RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 TRIM6-TRIM34B2RNG4 842 aa10.18□□□□□ -0.78
SND1-IT1-201ENST00000623342 SURF6O75683 361 aaKnown RBP10.18□□□□□ -0.78
SND1-IT1-201ENST00000623342 NBPF7P0C2Y1 421 aaPredicted RBP10.18□□□□□ -0.78
SND1-IT1-201ENST00000623342 GZF1Q9H116 711 aaPredicted RBP10.18□□□□□ -0.78
SND1-IT1-201ENST00000623342 ADCY9O60503 1353 aa10.18□□□□□ -0.78
SND1-IT1-201ENST00000623342 LMTK3Q96Q04 1460 aa10.18□□□□□ -0.78
SND1-IT1-201ENST00000623342 HEG1Q9ULI3 1381 aa10.18□□□□□ -0.78
SND1-IT1-201ENST00000623342 GOLGA6L3A6NEY3 463 aa10.18□□□□□ -0.78
SND1-IT1-201ENST00000623342 SRGAP3O43295 1099 aa10.18□□□□□ -0.78
SND1-IT1-201ENST00000623342 GIGYF1O75420 1035 aaPredicted RBP10.18□□□□□ -0.78
SND1-IT1-201ENST00000623342 CHMLP26374 656 aa10.18□□□□□ -0.78
SND1-IT1-201ENST00000623342 RILPL2Q969X0 211 aa10.18□□□□□ -0.78
SND1-IT1-201ENST00000623342 FSD2A1L4K1 749 aa10.17□□□□□ -0.78
SND1-IT1-201ENST00000623342 ANXA1P04083 346 aa10.17□□□□□ -0.78
SND1-IT1-201ENST00000623342 SKOR2Q2VWA4 1001 aaPredicted RBP10.17□□□□□ -0.78
SND1-IT1-201ENST00000623342 CLEC17AQ6ZS10 378 aa10.17□□□□□ -0.78
SND1-IT1-201ENST00000623342 IL1RAPL2Q9NP60 686 aa10.17□□□□□ -0.78
SND1-IT1-201ENST00000623342 MCCP23508 829 aa10.17□□□□□ -0.78
SND1-IT1-201ENST00000623342 SSFA2P28290 1259 aa10.17□□□□□ -0.78
SND1-IT1-201ENST00000623342 RHPN1Q8TCX5 695 aa10.17□□□□□ -0.78
SND1-IT1-201ENST00000623342 KIF1BPQ96EK5 621 aa10.17□□□□□ -0.78
SND1-IT1-201ENST00000623342 ALS2Q96Q42 1657 aa10.17□□□□□ -0.78
SND1-IT1-201ENST00000623342 ERBB3P21860 1342 aa10.17□□□□□ -0.78
SND1-IT1-201ENST00000623342 SIPA1L3O60292 1781 aaPredicted RBP10.17□□□□□ -0.78
SND1-IT1-201ENST00000623342 ADAMTS7Q9UKP4 1686 aa10.16□□□□□ -0.78
SND1-IT1-201ENST00000623342 NUCB2P80303 420 aa10.16□□□□□ -0.78
SND1-IT1-201ENST00000623342 HSP90AB4PQ58FF6 505 aa10.16□□□□□ -0.78
SND1-IT1-201ENST00000623342 CWC22Q9HCG8 908 aaKnown RBP10.16□□□□□ -0.78
SND1-IT1-201ENST00000623342 TMEM94Q12767 1356 aa10.16□□□□□ -0.78
SND1-IT1-201ENST00000623342 ALDH1L1O75891 902 aa10.16□□□□□ -0.78
SND1-IT1-201ENST00000623342 ZC3H6P61129 1189 aaKnown RBP10.16□□□□□ -0.78
SND1-IT1-201ENST00000623342 KSR2Q6VAB6 950 aa10.16□□□□□ -0.78
SND1-IT1-201ENST00000623342 NUTM1Q86Y26 1132 aa10.16□□□□□ -0.78
SND1-IT1-201ENST00000623342 MAP3K2Q9Y2U5 619 aa10.16□□□□□ -0.78
SND1-IT1-201ENST00000623342 RGPD5Q99666 1765 aa10.16□□□□□ -0.78
SND1-IT1-201ENST00000623342 GOLGA6L22H0YM25 854 aa10.15□□□□□ -0.78
SND1-IT1-201ENST00000623342 ATF3P18847 181 aa10.15□□□□□ -0.78
SND1-IT1-201ENST00000623342 ANAPC15P60006 121 aa10.15□□□□□ -0.78
SND1-IT1-201ENST00000623342 UNC5CLQ8IV45 518 aa10.15□□□□□ -0.78
SND1-IT1-201ENST00000623342 HYPKQ9NX55 129 aa10.15□□□□□ -0.78
SND1-IT1-201ENST00000623342 HDAC5Q9UQL6 1122 aa10.15□□□□□ -0.78
SND1-IT1-201ENST00000623342 XIRP1Q702N8 1843 aaKnown RBP10.15□□□□□ -0.78
SND1-IT1-201ENST00000623342 STRCQ7RTU9 1775 aa10.15□□□□□ -0.78
SND1-IT1-201ENST00000623342 EPB41L2O43491 1005 aaKnown RBP10.15□□□□□ -0.78
SND1-IT1-201ENST00000623342 MTX1Q13505 466 aa10.15□□□□□ -0.78
SND1-IT1-201ENST00000623342 PROSER3Q2NL68 480 aa10.15□□□□□ -0.78
SND1-IT1-201ENST00000623342 CABLES1Q8TDN4 633 aa10.15□□□□□ -0.78
SND1-IT1-201ENST00000623342 RAPGEF4Q8WZA2 1011 aa10.15□□□□□ -0.78
SND1-IT1-201ENST00000623342 ANO2Q9NQ90 1003 aa10.15□□□□□ -0.78
SND1-IT1-201ENST00000623342 MCM2P49736 904 aa10.14□□□□□ -0.79
SND1-IT1-201ENST00000623342 PI4K2BQ8TCG2 481 aa10.14□□□□□ -0.79
SND1-IT1-201ENST00000623342 RTN4Q9NQC3 1192 aaKnown RBP10.14□□□□□ -0.79
SND1-IT1-201ENST00000623342 C9orf78Q9NZ63 289 aaPredicted RBP10.14□□□□□ -0.79
SND1-IT1-201ENST00000623342 PRAMEF22A3QJZ6 481 aa10.14□□□□□ -0.79
SND1-IT1-201ENST00000623342 BAG4O95429 457 aaKnown RBP10.14□□□□□ -0.79
SND1-IT1-201ENST00000623342 CYP2E1P05181 493 aaPredicted RBP10.14□□□□□ -0.79
SND1-IT1-201ENST00000623342 NEK4P51957 841 aa10.14□□□□□ -0.79
SND1-IT1-201ENST00000623342 ISY1Q9ULR0 285 aaKnown RBP10.14□□□□□ -0.79
SND1-IT1-201ENST00000623342 DCCP43146 1447 aa10.14□□□□□ -0.79
SND1-IT1-201ENST00000623342 DDX58O95786 925 aaKnown RBP10.13□□□□□ -0.79
SND1-IT1-201ENST00000623342 XRCC6P12956 609 aaKnown RBP eCLIP10.13□□□□□ -0.79
SND1-IT1-201ENST00000623342 IL17RAQ96F46 866 aa10.13□□□□□ -0.79
SND1-IT1-201ENST00000623342 DDX21Q9NR30 783 aaKnown RBP eCLIP10.13□□□□□ -0.79
SND1-IT1-201ENST00000623342 NLRP2Q9NX02 1062 aa10.13□□□□□ -0.79
SND1-IT1-201ENST00000623342 TATP17735 454 aaPredicted RBP10.13□□□□□ -0.79
SND1-IT1-201ENST00000623342 MRE11P49959 708 aa10.13□□□□□ -0.79
SND1-IT1-201ENST00000623342 OS9Q13438 667 aaPredicted RBP10.13□□□□□ -0.79
SND1-IT1-201ENST00000623342 SPG7Q9UQ90 795 aa10.13□□□□□ -0.79
SND1-IT1-201ENST00000623342 USP42Q9H9J4 1324 aaKnown RBP10.13□□□□□ -0.79
SND1-IT1-201ENST00000623342 ZNF790Q6PG37 636 aa10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 CNTROBQ8N137 903 aa10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 ZGPATQ8N5A5 531 aaKnown RBP10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 LINS1Q8NG48 757 aa10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 ARXQ96QS3 562 aa10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 SLC52A2Q9HAB3 445 aa10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 PALD1Q9ULE6 856 aa10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 TTC41PQ6P2S7 1318 aa10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 NPHP3Q7Z494 1330 aa10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 ZNF335Q9H4Z2 1342 aaPredicted RBP10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 ABCC6O95255 1503 aa10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 PHKG2P15735 406 aa10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 CWF19L2Q2TBE0 894 aaKnown RBP10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 ERC1Q8IUD2 1116 aa10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 KDM6AO15550 1401 aaPredicted RBP10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 SCN11AQ9UI33 1791 aa10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 AK9Q5TCS8 1911 aa10.12□□□□□ -0.79
SND1-IT1-201ENST00000623342 PLEKHG2Q9H7P9 1386 aa10.11□□□□□ -0.79
SND1-IT1-201ENST00000623342 UTYO14607 1347 aa10.11□□□□□ -0.79
SND1-IT1-201ENST00000623342 MAP4K4O95819 1239 aaPredicted RBP10.11□□□□□ -0.79
SND1-IT1-201ENST00000623342 PDIA6Q15084 440 aa10.11□□□□□ -0.79
SND1-IT1-201ENST00000623342 CLASRPQ8N2M8 674 aaKnown RBP10.11□□□□□ -0.79
SND1-IT1-201ENST00000623342 TMX3Q96JJ7 454 aa10.11□□□□□ -0.79
SND1-IT1-201ENST00000623342 COL18A1P39060 1754 aa10.11□□□□□ -0.79
SND1-IT1-201ENST00000623342 GRM8O00222 908 aa10.11□□□□□ -0.79
SND1-IT1-201ENST00000623342 GLRX3O76003 335 aaKnown RBP10.11□□□□□ -0.79
SND1-IT1-201ENST00000623342 IFNL2Q8IZJ0 200 aa10.11□□□□□ -0.79
SND1-IT1-201ENST00000623342 MEGF6O75095 1541 aa10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 SGSM2O43147 1006 aa10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 CSB-PGBD3P0DP91 1061 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms