 ZSCAN30Q86W11 494 aa15.18■□□□□ 0.02
SYNGAP1-208ENST00000629380 RAB11FIP3O75154 756 aa15.18■□□□□ 0.02
SYNGAP1-208ENST00000629380 PRPHP41219 470 aa15.18■□□□□ 0.02
SYNGAP1-208ENST00000629380 NOL3O60936 208 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms