RNA–Protein interactions for RNA: ENST00000623495.1

LETMD1-238, Transcript of LETM1 domain containing 1, human

Gene LETMD1, Length 2,948 nt, Biotype TEC.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-238	ENST00000623495	TBC1D2B	Q9UPU7	963 aa		9.17	□□□□□ -0.94
LETMD1-238	ENST00000623495	KIF24	Q5T7B8	1368 aa		9.17	□□□□□ -0.94
LETMD1-238	ENST00000623495	NBPF14	Q5TI25	921 aa		9.17	□□□□□ -0.94
LETMD1-238	ENST00000623495	ZNF790	Q6PG37	636 aa		9.17	□□□□□ -0.94
LETMD1-238	ENST00000623495	USP16	Q9Y5T5	823 aa		9.17	□□□□□ -0.94
LETMD1-238	ENST00000623495	MKRN4P	Q13434	485 aa	Predicted RBP	9.16	□□□□□ -0.94
LETMD1-238	ENST00000623495	ITPK1	Q13572	414 aa		9.16	□□□□□ -0.94
LETMD1-238	ENST00000623495	ABCA3	Q99758	1704 aa		9.16	□□□□□ -0.94
LETMD1-238	ENST00000623495	TAF7	Q15545	349 aa	Predicted RBP	9.16	□□□□□ -0.94
LETMD1-238	ENST00000623495	SPINK5	Q9NQ38	1064 aa	Predicted RBP	9.16	□□□□□ -0.94
LETMD1-238	ENST00000623495	STK32B	Q9NY57	414 aa		9.16	□□□□□ -0.94
LETMD1-238	ENST00000623495	ZNF827	Q17R98	1081 aa		9.15	□□□□□ -0.94
LETMD1-238	ENST00000623495	B4GALNT3	Q6L9W6	998 aa		9.15	□□□□□ -0.94
LETMD1-238	ENST00000623495	AMIGO3	Q86WK7	504 aa		9.15	□□□□□ -0.94
LETMD1-238	ENST00000623495	NAP1L5	Q96NT1	182 aa	Predicted RBP	9.15	□□□□□ -0.94
LETMD1-238	ENST00000623495	TRIM35	Q9UPQ4	493 aa		9.15	□□□□□ -0.94
LETMD1-238	ENST00000623495	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	9.15	□□□□□ -0.94
LETMD1-238	ENST00000623495	SLC4A9	Q96Q91	983 aa		9.15	□□□□□ -0.94
LETMD1-238	ENST00000623495	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	9.15	□□□□□ -0.94
LETMD1-238	ENST00000623495	RGPD2	P0DJD1	1756 aa		9.15	□□□□□ -0.94
LETMD1-238	ENST00000623495	WWC1	Q8IX03	1113 aa		9.15	□□□□□ -0.95
LETMD1-238	ENST00000623495	PDCL3	Q9H2J4	239 aa		9.15	□□□□□ -0.95
LETMD1-238	ENST00000623495	SRP68	Q9UHB9	627 aa	Known RBP	9.15	□□□□□ -0.95
LETMD1-238	ENST00000623495	ZBTB1	Q9Y2K1	713 aa		9.15	□□□□□ -0.95
LETMD1-238	ENST00000623495	KDR	P35968	1356 aa		9.14	□□□□□ -0.95
LETMD1-238	ENST00000623495	LINC00116	Q8NCU8	138 aa		9.14	□□□□□ -0.95
LETMD1-238	ENST00000623495	CAMKK2	Q96RR4	588 aa		9.14	□□□□□ -0.95
LETMD1-238	ENST00000623495	DISP2	A7MBM2	1401 aa		9.14	□□□□□ -0.95
LETMD1-238	ENST00000623495	KDM6A	O15550	1401 aa	Predicted RBP	9.14	□□□□□ -0.95
LETMD1-238	ENST00000623495	LMO7	Q8WWI1	1683 aa		9.14	□□□□□ -0.95
LETMD1-238	ENST00000623495	TSPYL6	Q8N831	410 aa		9.14	□□□□□ -0.95
LETMD1-238	ENST00000623495	ZBTB3	Q9H5J0	574 aa		9.14	□□□□□ -0.95
LETMD1-238	ENST00000623495	MBIP	Q9NS73	344 aa		9.14	□□□□□ -0.95
LETMD1-238	ENST00000623495	ERVV-2	B6SEH9	535 aa		9.13	□□□□□ -0.95
LETMD1-238	ENST00000623495	LMOD3	Q0VAK6	560 aa		9.13	□□□□□ -0.95
LETMD1-238	ENST00000623495	FMNL2	Q96PY5	1086 aa		9.13	□□□□□ -0.95
LETMD1-238	ENST00000623495	MARF1	Q9Y4F3	1742 aa	Known RBP	9.13	□□□□□ -0.95
LETMD1-238	ENST00000623495	SPDYE4	A6NLX3	237 aa		9.13	□□□□□ -0.95
LETMD1-238	ENST00000623495	GPT	P24298	496 aa		9.13	□□□□□ -0.95
LETMD1-238	ENST00000623495	RFC4	P35249	363 aa		9.13	□□□□□ -0.95
LETMD1-238	ENST00000623495	CRKL	P46109	303 aa	Known RBP	9.13	□□□□□ -0.95
LETMD1-238	ENST00000623495	NAP1L2	Q9ULW6	460 aa	Predicted RBP	9.13	□□□□□ -0.95
LETMD1-238	ENST00000623495	HDGFL1	Q5TGJ6	251 aa		9.12	□□□□□ -0.95
LETMD1-238	ENST00000623495	JARID2	Q92833	1246 aa	Predicted RBP	9.12	□□□□□ -0.95
LETMD1-238	ENST00000623495	SMARCC1	Q92922	1105 aa	Predicted RBP	9.12	□□□□□ -0.95
LETMD1-238	ENST00000623495	RRAGD	Q9NQL2	400 aa	Predicted RBP	9.12	□□□□□ -0.95
LETMD1-238	ENST00000623495	EXOSC9	Q06265	439 aa	Known RBP	9.12	□□□□□ -0.95
LETMD1-238	ENST00000623495	C8orf58	Q8NAV2	365 aa		9.12	□□□□□ -0.95
LETMD1-238	ENST00000623495	DDRGK1	Q96HY6	314 aa		9.12	□□□□□ -0.95
LETMD1-238	ENST00000623495	RTCB	Q9Y3I0	505 aa	Known RBP	9.12	□□□□□ -0.95
LETMD1-238	ENST00000623495	STARD3NL	O95772	234 aa		9.11	□□□□□ -0.95
LETMD1-238	ENST00000623495	COL3A1	P02461	1466 aa	Predicted RBP	9.11	□□□□□ -0.95
LETMD1-238	ENST00000623495	HOMEZ	Q8IX15	550 aa		9.11	□□□□□ -0.95
LETMD1-238	ENST00000623495	NCL	P19338	710 aa	Known RBP	9.11	□□□□□ -0.95
LETMD1-238	ENST00000623495	GTF2E1	P29083	439 aa	Predicted RBP	9.11	□□□□□ -0.95
LETMD1-238	ENST00000623495	CLCN1	P35523	988 aa		9.11	□□□□□ -0.95
LETMD1-238	ENST00000623495	SLC15A2	Q16348	729 aa		9.11	□□□□□ -0.95
LETMD1-238	ENST00000623495	IFNLR1	Q8IU57	520 aa	Predicted RBP	9.11	□□□□□ -0.95
LETMD1-238	ENST00000623495	COL18A1	P39060	1754 aa		9.11	□□□□□ -0.95
LETMD1-238	ENST00000623495	NFKBIB	Q15653	356 aa		9.11	□□□□□ -0.95
LETMD1-238	ENST00000623495	PROSER3	Q2NL68	480 aa		9.11	□□□□□ -0.95
LETMD1-238	ENST00000623495	DUSP27	Q5VZP5	1158 aa		9.11	□□□□□ -0.95
LETMD1-238	ENST00000623495	SLC4A10	Q6U841	1118 aa		9.11	□□□□□ -0.95
LETMD1-238	ENST00000623495	IPO4	Q8TEX9	1081 aa	Known RBP	9.11	□□□□□ -0.95
LETMD1-238	ENST00000623495	NKX1-1	Q15270	411 aa	Predicted RBP	9.1	□□□□□ -0.95
LETMD1-238	ENST00000623495	CRYBG1	Q9Y4K1	1723 aa		9.1	□□□□□ -0.95
LETMD1-238	ENST00000623495	ZPR1	O75312	459 aa		9.1	□□□□□ -0.95
LETMD1-238	ENST00000623495	SNRPA1	P09661	255 aa	Known RBP	9.1	□□□□□ -0.95
LETMD1-238	ENST00000623495	GOLGA2	Q08379	1002 aa		9.1	□□□□□ -0.95
LETMD1-238	ENST00000623495	TRAPPC3L	Q5T215	181 aa		9.1	□□□□□ -0.95
LETMD1-238	ENST00000623495	CCDC125	Q86Z20	511 aa		9.1	□□□□□ -0.95
LETMD1-238	ENST00000623495	BBX	Q8WY36	941 aa	Predicted RBP	9.1	□□□□□ -0.95
LETMD1-238	ENST00000623495	CLUAP1	Q96AJ1	413 aa		9.1	□□□□□ -0.95
LETMD1-238	ENST00000623495	CCDC85A	Q96PX6	553 aa	Predicted RBP	9.1	□□□□□ -0.95
LETMD1-238	ENST00000623495	CHPF2	Q9P2E5	772 aa		9.1	□□□□□ -0.95
LETMD1-238	ENST00000623495	PLSCR1	O15162	318 aa		9.09	□□□□□ -0.95
LETMD1-238	ENST00000623495	COL23A1	Q86Y22	540 aa	Predicted RBP	9.09	□□□□□ -0.95
LETMD1-238	ENST00000623495	NRAP	Q86VF7	1730 aa		9.09	□□□□□ -0.95
LETMD1-238	ENST00000623495	ATP5J2-PTCD1	G3V325	749 aa		9.09	□□□□□ -0.95
LETMD1-238	ENST00000623495	TPM2	P07951	284 aa		9.09	□□□□□ -0.95
LETMD1-238	ENST00000623495	USPL1	Q5W0Q7	1092 aa		9.09	□□□□□ -0.95
LETMD1-238	ENST00000623495	BCL9	O00512	1426 aa		9.09	□□□□□ -0.95
LETMD1-238	ENST00000623495	GNAI1	P63096	354 aa		9.08	□□□□□ -0.96
LETMD1-238	ENST00000623495	TWISTNB	Q3B726	338 aa	Predicted RBP	9.08	□□□□□ -0.96
LETMD1-238	ENST00000623495	ARHGEF1	Q92888	912 aa	Known RBP	9.08	□□□□□ -0.96
LETMD1-238	ENST00000623495	VASP	P50552	380 aa	Predicted RBP	9.08	□□□□□ -0.96
LETMD1-238	ENST00000623495	EIF4A1	P60842	406 aa	Known RBP	9.08	□□□□□ -0.96
LETMD1-238	ENST00000623495	L1TD1	Q5T7N2	865 aa	Known RBP	9.08	□□□□□ -0.96
LETMD1-238	ENST00000623495	CFAP44	Q96MT7	982 aa		9.08	□□□□□ -0.96
LETMD1-238	ENST00000623495	PHAX	Q9H814	394 aa	Known RBP	9.08	□□□□□ -0.96
LETMD1-238	ENST00000623495	CCDC87	Q9NVE4	849 aa		9.08	□□□□□ -0.96
LETMD1-238	ENST00000623495	NWD2	Q9ULI1	1742 aa		9.08	□□□□□ -0.96
LETMD1-238	ENST00000623495	TTLL7	Q6ZT98	887 aa		9.08	□□□□□ -0.96
LETMD1-238	ENST00000623495	GIGYF1	O75420	1035 aa	Predicted RBP	9.07	□□□□□ -0.96
LETMD1-238	ENST00000623495	RGS3	P49796	1198 aa		9.07	□□□□□ -0.96
LETMD1-238	ENST00000623495	COPS6	Q7L5N1	327 aa		9.07	□□□□□ -0.96
LETMD1-238	ENST00000623495	STK31	Q9BXU1	1019 aa		9.07	□□□□□ -0.96
LETMD1-238	ENST00000623495	BRWD3	Q6RI45	1802 aa		9.07	□□□□□ -0.96
LETMD1-238	ENST00000623495		F6X3S4	739 aa		9.07	□□□□□ -0.96
LETMD1-238	ENST00000623495	FKBP5	Q13451	457 aa	Predicted RBP	9.07	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms