RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 VSIG10Q8N0Z9 540 aa14.73□□□□□ -0.05
DDX41-219ENST00000629036 AK7Q96M32 723 aa14.73□□□□□ -0.05
DDX41-219ENST00000629036 BRCA1P38398 1863 aaKnown RBP14.72□□□□□ -0.05
DDX41-219ENST00000629036 GRIN3BO60391 1043 aa14.72□□□□□ -0.05
DDX41-219ENST00000629036 SOS1Q07889 1333 aaPredicted RBP14.71□□□□□ -0.05
DDX41-219ENST00000629036 MAPK8IP3Q9UPT6 1336 aa14.71□□□□□ -0.05
DDX41-219ENST00000629036 RPS6KA4O75676 772 aa14.71□□□□□ -0.05
DDX41-219ENST00000629036 PNISRQ8TF01 805 aaKnown RBP14.71□□□□□ -0.05
DDX41-219ENST00000629036 RUNDC1Q96C34 613 aa14.71□□□□□ -0.05
DDX41-219ENST00000629036 TRIM35Q9UPQ4 493 aa14.71□□□□□ -0.05
DDX41-219ENST00000629036 HMGB2P26583 209 aaKnown RBP14.7□□□□□ -0.06
DDX41-219ENST00000629036 WDR43Q15061 677 aaKnown RBP eCLIP14.7□□□□□ -0.06
DDX41-219ENST00000629036 FLAD1Q8NFF5 587 aa14.7□□□□□ -0.06
DDX41-219ENST00000629036 RTF1Q92541 710 aaKnown RBP14.7□□□□□ -0.06
DDX41-219ENST00000629036 PNNQ9H307 717 aaKnown RBP14.7□□□□□ -0.06
DDX41-219ENST00000629036 PRAMEF22A3QJZ6 481 aa14.69□□□□□ -0.06
DDX41-219ENST00000629036 BTBD11A6QL63 1104 aa14.69□□□□□ -0.06
DDX41-219ENST00000629036 PHF14O94880 888 aa14.69□□□□□ -0.06
DDX41-219ENST00000629036 CCDC87Q9NVE4 849 aa14.69□□□□□ -0.06
DDX41-219ENST00000629036 ZBTB1Q9Y2K1 713 aa14.69□□□□□ -0.06
DDX41-219ENST00000629036 RRP7AQ9Y3A4 280 aaKnown RBP14.69□□□□□ -0.06
DDX41-219ENST00000629036 MSH5O43196 834 aa14.68□□□□□ -0.06
DDX41-219ENST00000629036 ANP32CO43423 234 aa14.68□□□□□ -0.06
DDX41-219ENST00000629036 ADRA2BP18089 450 aa14.68□□□□□ -0.06
DDX41-219ENST00000629036 RIPK4P57078 832 aa14.68□□□□□ -0.06
DDX41-219ENST00000629036 TAF7Q15545 349 aaPredicted RBP14.68□□□□□ -0.06
DDX41-219ENST00000629036 MSL1Q68DK7 614 aa14.68□□□□□ -0.06
DDX41-219ENST00000629036 CAPN15O75808 1086 aa14.67□□□□□ -0.06
DDX41-219ENST00000629036 TTC5Q8N0Z6 440 aa14.67□□□□□ -0.06
DDX41-219ENST00000629036 ARHGEF1Q92888 912 aaKnown RBP14.67□□□□□ -0.06
DDX41-219ENST00000629036 FMNL2Q96PY5 1086 aa14.67□□□□□ -0.06
DDX41-219ENST00000629036 MIS18AQ9NYP9 233 aa14.67□□□□□ -0.06
DDX41-219ENST00000629036 RTCBQ9Y3I0 505 aaKnown RBP14.67□□□□□ -0.06
DDX41-219ENST00000629036 COL15A1P39059 1388 aa14.67□□□□□ -0.06
DDX41-219ENST00000629036 ANKRD31Q8N7Z5 1873 aa14.67□□□□□ -0.06
DDX41-219ENST00000629036 USP42Q9H9J4 1324 aaKnown RBP14.66□□□□□ -0.06
DDX41-219ENST00000629036 NUP98P52948 1817 aa14.66□□□□□ -0.06
DDX41-219ENST00000629036 N4BP2Q86UW6 1770 aaPredicted RBP14.66□□□□□ -0.06
DDX41-219ENST00000629036 DLEC1Q9Y238 1755 aa14.66□□□□□ -0.06
DDX41-219ENST00000629036 NEFMP07197 916 aa14.65□□□□□ -0.06
DDX41-219ENST00000629036 GYS1P13807 737 aa14.65□□□□□ -0.06
DDX41-219ENST00000629036 EIF5P55010 431 aaKnown RBP14.65□□□□□ -0.06
DDX41-219ENST00000629036 APAF1O14727 1248 aa14.64□□□□□ -0.07
DDX41-219ENST00000629036 EIF4A1P60842 406 aaKnown RBP14.64□□□□□ -0.07
DDX41-219ENST00000629036 MRS2Q9HD23 443 aa14.64□□□□□ -0.07
DDX41-219ENST00000629036 SRP68Q9UHB9 627 aaKnown RBP14.64□□□□□ -0.07
DDX41-219ENST00000629036 WWC3Q9ULE0 1092 aa14.64□□□□□ -0.07
DDX41-219ENST00000629036 USP16Q9Y5T5 823 aa14.64□□□□□ -0.07
DDX41-219ENST00000629036 C10orf71Q711Q0 1435 aa14.64□□□□□ -0.07
DDX41-219ENST00000629036 ANKRD36CQ5JPF3 1778 aa14.63□□□□□ -0.07
DDX41-219ENST00000629036 TRAPPC3LQ5T215 181 aa14.63□□□□□ -0.07
DDX41-219ENST00000629036 BCL2L12Q9HB09 334 aa14.63□□□□□ -0.07
DDX41-219ENST00000629036 ADCY9O60503 1353 aa14.62□□□□□ -0.07
DDX41-219ENST00000629036 NBPF26B4DH59 902 aa14.62□□□□□ -0.07
DDX41-219ENST00000629036 CHL1O00533 1208 aa14.62□□□□□ -0.07
DDX41-219ENST00000629036 A1BGP04217 495 aa14.62□□□□□ -0.07
DDX41-219ENST00000629036 ZNF853P0CG23 659 aa14.62□□□□□ -0.07
DDX41-219ENST00000629036 COL11A2P13942 1736 aaPredicted RBP14.62□□□□□ -0.07
DDX41-219ENST00000629036 LMOD3Q0VAK6 560 aa14.62□□□□□ -0.07
DDX41-219ENST00000629036 NBPF10Q6P3W6 841 aaKnown RBP14.62□□□□□ -0.07
DDX41-219ENST00000629036 NBPF15Q8N660 670 aa14.62□□□□□ -0.07
DDX41-219ENST00000629036 BABAM1Q9NWV8 329 aa14.62□□□□□ -0.07
DDX41-219ENST00000629036 STARD3NLO95772 234 aa14.61□□□□□ -0.07
DDX41-219ENST00000629036 SNRPA1P09661 255 aaKnown RBP14.61□□□□□ -0.07
DDX41-219ENST00000629036 NEUROD2Q15784 382 aa14.61□□□□□ -0.07
DDX41-219ENST00000629036 TEX13AQ9BXU3 409 aaPredicted RBP14.61□□□□□ -0.07
DDX41-219ENST00000629036 DDR1Q08345 913 aa14.6□□□□□ -0.07
DDX41-219ENST00000629036 FKBP8Q14318 412 aa14.6□□□□□ -0.07
DDX41-219ENST00000629036 LRP10Q7Z4F1 713 aa14.6□□□□□ -0.07
DDX41-219ENST00000629036 NARFQ9UHQ1 456 aa14.6□□□□□ -0.07
DDX41-219ENST00000629036 WDR90Q96KV7 1748 aa14.6□□□□□ -0.07
DDX41-219ENST00000629036 ARFGEF1Q9Y6D6 1849 aa14.59□□□□□ -0.07
DDX41-219ENST00000629036 PXDNLA1KZ92 1463 aa14.59□□□□□ -0.07
DDX41-219ENST00000629036 MMP10P09238 476 aa14.59□□□□□ -0.07
DDX41-219ENST00000629036 CANXP27824 592 aaKnown RBP14.59□□□□□ -0.07
DDX41-219ENST00000629036 RFC4P35249 363 aa14.59□□□□□ -0.07
DDX41-219ENST00000629036 IL6STP40189 918 aaPredicted RBP14.59□□□□□ -0.07
DDX41-219ENST00000629036 PIP4K2AP48426 406 aaPredicted RBP14.59□□□□□ -0.07
DDX41-219ENST00000629036 TSPYL4Q9UJ04 414 aa14.59□□□□□ -0.07
DDX41-219ENST00000629036 KIF3CO14782 793 aa14.58□□□□□ -0.08
DDX41-219ENST00000629036 TM4SF1P30408 202 aa14.58□□□□□ -0.08
DDX41-219ENST00000629036 APLP1P51693 650 aa14.58□□□□□ -0.08
DDX41-219ENST00000629036 KRT24Q2M2I5 525 aa14.58□□□□□ -0.08
DDX41-219ENST00000629036 USPL1Q5W0Q7 1092 aa14.58□□□□□ -0.08
DDX41-219ENST00000629036 ARFGEF2Q9Y6D5 1785 aa14.57□□□□□ -0.08
DDX41-219ENST00000629036 CAMTA2O94983 1202 aa14.57□□□□□ -0.08
DDX41-219ENST00000629036 CCDC27Q2M243 656 aa14.57□□□□□ -0.08
DDX41-219ENST00000629036 NCBP3Q53F19 620 aaKnown RBP14.57□□□□□ -0.08
DDX41-219ENST00000629036 COL13A1Q5TAT6 717 aaPredicted RBP14.57□□□□□ -0.08
DDX41-219ENST00000629036 NLGN1Q8N2Q7 840 aa14.57□□□□□ -0.08
DDX41-219ENST00000629036 CACNA1FO60840 1977 aa14.56□□□□□ -0.08
DDX41-219ENST00000629036 POLRMTO00411 1230 aaKnown RBP14.56□□□□□ -0.08
DDX41-219ENST00000629036 PDIA6Q15084 440 aa14.56□□□□□ -0.08
DDX41-219ENST00000629036 DNAJC5GQ8N7S2 189 aa14.56□□□□□ -0.08
DDX41-219ENST00000629036 CFAP44Q96MT7 982 aa14.56□□□□□ -0.08
DDX41-219ENST00000629036 TNRC6CQ9HCJ0 1690 aaKnown RBP14.55□□□□□ -0.08
DDX41-219ENST00000629036 CACNA1SQ13698 1873 aa14.55□□□□□ -0.08
DDX41-219ENST00000629036 NFIXQ14938 502 aa14.55□□□□□ -0.08
DDX41-219ENST00000629036 MBIPQ9NS73 344 aa14.55□□□□□ -0.08
DDX41-219ENST00000629036 CD2APQ9Y5K6 639 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms