RNA–Protein interactions for RNA: ENST00000628549.1

UBE2A-207, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 2 BASIC

Gene UBE2A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-207ENST00000628549 NEUROD2Q15784 382 aa34.41■■■■□ 3.1
UBE2A-207ENST00000628549 THUMPD2Q9BTF0 503 aaKnown RBP34.41■■■■□ 3.1
UBE2A-207ENST00000628549 MRS2Q9HD23 443 aa34.4■■■■□ 3.1
UBE2A-207ENST00000628549 RRP7AQ9Y3A4 280 aaKnown RBP34.4■■■■□ 3.1
UBE2A-207ENST00000628549 KLHL34Q8N239 644 aa34.39■■■■□ 3.1
UBE2A-207ENST00000628549 SOS1Q07889 1333 aaPredicted RBP34.38■■■■□ 3.09
UBE2A-207ENST00000628549 DCAF8L1A6NGE4 600 aa34.38■■■■□ 3.09
UBE2A-207ENST00000628549 SNRPA1P09661 255 aaKnown RBP34.38■■■■□ 3.09
UBE2A-207ENST00000628549 NLGN1Q8N2Q7 840 aa34.38■■■■□ 3.09
UBE2A-207ENST00000628549 ZBTB1Q9Y2K1 713 aa34.38■■■■□ 3.09
UBE2A-207ENST00000628549 SYT17Q9BSW7 474 aa34.37■■■■□ 3.09
UBE2A-207ENST00000628549 MIS18AQ9NYP9 233 aa34.36■■■■□ 3.09
UBE2A-207ENST00000628549 CANXP27824 592 aaKnown RBP34.35■■■■□ 3.09
UBE2A-207ENST00000628549 CCDC184Q52MB2 194 aa34.35■■■■□ 3.09
UBE2A-207ENST00000628549 NPM2Q86SE8 214 aaKnown RBP34.35■■■■□ 3.09
UBE2A-207ENST00000628549 LAMB4A4D0S4 1761 aa34.35■■■■□ 3.09
UBE2A-207ENST00000628549 COL15A1P39059 1388 aa34.35■■■■□ 3.09
UBE2A-207ENST00000628549 ZPR1O75312 459 aa34.34■■■■□ 3.09
UBE2A-207ENST00000628549 USP42Q9H9J4 1324 aaKnown RBP34.33■■■■□ 3.09
UBE2A-207ENST00000628549 A0A087WZG4 1122 aa34.32■■■■□ 3.08
UBE2A-207ENST00000628549 GYS1P13807 737 aa34.32■■■■□ 3.08
UBE2A-207ENST00000628549 BABAM1Q9NWV8 329 aa34.32■■■■□ 3.08
UBE2A-207ENST00000628549 TSPYL4Q9UJ04 414 aa34.32■■■■□ 3.08
UBE2A-207ENST00000628549 APAF1O14727 1248 aa34.29■■■■□ 3.08
UBE2A-207ENST00000628549 MMP10P09238 476 aa34.29■■■■□ 3.08
UBE2A-207ENST00000628549 IL6STP40189 918 aaPredicted RBP34.28■■■■□ 3.08
UBE2A-207ENST00000628549 SRP68Q9UHB9 627 aaKnown RBP34.28■■■■□ 3.08
UBE2A-207ENST00000628549 TRIM35Q9UPQ4 493 aa34.28■■■■□ 3.08
UBE2A-207ENST00000628549 ZNF330Q9Y3S2 320 aaPredicted RBP34.28■■■■□ 3.08
UBE2A-207ENST00000628549 USP16Q9Y5T5 823 aa34.28■■■■□ 3.08
UBE2A-207ENST00000628549 EIF5P55010 431 aaKnown RBP34.27■■■■□ 3.08
UBE2A-207ENST00000628549 NARFQ9UHQ1 456 aa34.27■■■■□ 3.08
UBE2A-207ENST00000628549 A1BGP04217 495 aa34.26■■■■□ 3.08
UBE2A-207ENST00000628549 EIF4A1P60842 406 aaKnown RBP34.26■■■■□ 3.08
UBE2A-207ENST00000628549 USPL1Q5W0Q7 1092 aa34.25■■■■□ 3.07
UBE2A-207ENST00000628549 CD2APQ9Y5K6 639 aa34.25■■■■□ 3.07
UBE2A-207ENST00000628549 PARP3Q9Y6F1 533 aa34.25■■■■□ 3.07
UBE2A-207ENST00000628549 PRAMEF22A3QJZ6 481 aa34.24■■■■□ 3.07
UBE2A-207ENST00000628549 CALD1Q05682 793 aaKnown RBP34.23■■■■□ 3.07
UBE2A-207ENST00000628549 GIGYF1O75420 1035 aaPredicted RBP34.22■■■■□ 3.07
UBE2A-207ENST00000628549 LAS1LQ9Y4W2 734 aaKnown RBP34.22■■■■□ 3.07
UBE2A-207ENST00000628549 FKBP8Q14318 412 aa34.21■■■■□ 3.07
UBE2A-207ENST00000628549 SCN7AQ01118 1682 aa34.21■■■■□ 3.07
UBE2A-207ENST00000628549 KIF13BQ9NQT8 1826 aa34.18■■■■□ 3.06
UBE2A-207ENST00000628549 CHL1O00533 1208 aa34.17■■■■□ 3.06
UBE2A-207ENST00000628549 BCORQ6W2J9 1755 aa34.16■■■■□ 3.06
UBE2A-207ENST00000628549 NLGN2Q8NFZ4 835 aa34.16■■■■□ 3.06
UBE2A-207ENST00000628549 TBC1D2BQ9UPU7 963 aa34.15■■■■□ 3.06
UBE2A-207ENST00000628549 PIP4K2AP48426 406 aaPredicted RBP34.14■■■■□ 3.06
UBE2A-207ENST00000628549 DZIP3Q86Y13 1208 aaKnown RBP34.14■■■■□ 3.06
UBE2A-207ENST00000628549 CFAP44Q96MT7 982 aa34.14■■■■□ 3.06
UBE2A-207ENST00000628549 AFDNP55196 1824 aaKnown RBP34.11■■■■□ 3.05
UBE2A-207ENST00000628549 ERBB4Q15303 1308 aa34.11■■■■□ 3.05
UBE2A-207ENST00000628549 TM4SF1P30408 202 aa34.11■■■■□ 3.05
UBE2A-207ENST00000628549 GNAI1P63096 354 aa34.11■■■■□ 3.05
UBE2A-207ENST00000628549 NBPF26B4DH59 902 aa34.1■■■■□ 3.05
UBE2A-207ENST00000628549 DDR1Q08345 913 aa34.1■■■■□ 3.05
UBE2A-207ENST00000628549 GPR162Q16538 588 aa34.1■■■■□ 3.05
UBE2A-207ENST00000628549 NBPF10Q6P3W6 841 aaKnown RBP34.1■■■■□ 3.05
UBE2A-207ENST00000628549 FAM9BQ8IZU0 186 aa34.1■■■■□ 3.05
UBE2A-207ENST00000628549 NBPF15Q8N660 670 aa34.1■■■■□ 3.05
UBE2A-207ENST00000628549 BCL2L12Q9HB09 334 aa34.1■■■■□ 3.05
UBE2A-207ENST00000628549 IFT57Q9NWB7 429 aa34.1■■■■□ 3.05
UBE2A-207ENST00000628549 C10orf71Q711Q0 1435 aa34.1■■■■□ 3.05
UBE2A-207ENST00000628549 NFIXQ14938 502 aa34.09■■■■□ 3.05
UBE2A-207ENST00000628549 PELP1Q8IZL8 1130 aaKnown RBP34.09■■■■□ 3.05
UBE2A-207ENST00000628549 ZNF652Q9Y2D9 606 aa34.09■■■■□ 3.05
UBE2A-207ENST00000628549 POLRMTO00411 1230 aaKnown RBP34.08■■■■□ 3.05
UBE2A-207ENST00000628549 CCDC27Q2M243 656 aa34.08■■■■□ 3.05
UBE2A-207ENST00000628549 NCBP3Q53F19 620 aaKnown RBP34.08■■■■□ 3.05
UBE2A-207ENST00000628549 CAMTA2O94983 1202 aa34.07■■■■□ 3.04
UBE2A-207ENST00000628549 EIF2S2P20042 333 aaKnown RBP34.06■■■■□ 3.04
UBE2A-207ENST00000628549 BICDL1Q6ZP65 573 aa34.06■■■■□ 3.04
UBE2A-207ENST00000628549 TGFB2P61812 414 aa34.05■■■■□ 3.04
UBE2A-207ENST00000628549 N4BP2Q86UW6 1770 aaPredicted RBP34.05■■■■□ 3.04
UBE2A-207ENST00000628549 NRXN2Q9P2S2 1712 aa34.04■■■■□ 3.04
UBE2A-207ENST00000628549 MBIPQ9NS73 344 aa34.04■■■■□ 3.04
UBE2A-207ENST00000628549 CHD4Q14839 1912 aa34.03■■■■□ 3.04
UBE2A-207ENST00000628549 RGL2O15211 777 aa34.03■■■■□ 3.04
UBE2A-207ENST00000628549 ZNF853P0CG23 659 aa34.03■■■■□ 3.04
UBE2A-207ENST00000628549 MYL6BP14649 208 aa34.03■■■■□ 3.04
UBE2A-207ENST00000628549 CLEC4GQ6UXB4 293 aa34.03■■■■□ 3.04
UBE2A-207ENST00000628549 SERPINB2P05120 415 aa34.02■■■■□ 3.04
UBE2A-207ENST00000628549 HOXB7P09629 217 aa34.02■■■■□ 3.04
UBE2A-207ENST00000628549 TBC1D9BQ66K14 1250 aa34.02■■■■□ 3.04
UBE2A-207ENST00000628549 KIF6Q6ZMV9 814 aa34.02■■■■□ 3.04
UBE2A-207ENST00000628549 NGEFQ8N5V2 710 aa34.02■■■■□ 3.04
UBE2A-207ENST00000628549 CARMIL3Q8ND23 1372 aa34.01■■■■□ 3.04
UBE2A-207ENST00000628549 SETDB2Q96T68 719 aa34.01■■■■□ 3.03
UBE2A-207ENST00000628549 KIAA1551Q9HCM1 1747 aa34.01■■■■□ 3.03
UBE2A-207ENST00000628549 NUP98P52948 1817 aa34■■■■□ 3.03
UBE2A-207ENST00000628549 WWC1Q8IX03 1113 aa34■■■■□ 3.03
UBE2A-207ENST00000628549 PXDNLA1KZ92 1463 aa34■■■■□ 3.03
UBE2A-207ENST00000628549 SENP3-EIF4A1A0A087X0R7 540 aa33.99■■■■□ 3.03
UBE2A-207ENST00000628549 GRIN3BO60391 1043 aa33.98■■■■□ 3.03
UBE2A-207ENST00000628549 NPHP1O15259 732 aa33.97■■■■□ 3.03
UBE2A-207ENST00000628549 KRT24Q2M2I5 525 aa33.97■■■■□ 3.03
UBE2A-207ENST00000628549 HDGFL1Q5TGJ6 251 aa33.96■■■■□ 3.03
UBE2A-207ENST00000628549 NECTIN2Q92692 538 aa33.96■■■■□ 3.03
UBE2A-207ENST00000628549 IL16Q14005 1332 aa33.96■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms